keyword
https://read.qxmd.com/read/38701414/metabolic-models-predict-fotemustine-and-the-combination-of-eflornithine-rifamycin-and-adapalene-cannabidiol-for-the-treatment-of-gliomas
#21
JOURNAL ARTICLE
Ali Kishk, Maria Pires Pacheco, Tony Heurtaux, Thomas Sauter
Gliomas are the most common type of malignant brain tumors, with glioblastoma multiforme (GBM) having a median survival of 15 months due to drug resistance and relapse. The treatment of gliomas relies on surgery, radiotherapy and chemotherapy. Only 12 anti-brain tumor chemotherapies (AntiBCs), mostly alkylating agents, have been approved so far. Glioma subtype-specific metabolic models were reconstructed to simulate metabolite exchanges, in silico knockouts and the prediction of drug and drug combinations for all three subtypes...
March 27, 2024: Briefings in Bioinformatics
https://read.qxmd.com/read/38699024/exploring-the-mechanism-of-huanglian-ointment-in-alleviating-wound-healing-after-anal-fistula-surgery-through-metabolomics-and-proteomics
#22
JOURNAL ARTICLE
Dongliang Zhang, Jiabo Gu, Yanyan Xu, Xiaowen Yu, Heiying Jin
Anal fistula is a common anal and intestinal disease. The wound of anal fistula surgery is open and polluting, which is the most difficult to heal among all surgical incisions. To investigate the mechanism of Huanglian ointment (HLO) on wound healing after anal fistula incision. The S. aureus infected wound in SD rats were used to imitate poor healing wound after anal fistula surgery. SD rats with wound sites (n = 24) were randomly divided into four groups (Control group, Model group, Potassium permanganate (PP) treatment group, and HLO treatment group)...
May 15, 2024: Heliyon
https://read.qxmd.com/read/38696867/role-of-plant-neurotransmitters-in-salt-stress-a-critical-review
#23
REVIEW
Paheli Malakar, Santosh K Gupta, Debasis Chattopadhyay
Neurotransmitters are naturally found in many plants, but the molecular processes that govern their actions still need to be better understood. Acetylcholine, γ-Aminobutyric acid, histamine, melatonin, serotonin, and glutamate are the most common neurotransmitters in animals, and they all play a part in the development and information processing. It is worth noting that all these chemicals have been found in plants. Although much emphasis has been placed on understanding how neurotransmitters regulate mood and behaviour in humans, little is known about how they regulate plant growth and development...
April 8, 2024: Plant Physiology and Biochemistry: PPB
https://read.qxmd.com/read/38696478/parvalbumin-regulates-gad-expression-through-calcium-ion-concentration-to-affect-the-balance-of-glu-gaba-and-improve-ka-induced-status-epilepticus-in-pv-cre-transgenic-mice
#24
JOURNAL ARTICLE
Chunmei Zeng, Yuling Lu, Xing Wei, Lanfeng Sun, Lei Wei, Sijie Ou, Qi Huang, Yuan Wu
Aims: the study aimed to (i) use adeno-associated virus technology to modulate parvalbumin (PV) gene expression, both through overexpression and silencing, within the hippocampus of male mice and (ii) assess the impact of PV on the metabolic pathway of glutamate and γ-aminobutyric acid (GABA). Methods: a status epilepticus (SE) mouse model was established by injecting kainic acid into the hippocampus of transgenic mice. When the seizures of mice reached SE, the mice were killed at that time point and 30 min after the onset of SE...
May 2, 2024: ACS Chemical Neuroscience
https://read.qxmd.com/read/38696389/identification-and-characterization-of-a-bacterial-periplasmic-solute-binding-protein-that-binds-l-amino-acid-amides
#25
JOURNAL ARTICLE
Oliver B Smith, Rebecca L Frkic, Marina G Rahman, Colin J Jackson, Joe A Kaczmarski
Periplasmic solute-binding proteins (SBPs) are key ligand recognition components of bacterial ATP-binding cassette (ABC) transporters that allow bacteria to import nutrients and metabolic precursors from the environment. Periplasmic SBPs comprise a large and diverse family of proteins, of which only a small number have been empirically characterized. In this work, we identify a set of 610 unique uncharacterized proteins within the SBP_bac_5 family that are found in conserved operons comprising genes encoding (i) ABC transport systems and (ii) putative amidases from the FmdA_AmdA family...
