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https://www.readbyqxmd.com/read/27902352/cohnella-lubricantis-sp-nov-isolated-from-a-coolant-lubricant-solution
#1
Peter Kämpfer, Stefanie P Glaeser, Hans-Jürgen Busse
A Gram-staining-positive, aerobic, non-endospore forming organism, isolated from a coolant lubricant solution was studied for its taxonomic position. On the basis of 16S rRNA gene sequence similarity comparisons, strain KSS-154-50T was grouped into the genus Cohnella, most closely related to Cohnella formosensis ALFALFA-35T (97.3 %), Cohnella rhizosphaerae CSE-5610T (97.1 %) and Cohnella nanjingensis D-45T (97.0%). The 16S rRNA gene sequence similarity to other Cohnella species was < 97.0 %. The fatty acid profile from whole cell hydrolysates was very similar to those reported for other Cohnella species supported the allocation to the genus Cohnella...
November 9, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902316/echinicola-strongylocentroti-sp-nov-isolated-from-a-sea-urchin-strongylocentrotus-intermedius
#2
You-Jung Jung, Sung Hyun Yang, Kae Kyung Kwon, Seung Seob Bae
A yellowish-orange-pigmented marine bacterium, designated MEBiC08714T was isolated from a sea urchin Strongylocentrotus intermedius collected at the west edge of the East Sea of Korea. Phylogenetic analysis based on the 16S rRNA gene sequences indicated that strain MEBiC08714T was affiliated with the genus Echinicola and showed that the strain was most closely related to Echinicola vietnamensis KCTC 12713T (96.9%) and followed by 'E. shivajiensis' JCM 17847T (96.3%), E. jeungdonensis KCTC 23122T (96.1%), and E...
November 24, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902310/paenibacillus-silvae-sp-nov-isolated-from-tropical-rainforest-soil
#3
Huiqin Huang, Fute Zhang, Min Liu, Ying Cui, Qianguang Sun, Jun Zhu, Xiaoxiao Zou, Shixiang Bao
Two Gram-stain-positive, facultatively aerobic, endospore-forming and rod-shaped bacteria, designated DB13031T and DB13311, were isolated from soil of Jiaxi Nature Reserve in Hainan, China. 16S rRNA gene analysis of the strains DB13031T and DB13311 showed that they were within the Paenibacillus cluster, with the highest similarities of Paenibacillus cucumis AP-115T (98.4 % and 98.3 %, respectively), Paenibacillus barcinonensis BP-23T (98.3 % and 98.2 %, respectively) and Paenibacillus oceanisediminis L10T (97...
October 25, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902287/runella-palustris-sp-nov-isolated-from-wetland-freshwater
#4
Haneul Kim, Heeyoung Kang, Yochan Joung, Kiseong Joh
A novel, Gram-stain-negative, aerobic, non-motile and filamentous bacterial strain, designated HMF3829T, was isolated from wetland freshwater in Gyeong-an wetland, Republic of Korea. A phylogenetic tree based on 16S rRNA gene sequences showed that strain HMF3829T formed a lineage within the genus Runella. Strain HMF3829T was closely related to Runella slithyformis DSM 19594T (95.2 % sequence similarity), R. limosa DSM 17973T (94.9 %), R. zeae NS12T (94.2 %) and R. defluvii EMB13T (94.0 %). The major fatty acids of strain HMF3829T were iso-C15:0 (26...
November 24, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902277/pedobacter-zeae-sp-nov-an-endophytic-bacterium-isolated-from-maize-root
#5
Jun-Lian Gao, Pengbo Sun, Xiao-Jie Mao, Yan-Li Du, Bing-Yan Liu, Jian-Guang Sun
A novel Gram-staining-negative, aerobic, non-motile by gliding and rod-shaped strain designated 22T was isolated from surface-sterilized root tissue of maize planted in the Fangshan District of Beijing, People's Republic of China. The highest levels of 16S rRNA gene sequence similarity were found with respect to Pedobacter suwonensis15-52T (97.5 %), Pedobacter terrae DS-57T (97.1 %) and Pedobacter alluvionis NWER-II11T (97.0 %). Phylogenetic analysis based on 16S rRNA gene sequence data indicated that strain 22T is a member of the genus Pedobacter...
