keyword
https://read.qxmd.com/read/37499362/an-electrochemical-biosensor-for-detection-of-t4-polynucleotide-kinase-activity-based-on-host-guest-recognition-between-phosphate-pillar-5-arene-and-methylene-blue
#21
JOURNAL ARTICLE
Dan Luo, Zaiqiong Liu, Aiwen Su, Yanli Zhang, Hongbin Wang, Lijuan Yang, Wenrong Yang, Pengfei Pang
T4 polynucleotide kinase (T4 PNK) is an important DNA repair-related enzyme that plays a crucial role in DNA recombination, replication and damage repair. Herein, an electrochemical biosensor was developed for detection of T4 PNK activity and inhibitor screening based on supramolecular host-guest recognition between phosphate pillar (Dumitrache and McKinnon, 2017) [5] arene (PP5) and methylene blue (MB). The water-soluble PP5 employed as the host for complexation of MB guest molecules. The substrate DNA with 5'-hydroxyl group was first self-assembled on the gold electrode surface through the chemical adsorption of the thiol group, which was phosphorylated in the presence of T4 PNK and adenosine triphosphate (ATP)...
July 17, 2023: Talanta
https://read.qxmd.com/read/37469559/protein-structural-insights-into-a-rare-pcsk9-gain-of-function-variant-r496w-causing-familial-hypercholesterolemia-in-a-saudi-family-whole-exome-sequencing-and-computational-analysis
#22
JOURNAL ARTICLE
Noor Ahmad Shaik, Najla Al-Shehri, Mohammad Athar, Ahmed Awan, Mariam Khalili, Hadiah Bassam Al Mahadi, Gehan Hejazy, Omar I Saadah, Sameer Eida Al-Harthi, Ramu Elango, Babajan Banaganapalli, Eman Alefishat, Zuhier Awan
Familial hypercholesterolemia (FH) is a globally underdiagnosed genetic condition associated with premature cardiovascular death. The genetic etiology data on Arab FH patients is scarce. Therefore, this study aimed to identify the genetic basis of FH in a Saudi family using whole exome sequencing (WES) and multidimensional bioinformatic analysis. Our WES findings revealed a rare heterozygous gain-of-function variant (R496W) in the exon 9 of the PCSK9 gene as a causal factor for FH in this family. This variant was absent in healthy relatives of the proband and 200 healthy normolipidemic controls from Saudi Arabia...
2023: Frontiers in Physiology
https://read.qxmd.com/read/37395972/expanding-the-phenotype-of-dync1h1-associated-diseases-with-a-rare-variant-resulting-in-spinal-muscular-atrophy-with-lower-extremity-predominance-sma-led-and-upper-motor-neuron-signs
#23
Jessica Lee, Philip Millington, Kavinda Dayasiri, Sithara Ramdas, Sandeep Jayawant, Geetha Anand
BACKGROUND: Spinal muscular atrophy with lower extremity predominance (SMA-LED) is an autosomal dominant disorder. Since SMA-LED affects lower motor neurons, the disease is characterized by weakness and atrophy of lower limb muscles. We present a familial case series of SMA-LED with upper motor neuron signs associated with a rare variant in DYNC1H1. CASE: The index case was referred to Pediatric Neurology at the age of two and half years, due to delayed mobility...
2023: Turkish Journal of Pediatrics
https://read.qxmd.com/read/37368383/-analysis-of-col1a1-and-col1a2-gene-variants-in-two-fetuses-with-osteogenesis-imperfecta
#24
JOURNAL ARTICLE
Yaning Zhang, Xinyue Wu, Qiaoyun Liu, Xiaona Yan, Huize Liu, Dairong Feng
OBJECTIVE: To explore the genetic basis of two fetuses with an osteogenesis imperfecta (OI) phenotype. METHODS: Two fetuses diagnosed at the Affiliated Hospital of Weifang Medical College respectively on June 11, 2021 and October 16, 2021 were selected as the study subjects. Clinical data of the fetuses were collected. Amniotic fluid samples of the fetuses and peripheral blood samples of their pedigree members were collected for the extraction of genomic DNA. Whole exome sequencing (WES) and Sanger sequencing were carried out to identify the candidate variants...