May 2, 2024: Biochemistry
https://read.qxmd.com/read/38696385/screening-of-amino-acids-as-a-safe-energy-source-for-isolated-rat-pancreatic-acini
#26
JOURNAL ARTICLE
Anastasiia M Zub, Bohdan O Manko, Volodymyr V Manko
OBJECTIVES: Amino acids play an essential role in protein synthesis, metabolism and survival of pancreatic acini. Adequate nutritional support is important for acute pancreatitis treatment. However, high concentrations of arginine and lysine may induce acute pancreatitis. The study aimed to identify the most suitable L-amino acids as safe energy sources for pancreatic acinar cells. METHODS: Pancreatic acini were isolated from male Wistar rats. Effects of amino acids (0...
May 1, 2024: Pancreas
https://read.qxmd.com/read/38696064/effects-of-the-ampar-antagonist-perampanel-on-cognitive-function-in-rats-exposed-to-neonatal-iron-overload
#27
JOURNAL ARTICLE
José da Silva, Lariza Oliveira de Souza, Maria Paula Arakaki Severo, Sarah Luize Camargo Rodrigues, Patrícia Molz, Patrícia Schonhofen, Alice Laschuk Herlinger, Nadja Schröder
Iron accumulation has been associated with the pathogenesis of neurodegenerative diseases and memory decline. As previously described by our research group, iron overload in the neonatal period induces persistent memory deficits and increases oxidative stress and apoptotic markers. The neuronal insult caused by iron excess generates an energetic imbalance that can alter glutamate concentrations and thus trigger excitotoxicity. Drugs that block glutamatergic receptor eligibly mitigate neurotoxicity; among them is perampanel (PER), a reversible AMPA receptor (AMPAR) antagonist...
May 2, 2024: Molecular Neurobiology
https://read.qxmd.com/read/38694089/associations-among-plasma-markers-for-n-methyl-d-aspartate-receptor-hypofunction-redox-dysregulation-and-insufficient-myelination-in-patients-with-schizophrenia
#28
JOURNAL ARTICLE
Yoshiaki Isomura, Mikiko Ohno, Satoshi Sudo, Mayuko Ono, Yuki Kaminishi, Yukiyoshi Sumi, Atsushi Yoshimura, Kumiko Fujii, Kazufumi Akiyama, Eiichiro Nishi, Yuji Ozeki
BACKGROUND: Several hypotheses regarding the pathomechanisms of schizophrenia have been proposed. If schizophrenia is a unitary disease, then these pathological processes must be linked; however, if such links do not exist, schizophrenia may best be considered a group of disorders. Only a few studies have examined the relationships among these pathomechanisms. Herein, we examined the relationships among deficient myelination, NMDA receptor hypofunction, and metabolic dysregulation by measuring various plasma markers and examining their correlations...
May 15, 2024: Heliyon
https://read.qxmd.com/read/38693848/biochemical-characterization-and-metabolic-reprogramming-of-amino-acids-in-soybean-roots-under-drought-stress
#29
JOURNAL ARTICLE
Xiyue Wang, Xiaomei Li, Shoukun Dong
Amino acids play important roles in stress resistance, plant growth, development, and quality, with roots serving as the primary organs for drought response. We conducted biochemical and multi-omics analyses to investigate the metabolic processes of root amino acids in drought-resistant (HN44) and drought-sensitive (HN65) soybean (Glycine max) varieties. Our analysis revealed an increase in total amino acid content in both varieties, with phenylalanine, proline, and methionine accumulating in both. Additionally, several amino acids exhibited significant decreases in HN65 but slight increases in HN44...