October 25, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902264/hymenobacter-seoulensis-sp-nov-isolated-from-river-water
#6
Jae-Jin Lee, Yeon-Hee Lee, Su-Jin Park, Seung-Yeol Lee, Sangkyu Park, Myung Kyum Kim, Leonid N Ten, Hee-Young Jung
A Gram-stain-negative, aerobic, rod-shaped, nonmotile and pink pigmented bacterial strain, designated 16F7GT, was isolated from river water. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain 16F7GT belongs to the genus Hymenobacter. The 16S rRNA gene sequence similarity to members of the genus Hymenobacter ranged from 90.5 to 97.4%, and the most closely related strains were Hymenobacter rigui WPCB131T (97.4%) and Hymenobacter xinjiangensis X2-1gT (97.3%). Strain 16F7GT had <70% DNA-DNA relatedness with H...
November 16, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902263/terrimonas-rhizosphaerae-sp-nov-isolated-from-ginseng-rhizosphere-soil
#7
Song-Ih Han, Ye-Rim Lee, Ju-Ok Kim, Kyung-Sook Whang
The novel isolate belonging to the genus Terrimonas, designated CR94T, was isolated from rhizosphere soil of ginseng field in Geumsan in Korea. Cells of Strain CR94T were strictly aerobic, Gram staining negative, non-motile, non-filamentous single rods. Growth was observed at 10-37℃ (optimum 28℃) and at pH4.0-10.0 (optimum pH6.0). Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain CR94T belonged to the genus Terrimonas, showing the highest sequence similarity to Terrimonas lutea DYT (97...
November 2, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902261/paenibacillus-qinlingensis-sp-nov-an-indole-3-acetic%C3%A2-acid-producing-bacterium-isolated-from-roots-of-sinopodophyllum%C3%A2-hexandrum-royle-ying
#8
Kaiyun Xin, Muhang Li, Chaoqiong Chen, Xu Yang, Qiqi Li, Juanli Cheng, Lei Zhang, Xihui Shen
A novel indole-3-acetic acid-producing bacterium, designated TEGT-2T, was isolated from the roots of Sinopodophyllum hexandrum collected from Qinling Mountains in shaanxi province, Northwestern China, and was subjected to a taxonomic study by using a polyphasic approach. Cells of strain TEGT-2T were Gram-stain-positive, strictly aerobic, endospore-forming rods and motile by means of peritrichous flagella. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain TEGT-2T was a member of the genus Paenibacillus, exhibiting the highest sequence similarity to Paenibacillus pectinilyticus KCTC 13222T (97...
November 16, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902259/olivibacter-composti-sp-nov-isolated-from-compost-collected-at-a-greenhouse
#9
Shih-Yao Lin, Asif Hameed, Kai-Yeh Chiu, You-Cheng Liu, Yi-Han Hsu, Wei-An Lai, Chiu-Chung Young
A polyphasic approach was used to characterize a presumably novel bacterium, designated strain CC-KYC063T, isolated from a compost sample collected at a greenhouse facility within Taiwan. Strain CC-KYC063T was Gram-staining-negative and aerobic, able to grow at 15-37 ºС (optimal 30 ºС), pH 7.0-9.0 (optimal pH 7.0) and salinity (0-2 %, w/v). The 16S rRNA gene sequence analysis of strain CC-KYC063T showed highest sequence similarity to Olivibacter ginsengisoli Gsoil 060T (96.2 %) and Olivibacter terrae Jip13T (95...
October 21, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902253/labilibacter-aurantiacus-gen-nov-sp-nov-isolated-from-sea-squirt-styela-clava-and-reclassification-of-saccharicrinis-marinus-as-labilibacter-marinus-comb-nov
#10
De-Chen Lu, Jin-Xin Zhao, Feng-Qing Wang, Zhi-Hong Xie, Zong-Jun Du
A Gram-stain-negative, facultatively anaerobic, orange-pigmented bacterium, designated HQYD1T, was isolated from a sea squirt (Styela clava) and characterized using a polyphasic approach. Morphologically, strain HQYD1T exhibited rods with gliding motility. This novel isolate grew optimally at 28 °C in the presence of 2-3 % (w/v) NaCl. The 16S rRNA gene sequence was most similar to [Saccharicrinis] marinus Y11T (96.3 %), followed by S. fermentans DSM 9555T (93.8 %). The dominant fatty acids of strain HQYD1T were identified as C16:0, C18:0 and iso-C15:0...