July 10, 2023: Zhonghua Yi Xue Yi Chuan Xue za Zhi, Zhonghua Yixue Yichuanxue Zazhi, Chinese Journal of Medical Genetics
https://read.qxmd.com/read/37343701/phosphatases-maintain-low-catalytic-activity-of-sgk1-dna-damage-resets-the-balance-in-favor-of-phosphorylation
#25
JOURNAL ARTICLE
Wenxue Gu, Hongyan Zheng, Cecilia M Canessa
The Serum- and Glucocorticoid-induced Kinase 1 (SGK1) promotes cell survival under stress conditions and facilitates the emergence of drug resistance in cancer. The underlying mechanisms of these observations are not fully understood. In this study, we found that SGK1 activity is suppressed by the action of the S/T phosphatases PP5 and PP2A, which constantly dephosphorylate SGK1. Using newly developed anti-phosphor SGK1 antibodies and inhibitors of phosphatases, we determined that the high degree of dephosphorylation is caused by two factors: the tendency of SGK1 to unfold, which makes it dependent on Hsp90 chaperone complexes composed of four proteins, Hsp90/CDC37/PP5/SGK1, and where the phosphatase PP5 persistently dephosphorylates SGK1 within the complex...
June 19, 2023: Journal of Biological Chemistry
https://read.qxmd.com/read/37090571/gtp-signaling-links-metabolism-dna-repair-and-responses-to-genotoxic-stress
#26
Weihua Zhou, Zitong Zhao, Angelica Lin, John Yang, Jie Xu, Wilder-Romans Kari, Annabel Yang, Jing Li, Sumeet Solanki, Jennifer Speth, Natalie Walker, Andrew J Scott, Ayesha U Kothari, Yangyang Yao, Erik R Peterson, Navyateja Korimerla, Christian K Werner, Jessica Liang, Janna Jacobson, Sravya Palavalasa, Alexandra M Obrien, Ameer L Elaimy, Sean P Ferris, Shuang G Zhao, Jann N Sarkaria, Balázs Győrffy, Shuqun Zhang, Wajd N Al-Holou, Yoshie Umemura, Meredith A Morgan, Theodore S Lawrence, Costas A Lyssiotis, Marc Peters-Golden, Yatrik M Shah, Daniel R Wahl
How cell metabolism regulates DNA repair is incompletely understood. Here, we define a GTP-mediated signaling cascade that links metabolism to DNA repair and has significant therapeutic implications. GTP, but not other nucleotides, regulates the activity of Rac1, a G protein, that promotes the dephosphorylation of serine 323 on Abl-interactor 1 (Abi-1) by protein phosphatase 5 (PP5). Dephosphorylated Abi-1, a protein previously not known to activate DNA repair, promotes non-homologous end joining. In patients and mouse models of glioblastoma, Rac1 and dephosphorylated Abi-1 mediate DNA repair and resistance to standard of care genotoxic treatments...
April 13, 2023: bioRxiv
https://read.qxmd.com/read/37069154/hsp90-provides-a-platform-for-kinase-dephosphorylation-by-pp5
#27
JOURNAL ARTICLE
Maru Jaime-Garza, Carlos A Nowotny, Daniel Coutandin, Feng Wang, Mariano Tabios, David A Agard
The Hsp90 molecular chaperone collaborates with the phosphorylated Cdc37 cochaperone for the folding and activation of its many client kinases. As with many kinases, the Hsp90 client kinase CRaf is activated by phosphorylation at specific regulatory sites. The cochaperone phosphatase PP5 dephosphorylates CRaf and Cdc37 in an Hsp90-dependent manner. Although dephosphorylating Cdc37 has been proposed as a mechanism for releasing Hsp90-bound kinases, here we show that Hsp90 bound kinases sterically inhibit Cdc37 dephosphorylation indicating kinase release must occur before Cdc37 dephosphorylation...
April 17, 2023: Nature Communications
https://read.qxmd.com/read/36951032/multiple-pathway-dephosphorylated-ask-1-confers-temozolomide-resistance-to-human-glioma-cells
#28
JOURNAL ARTICLE
Kai Gao, Kun She, Jie Fan, Lianbin Shao, Zhiwu Ji
AIM: Temozolomide (TMZ) resistance contributes to the unfavorable prognosis of glioma, however, the mechanism of resistance is unknown. ASK-1 has various functions in many tumors, but its function in glioma is poorly understood. This study aimed to elucidate the function of ASK-1 and the role of its modulators in the induction of TMZ resistance in glioma and the underlying mechanism. MATERIAL AND METHODS: ASK-1 phosphorylation, the IC50 of TMZ, cell viability, and apoptosis were assessed in the U87 and U251 glioma cell lines and the derived TMZ-resistant cell lines U87-TR and U251-TR...