2024: Physiologia Plantarum
https://read.qxmd.com/read/38693144/a-patient-based-ipsc-derived-hepatocyte-model-of-alcohol-associated-cirrhosis-reveals-bioenergetic-insights-into-disease-pathogenesis
#30
JOURNAL ARTICLE
Bani Mukhopadhyay, Cheryl Marietta, Pei-Hong Shen, Abdul Oiseni, Faridoddin Mirshahi, Maria Mazzu, Colin Hodgkinson, Eli Winkler, Qiaoping Yuan, Daniel Miranda, George Kunos, Arun J Sanyal, David Goldman
Only ~20% of heavy drinkers develop alcohol cirrhosis (AC). While differences in metabolism, inflammation, signaling, microbiome signatures and genetic variations have been tied to the pathogenesis of AC, the key underlying mechanisms for this interindividual variability, remain to be fully elucidated. Induced pluripotent stem cell-derived hepatocytes (iHLCs) from patients with AC and healthy controls differ transcriptomically, bioenergetically and histologically. They include a greater number of lipid droplets (LDs) and LD-associated mitochondria compared to control cells...
May 1, 2024: Nature Communications
https://read.qxmd.com/read/38690938/hyperglycemia-impairs-eaat2-glutamate-transporter-trafficking-and-glutamate-clearance-in-islets-of-langerhans-implications-for-type-2-diabetes-pathogenesis
#31
JOURNAL ARTICLE
Alessandra Galli, Stefania Moretti, Nevia Dule, Eliana Sara Di Cairano, Michela Castagna, Paola Marciani, Cristina Battaglia, Federico Bertuzzi, Ida Pastore, Paolo Fiorina, Stefano La Rosa, Alberto Davalli, Franco Folli, Carla Perego
Pancreatic endocrine cells employ a sophisticated system of paracrine and autocrine signals to synchronize their activities, including glutamate which controls hormone release and β-cell viability by acting on glutamate receptors expressed by endocrine cells. We here investigate whether alteration of the Excitatory Amino Acid Transporter 2 (EAAT2), the major glutamate clearance system in the islet, may occur in type 2 diabetes mellitus (T2DM) and contribute to β-cell dysfunction. Increased EAAT2 intracellular localization was evident in islets of Langerhans from T2DM subjects as compared with healthy control subjects, despite similar expression levels...
May 1, 2024: American Journal of Physiology. Endocrinology and Metabolism
https://read.qxmd.com/read/38690580/metabolism-dependent-secondary-effect-of-anti-mapk-cancer-therapy-on-dna-repair
#32
JOURNAL ARTICLE
Fabien Aubé, Nicolas Fontrodona, Laura Guiguettaz, Elodie Vallin, Lucilla Fabbri, Audrey Lapendry, Stephan Vagner, Emiliano P Ricci, Didier Auboeuf
Amino acid bioavailability impacts mRNA translation in a codon-dependent manner. Here, we report that the anti-cancer MAPK inhibitors (MAPKi) decrease the intracellular concentration of aspartate and glutamate in melanoma cells. This coincides with the accumulation of ribosomes on codons corresponding to these amino acids and triggers the translation-dependent degradation of mRNAs encoding aspartate- and glutamate-rich proteins, involved in DNA metabolism such as DNA replication and repair. Consequently, cells that survive MAPKi degrade aspartate and glutamate likely to generate energy, which simultaneously decreases their requirement for amino acids due to the downregulation of aspartate- and glutamate-rich proteins involved in cell proliferation...
June 2024: NAR cancer
https://read.qxmd.com/read/38690510/gray-matter-gamma-hydroxy-butyric-acid-and-glutamate-reflect-beta-amyloid-burden-at-old-age
#33
JOURNAL ARTICLE
Simon J Schreiner, Jiri M G Van Bergen, Anton F Gietl, Alfred Buck, Christoph Hock, Klaas P Pruessmann, Anke Henning, Paul G Unschuld
UNLABELLED: Gamma-hydroxy-butyric acid (GABA) and glutamate are neurotransmitters with essential importance for cognitive processing. Here, we investigate relationships between GABA, glutamate, and brain ß-amyloid (Aß) burden before clinical manifestation of Alzheimer's disease (AD). Thirty cognitively healthy adults (age 69.9 ± 6 years) received high-resolution atlas-based 1 H-magnetic resonance spectroscopic imaging (MRSI) at ultra-high magnetic field strength of 7 Tesla for gray matter-specific assessment of GABA and glutamate...