November 9, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902252/flectobacillus-fontis-sp-nov-isolated-from-a-freshwater-spring
#11
Wen-Ming Chen, Kai-Rou Lin, Chiu-Chung Young, Shih-Yi Sheu
A bacterial strain, designated MIB-4T, was isolated from a freshwater spring in Taiwan and characterized using a polyphasic taxonomy approach. Cells of strain MIB-4T were Gram-staining-negative, aerobic, non-motile rods that formed pale pink-colored colonies. Growth occurred at 15-30 oC (optimum, 25 °C), at pH 7-8 (optimum, pH 7) and with 0-0.5 % NaCl (optimum, 0 %). Phylogenetic analyses based on 16S rRNA gene sequences showed that strain MIB-4T belonged to the genus Flectobacillus and was most closely related to Flectobacillus lacus CL-GP79T with sequence similarity of 98...
October 27, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902248/bacillus-maritimus-sp-nov-a-novel-member-of-the-genus-bacillus-isolated-from-marine-sediment
#12
Deepika Pal, Rajendran Mathan Kumar, Navjot Kaur, Narender Kumar, Gurwinder Kaur, Nitin Kumar Singh, Srinivasan Krishnamurthi, Shanmugam Mayilraj
The taxonomic position of a Gram-stain-positive, endo-spore forming bacterium strain KS16-9T isolated from marine sediment sample collected from Kovalam, Kanyakumari coastal region of Indian Ocean, India was analyzed by a polyphasic taxonomic approach. Strain KS16-9T had typical phenotypic characteristics and chemotaxonomic features like menaquinones, fatty acids and lipids that consistent with the genus Bacillus and comparative analysis of 16S rRNA gene sequence of the strain with previously studied Bacillus type strains confirmed that the strain belongs to the genus Bacillus and is moderately related to Bacillus persicus B48T showing 98...
October 12, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902239/mucilaginibacter-psychrotolerans-sp-nov-isolated-from-the-riganqiao-peatlands-on-the-tibetan-plateau
#13
Yongcui Deng, Liang Shen, Baiqin Xu, Yongqin Liu, Zhengquan Gu, Hongcan Liu, Yuguang Zhou
A Gram-stain-negative, rod-shaped without flagella, pink colored, cold-tolerate bacteria strain NH7-4T was isolated from Riganqiao peatlands on the Tibetan Plateau. The novel isolate was classified into the genus Mucilaginibacter. 16S rRNA gene sequence of the novel isolate shares a pairwise similarity ranging from 96.69% to 93.41% with the type strains of the genus Mucilaginibacter. Growth of strain NH7-4T occurred between 0 and 30 °C and at pH 5.0-9.0, with optimum at 20 °C and pH about 7.0. The major isoprenoid quinone is MK-7...
October 11, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902238/description-of-algoriphagus-iocasae-sp-nov-isolated-from-the-deep-sea-sediment-of-okinawa-trough
#14
Qing-Lei Sun, Li Sun
In this study, we reported the identification and species characterization of a novel Gram-staining-negative bacterium, strain S61T, isolated from the deep sea sediment in the Okinawa Trough. Growth of strain S61T occurred at 4-37 °C (optimum, 25 °C), pH 6.0-10.0 (optimum, 7.0), and with 0-8 % (w/v) NaCl (optimum, 2 %). Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain S61T belonged to the genus Algoriphagus. The closest phylogenetic neighbors of strain S61T were A. lutimaris S1-3T (98...
October 24, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902236/corticicoccus-populi-gen-nov-sp-nov-a-member-of-the-family-staphylococcaceae-isolated-from-symptomatic-bark-of-populus-%C3%A3-euramericana-canker
#15
Yong Li, Sheng-Kun Wang, Han Xue, Ju-Pu Chang, Li-Min Guo, Xu-Qi Yang
Two gram-stain positive, aerobic, non-motile, bacterial strains were isolated from symptomatic bark tissue of Populus × euramericana canker. The isolates were able to grow between 10 and 37°C, pH 6 to 10 and 0-4% (w/v) NaCl, with optimal growth at 28-30°C, pH 7.0-8.0 and 2% (w/v) NaCl The strains were found to be oxidase positive and catalase negative. The menaquinone of the 26D10-3-4T was found to be MK-7 and the peptidoglycan type A3α based on L-Lys-Gly3-?Ala. The polar lipid profiles of 26D10-3-4T showed diphosphatidylglycerol, phosphatidylglycerol, two unidentified phospholipids and three unidentified glycolipids; the major fatty acids found were anteiso-C15:0, iso-C15:0, iso-C17:0 and anteiso-C17:0...