November 3, 2022: Turkish Neurosurgery
https://read.qxmd.com/read/36901937/extraction-structural-and-antioxidant-properties-of-oligosaccharides-hydrolyzed-from-panax-notoginseng-by-ultrasonic-assisted-fenton-degradation
#29
JOURNAL ARTICLE
Xiaoyan Xu, Guanfeng Deng, Xiao Li, Pingjin Li, Tao Chen, Lijun Zhou, Yan Huang, Ming Yuan, Chunbang Ding, Shiling Feng
Plant polysaccharides exhibit many biological activities that are remarkably affected by molecular size and structures. This study aimed to investigate the degradation effect of ultrasonic-assisted Fenton reaction on the Panax notoginseng polysaccharide (PP). PP and its three degradation products (PP3, PP5, and PP7) were obtained from optimized hot water extraction and different Fenton reaction treatments, respectively. The results showed that the molecular weight (Mw) of the degraded fractions significantly decreased after treatment with the Fenton reaction...
February 24, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/36869674/heavy-metal-ions-exchange-driven-protein-phosphorylation-cascade-functions-in-genomic-instability-in-spermatocytes-and-male-infertility
#30
JOURNAL ARTICLE
Ren-Yan Li, Dan Yang, Yan-Ji He, Yong Zhou, Cheng-Cheng Li, Lian-Bing Li, Ming-Xing Liao, Zhong-Liang Deng, Le-Tian Zhao, Tian-Feng Zhang, Yong Luo, Ying-Xiong Wang, Yan-Fei Gao
DNA double-strand breaks (DSBs) are functionally linked to genomic instability in spermatocytes and to male infertility. The heavy metal cadmium (Cd) is known to induce DNA damage in spermatocytes by unknown mechanisms. Here, we showed that Cd ions impaired the canonical non-homologous end-joining (NHEJ) repair pathway, but not the homologous recombination (HR) repair pathway, through stimulation of Ser2056 and Thr2609 phosphorylation of DNA-PKcs at DSB sites. Hyper-phosphorylation of DNA-PKcs led to its premature dissociation from DNA ends and the Ku complex, preventing recruitment of processing enzymes and further ligation of DNA ends...
March 3, 2023: Nucleic Acids Research
https://read.qxmd.com/read/36854411/-a-case-of-dilated-cardiomyopathy-caused-by-fhl2-gene-variant-and-a-literature-review
#31
JOURNAL ARTICLE
Chunrui Yu, Lijuan Jia, Chanjuan Hao, Bianjing Zuo, Wei Li, Fangjie Wang, Jun Guo
OBJECTIVE: To explore the clinical phenotype and genetic features of a child with dilated cardiomyopathy (DCM). METHODS: Clinical data of the child who had presented at the Zhengzhou Children's Hospital on April 28, 2020 was collected. Trio-whole exome sequencing (trio-WES) was carried out for the child and her parents, and candidate variants were validated by Sanger sequencing. "FHL2" was taken as the key word to retrieve related literature from January 1, 1997 to October 31, 2021 in the PubMed database and was also searched in the ClinVar database as a supplement to analyze the correlation between genetic variants and clinical features...
March 10, 2023: Zhonghua Yi Xue Yi Chuan Xue za Zhi, Zhonghua Yixue Yichuanxue Zazhi, Chinese Journal of Medical Genetics
https://read.qxmd.com/read/36768356/plk4-is-a-novel-substrate-of-protein-phosphatase-5
#32
JOURNAL ARTICLE
Edit Ábrahám, Zsuzsánna Réthi-Nagy, Péter Vilmos, Rita Sinka, Zoltán Lipinszki
The conserved Ser/Thr protein phosphatase 5 (PP5) is involved in the regulation of key cellular processes, including DNA damage repair and cell division in eukaryotes. As a co-chaperone of Hsp90, PP5 has been shown to modulate the maturation and activity of numerous oncogenic kinases. Here, we identify a novel substrate of PP5, the Polo-like kinase 4 (Plk4), which is the master regulator of centriole duplication in animal cells. We show that PP5 specifically interacts with Plk4, and is able to dephosphorylate the kinase in vitro and in vivo, which affects the interaction of Plk4 with its partner proteins...