2024: Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring
https://read.qxmd.com/read/38689532/purification-and-characterization-of-glutamate-dehydrogenase-from-rainbow-trout-oncorhynchus-mykiss-liver-and-molecular-docking-studies
#34
JOURNAL ARTICLE
Onur Ertik, Refiye Yanardag
Glutamate dehydrogenase (GDH) participates in the energy metabolism of proteins and the synthesis of metabolites important for the organism. In this study, GDH enzyme was purified from the liver of rainbow trout (Oncorhynchus mykiss) by 2',5'-ADP Sepharose 4B affinity chromatography in one step. As a result of this purification process, GDH enzyme was purified 171-fold with 5.83 U/mg protein-specific activity. The characterization experiments presented that the storage stability of the purified GDH enzyme was determined as -80°C; optimum temperature 40°C; it was determined that the optimum ionic strength was 100 mM phosphate buffer and the optimum pH was 8...
April 30, 2024: Biotechnology and Applied Biochemistry
https://read.qxmd.com/read/38687603/cervicovaginal-metabolome-and-tumor-characteristics-for-endometrial-cancer-detection-and-risk-stratification
#35
JOURNAL ARTICLE
Georgia M Lorentzen, Pawel Laniewski, Haiyan Cui, Nichole D Mahnert, Jamal Mourad, Matthew P Borst, Lyndsay Willmott, Dana M Chase, Denise J Roe, Melissa M Herbst-Kralovetz
PURPOSE: Endometrial cancer is highly prevalent and lacking non-invasive diagnostic techniques. Diagnosis depends on histological investigation of biopsy samples. Serum biomarkers for endometrial cancer have lacked sensitivity and specificity. The objective of this study was to investigate the cervicovaginal environment to improve understanding of metabolic reprogramming related to endometrial cancer and identify potential biomarker candidates for non-invasive diagnostic and prognostic tests...
April 30, 2024: Clinical Cancer Research
https://read.qxmd.com/read/38685873/biallelic-variants-of-mrps36-cause-a-new-form-of-leigh-syndrome
#36
JOURNAL ARTICLE
Serena Galosi, Cecilia Mancini, Anna Commone, Paolo Calligari, Viviana Caputo, Francesca Nardecchia, Claudia Carducci, Lambertus P van den Heuvel, Simone Pizzi, Alessandro Bruselles, Marcello Niceta, Simone Martinelli, Richard J Rodenburg, Marco Tartaglia, Vincenzo Leuzzi
BACKGROUND: The MRPS36 gene encodes a recently identified component of the 2-oxoglutarate dehydrogenase complex (OGDHC), a key enzyme of the Krebs cycle catalyzing the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA. Defective OGDHC activity causes a clinically variable metabolic disorder characterized by global developmental delay, severe neurological impairment, liver failure, and early-onset lactic acidosis. METHODS: We investigated the molecular cause underlying Leigh syndrome with bilateral striatal necrosis in two siblings through exome sequencing...
April 30, 2024: Movement Disorders: Official Journal of the Movement Disorder Society
https://read.qxmd.com/read/38685761/anti-viral-effects-of-pavetta-indica-methanolic-extract-and-acyclovir-on-behavioral-and-biochemical-parameters-in-streptozotocin-induced-alzheimer-s-disease-in-rats
#37
JOURNAL ARTICLE
Deepak Kumar, Govind Singh, Tarun, Meenakshi Dhanawat, Sumeet Gupta, Mohamed A Morsy, Anroop B Nair, Asmaa I Matouk
BACKGROUND: Alzheimer's disease is a neurological dysfunction of the brain caused by neurodegeneration and oxidative stress. Some viruses, such as herpes viruses, HSV-1, and HSV-2, are causative agents of Alzheimer's disease and result in β-amyloid peptide and tau protein accumulation in the brain. Some antiviral drugs, such as valacyclovir, acyclovir, and foscarnet, reduce amyloid-beta and P-tau. Pavetta indica leaves are also reported for their antiviral properties. The current study aimed to find out the significance of using Pavetta indica methanolic extract and acyclovir against Alzheimer's disease induced by streptozotocin...