October 24, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902234/lacibacter-nakdongensis-sp-nov-isolated-from-sediment-of-nakdong-river
#16
Ji-Hye Han, Kiwoon Baek, Mi-Hwa Lee
A novel Gram-negative, non-spore-forming, orange pigmented bacterium, designated strain SS2-56T, was isolated from sediment of the Nakdong River in Sangju-si, Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the isolate SS2-56T belongs to the family Chitinophagaceae, and was most closely related to the type strains of Lacibacter daechungensis H32-4T (96.6%) and Lacibacter cauensis NJ-8T (96.1%). Strain SS2-56T contained MK-7 as a respiratory quinone and iso-C15:0, iso-C17:0 3-OH, iso-C15:1 G, summed feature 3 (C16:1 ω7c and/or C16:1 ω6c), and C16:0 as major fatty acids...
November 2, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902231/kocuria-oceani-sp-nov-isolated-from-a-deep-sea-hydrothermal-plume
#17
Limin Zhang, Lijun Xi, Jisheng Ruan, Ying Huang
Three strains, FXJ8.095T, FXJ8.057 and H201 were isolated from deep-sea hydrothermal plume water collected at the Southwest Indian Ridge at a depth of 2800 m. Phylogenetic analysis based on 16S rRNA gene sequences showed that the isolates formed a closely related subcluster within the genus Kocuria. The 16S rRNA gene sequence of strain FXJ8.095T presented 99.90 and 99.60% similarities to those of the strains FXJ8.057 and H201, respectively, and 98.81, 98.75, 98.68 and 98.10% to those of 'Kocuria sediminis' JCM 17929, Kocuria flava HO-9041T, Kocuria turfanensis HO-9042T and Kocuria rosea JCM 11614T, respectively...
October 24, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902223/bacillus-capparidis-sp-nov-a-novel-endophytic-bacterium-isolated-from-roots-of-capparis-spinosa-l
#18
Hong-Fei Wang, Qiu-Li Li, Yong-Guang Zhang, Min Xiao, Xing-Kui Zhou, Jian-Wei Guo, Yan-Qing Duan, Wen-Jun Li
A novel endophytic bacterium, designated strain EGI 6500252T, was isolated from the surface-sterilized roots of medicinal plant (Capparis spinosa L.) collected from Urumqi city, Xinjiang, north-west of China. Cells were Gram-staining-positive, non-motile, aerobic, catalase- and oxidase-positive, rod-shaped and did not display spore formation. Strain EGI 6500252T grew at 10-40 °C (optimum 25-30 °C) and pH 6.0-8.0 (optimum pH 7.0), and in the presence of 0-10 % NaCl (w/v) (optimum 0-3 %). The major cellular fatty acids (> 10 %) were identified as iso-C15:0, anteiso-C15:0, anteiso-C17:0 and Sum In feature 4...
October 26, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902213/virgibacillus-jeotgali-sp-nov-isolated-from-myeolchi-jeotgal-a-traditional-korean-high-salt-fermented-anchovy
#19
Aravind Sundararaman, Sathiyaraj Srinivasan, Jong-Hoon Lee, Sang-Seob Lee
A Gram-staining-positive, motile, endospore-forming, rod-shaped bacterium designated as NS3012T, was isolated from Myeolchi-jeotgal, a traditional Korean high-salt-fermented anchovy and was characterized using a polyphasic taxonomic approach. Comparative 16S rRNA gene sequence analysis showed that strain NS3012T belongs to genus Virgibacillus in the family Bacillaceae of the Firmicutes. The 16S rRNA gene sequence analysis showed that strain NS3012T closely related to Virgibacillus halotolerans WS-4627T (98...
October 24, 2016: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/27902208/lysinibacillus-alkalisoli-sp-nov-isolated-from-saline-alkaline-soil
#20
Ji-Quan Sun, Lian Xu, Xiao-Lei Wu
A Gram-staining-positive, aerobic bacterial strain, designated Y2A20T with peritrichous flagella was isolated from the top layer saline-alkaline soil, Hangjin Banner, Inner Mongolia, northern China. Phylogenetic analysis based on the 16S rRNA gene sequences revealed that strain Y2A20T formed a stable clade with 'Lysinibacillus jejuensis' N2-5T. Strain Y2A20T shared the highest 16S rRNA gene sequence similarity with 'L. jejuensis' N2-5T (97.4%), while lower 16S rRNA gene similarities with all other type strains (<97...
October 12, 2016: International Journal of Systematic and Evolutionary Microbiology
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