January 19, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/36608408/secreting-recombinant-barnase-by-lactococcus-lactis-and-its-application-in-reducing-rna-from-forages
#33
JOURNAL ARTICLE
Yaqian Ai, Xingjiang Li, Xuefeng Wu, Manuel Montalbán-López, Zhi Zheng, Dongdong Mu
Barnase is a ribonuclease used for plasmid purification, targeted gene therapy and studies of protein interactions. To make the use of barnase easier, the barnase gene from Bacillus amyloliquefaciens BH072 was cloned into Lactococcus lactis under the control of the PP5 or PnisA promoters. Four recombinant expression vectors were constructed with one or two signal peptides to control the enzyme secretion. 310 mg/L barnase was obtained in the presence of its inhibitor barstar after 36 h induction. The properties of barnase were investigated, showing that the optimal reaction temperature and pH were 50 °C and 5...
December 31, 2022: Enzyme and Microbial Technology
https://read.qxmd.com/read/36546850/protein-phosphatase-5-recruiting-chimeras-for-accelerating-apoptosis-signal-regulated-kinase-1-dephosphorylation-with-antiproliferative-activity
#34
JOURNAL ARTICLE
Qiuyue Zhang, Xuexuan Wu, Hengheng Zhang, Qiuyu Wu, Min Fu, Liwen Hua, Xinyue Zhu, Yuqi Guo, Lianshan Zhang, Qidong You, Lei Wang
A normal phosphorylation state is essential for the function of proteins. Biased regulation frequently results in morbidity, especially for the hyperphosphorylation of oncoproteins. The hyperphosphorylation of ASK1 at Thr838 leads to a persistently high activity state, which accelerates the course of gastric cancer. Under normal conditions, PP5 specifically dephosphorylates p-ASK1T838 in cells, thereby weakening ASK1 to a low-basal activity state. However, in tumor types, PP5 shows low activity with a self-inhibition mechanism, making p-ASK1T838 remain at a high level...
December 22, 2022: Journal of the American Chemical Society
https://read.qxmd.com/read/36494772/increased-protein-phosphatase-5-expression-in-inflammation-induced-left-ventricular-dysfunction-in-rats
#35
JOURNAL ARTICLE
Ashmeetha Manilall, Lebogang Mokotedi, Sulè Gunter, Regina Le Roux, Serena Fourie, Colleen A Flanagan, Aletta M E Millen
BACKGROUND: Titin phosphorylation contributes to left ventricular (LV) diastolic dysfunction. The independent effects of inflammation on the molecular pathways that regulate titin phosphorylation are unclear. METHODS: We investigated the effects of collagen-induced inflammation and subsequent tumor necrosis factor-α (TNF-α) inhibition on mRNA expression of genes involved in regulating titin phosphorylation in 70 Sprague-Dawley rats. LV diastolic function was assessed with echocardiography...
December 9, 2022: BMC Cardiovascular Disorders
https://read.qxmd.com/read/36453956/-analysis-of-clinical-phenotypes-and-variants-of-ldlr-gene-in-two-chinese-patients-with-familial-hypercholesterolemia
#36
JOURNAL ARTICLE
Kexin Wang, Tao Sun, Xiaoping Zhang, Yahui Zhang, Hai Gao, Yanlong Ren, Xiaoyan Li
OBJECTIVE: To explore the correlation between clinical phenotypes and pathogenic variants in two patients with familial hypercholesterolemia. METHODS: Both patients were subjected to whole exome sequencing (WES) with a focus on the analysis of genes associated with dyslipidemia. Candidate variants were verified by Sanger sequencing of the patients and their family members. RESULTS: WES revealed that the proband 1 has harbored two heterozygous variants of the LDLR gene, namely c...