April 27, 2024: Endocrine, Metabolic & Immune Disorders Drug Targets
https://read.qxmd.com/read/38684795/integrative-metabolomics-genomics-analysis-identifies-key-networks-in-a-stem-cell-based-model-of-schizophrenia
#38
JOURNAL ARTICLE
Angeliki Spathopoulou, Gabriella A Sauerwein, Valentin Marteau, Martina Podlesnic, Theresa Lindlbauer, Tobias Kipura, Madlen Hotze, Elisa Gabassi, Katharina Kruszewski, Marja Koskuvi, János M Réthelyi, Ágota Apáti, Luciano Conti, Manching Ku, Therese Koal, Udo Müller, Radu A Talmazan, Ilkka Ojansuu, Olli Vaurio, Markku Lähteenvuo, Šárka Lehtonen, Jerome Mertens, Marcel Kwiatkowski, Katharina Günther, Jari Tiihonen, Jari Koistinaho, Zlatko Trajanoski, Frank Edenhofer
Schizophrenia (SCZ) is a neuropsychiatric disorder, caused by a combination of genetic and environmental factors. The etiology behind the disorder remains elusive although it is hypothesized to be associated with the aberrant response to neurotransmitters, such as dopamine and glutamate. Therefore, investigating the link between dysregulated metabolites and distorted neurodevelopment holds promise to offer valuable insights into the underlying mechanism of this complex disorder. In this study, we aimed to explore a presumed correlation between the transcriptome and the metabolome in a SCZ model based on patient-derived induced pluripotent stem cells (iPSCs)...
April 29, 2024: Molecular Psychiatry
https://read.qxmd.com/read/38684219/dynamic-neuroreceptor-positron-emission-tomography-in-non-anesthetized-rats-using-point-source-based-motion-correction-a-feasibility-study-with-11-c-abp688
#39
JOURNAL ARTICLE
Tina Kroll, Alan Miranda, Alexandra Drechsel, Simone Beer, Markus Lang, Alexander Drzezga, Pedro Rosa-Neto, Jeroen Verhaeghe, David Elmenhorst, Andreas Bauer
To prevent motion artifacts in small animal positron emission tomography (PET), animals are routinely scanned under anesthesia or physical restraint. Both may potentially alter metabolism and neurochemistry. This study investigates the feasibility of fully awake acquisition and subsequent absolute quantification of dynamic brain PET data via pharmacokinetic modelling in moving rats using the glutamate 5 receptor radioligand [11 C]ABP688 and point source based motion correction. Five male rats underwent three dynamic [11 C]ABP688 PET scans: two test-retest awake PET scans and one scan under anesthesia for comparison...
April 29, 2024: Journal of Cerebral Blood Flow and Metabolism
https://read.qxmd.com/read/38683978/neuronal-innervation-regulates-the-secretion-of-neurotrophic-myokines-and-exosomes-from-skeletal-muscle
#40
JOURNAL ARTICLE
Kai-Yu Huang, Gaurav Upadhyay, Yujin Ahn, Masayoshoi Sakakura, Gelson J Pagan-Diaz, Younghak Cho, Amanda C Weiss, Chen Huang, Jennifer W Mitchell, Jiahui Li, Yanqi Tan, Yu-Heng Deng, Austin Ellis-Mohr, Zhi Dou, Xiaotain Zhang, Sehong Kang, Qian Chen, Jonathan V Sweedler, Sung Gap Im, Rashid Bashir, Hee Jung Chung, Gabriel Popescu, Martha U Gillette, Mattia Gazzola, Hyunjoon Kong
Myokines and exosomes, originating from skeletal muscle, are shown to play a significant role in maintaining brain homeostasis. While exercise has been reported to promote muscle secretion, little is known about the effects of neuronal innervation and activity on the yield and molecular composition of biologically active molecules from muscle. As neuromuscular diseases and disabilities associated with denervation impact muscle metabolism, we hypothesize that neuronal innervation and firing may play a pivotal role in regulating secretion activities of skeletal muscles...
May 7, 2024: Proceedings of the National Academy of Sciences of the United States of America
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