December 10, 2022: Zhonghua Yi Xue Yi Chuan Xue za Zhi, Zhonghua Yixue Yichuanxue Zazhi, Chinese Journal of Medical Genetics
https://read.qxmd.com/read/36446791/hsp90-cdc37-pp5-forms-a-structural-platform-for-kinase-dephosphorylation
#37
JOURNAL ARTICLE
Jasmeen Oberoi, Xavi Aran Guiu, Emily A Outwin, Pascale Schellenberger, Theodoros I Roumeliotis, Jyoti S Choudhary, Laurence H Pearl
Activation of client protein kinases by the HSP90 molecular chaperone system is affected by phosphorylation at multiple sites on HSP90, the kinase-specific co-chaperone CDC37, and the kinase client itself. Removal of regulatory phosphorylation from client kinases and their release from the HSP90-CDC37 system depends on the Ser/Thr phosphatase PP5, which associates with HSP90 via its N-terminal TPR domain. Here, we present the cryoEM structure of the oncogenic protein kinase client BRAFV600E bound to HSP90-CDC37, showing how the V600E mutation favours BRAF association with HSP90-CDC37...
November 29, 2022: Nature Communications
https://read.qxmd.com/read/36049535/neuroprotection-of-resveratrol-against-cadmium-poisoning-acts-through-dual-inhibition-of-mtorc1-2-signaling
#38
JOURNAL ARTICLE
Chunxiao Liu, Ruijie Zhang, Liu Yang, Tong Ji, Cuilan Zhu, Beibei Liu, Hai Zhang, Chong Xu, Nana Zhang, Shile Huang, Long Chen
Resveratrol is a natural polyphenol with neuroprotective function. The underlying mechanism is not well understood. Our previous studies have identified that resveratrol antagonizes cadmium (Cd) neurotoxicity via targeting PP2A/PP5-mediated Erk1/2 and JNK pathways. Here we show that resveratrol protected against Cd-poisoning also by blocking Cd-induced activation of mTORC1 and mTORC2 pathways in PC12 cells and murine primary neurons. Co-treatment with inhibitors of mTORC1 (rapamycin), mTORC1/2 (PP242), Erk1/2 (U0126) and/or JNK (SP600125), knockdown of mTOR, or disruption of mTORC1 and/or mTORC2 by silencing raptor, rictor or raptor/rictor, respectively, markedly potentiated the inhibitory effects of resveratrol on Cd-induced phosphorylation of S6K1/4E-BP1 (mTORC1 substrates), Akt (mTORC2 substrate), Erk1/2 and/or JNK/c-Jun, cleavage of caspase-3 and cell death in PC12 cells and/or primary neurons...
November 15, 2022: Neuropharmacology
https://read.qxmd.com/read/36036535/incidental-finding-of-plantar-plate-pathology-on-routine-magnetic-resonance-imaging-of-the-foot-and-ankle
#39
JOURNAL ARTICLE
Amir R Kachooei, Johannes Roedl, Rachel J Shakked, David I Pedowitz
BACKGROUND: We hypothesized that there would be a comparable and high incidence of an incidental torn plantar plate on routine magnetic resonance imaging (MRI) in asymptomatic patients. METHODS: We included adult patients undergoing a foot MRI from 2019 to 2020. Based on the documented reason for MRI, patients were divided into symptomatic and asymptomatic. A separate musculoskeletal radiologist re-evaluated MRI images. Findings were categorized as "torn vs intact...
August 29, 2022: Foot & Ankle Specialist
https://read.qxmd.com/read/35953617/a-study-on-the-antibacterial-activity-and-antimicrobial-resistance-of-pyridinium-cationic-pillar-5-arene-against-staphylococcus-aureus-and-escherichia-coli
#40
JOURNAL ARTICLE
Hua Yang, Dengqi Zhao, Shuping Wang, Lijun Yang, Jianying Huang, Zibin Zhang, Shijun Li
An increasing number of infections caused by multidrug-resistant (MDR) Staphylococcus aureus (S. aureus) and Escherichia coli (E. coli) have severely affected human society. Thus, it is essential to develop an alternative type of antibacterial agents that has a different bacterial resistance mechanism from that of traditional antibiotics. After the synthesis and structural characterization of a cationic pillar[5]arene with pyridinium groups (PP5), the antibacterial and antibiofilm activities as well as its microbial resistance were systematically investigated...
August 12, 2022: International Microbiology: the Official Journal of the Spanish Society for Microbiology
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