keyword
https://read.qxmd.com/read/38350489/probiotic-escherichia-coli-nissle-1917-alleviates-the-neurotoxicity-caused-by-acrylamide-in-zebrafish
#21
JOURNAL ARTICLE
M Vajagathali, E Hannah, K Abirami, M Tharanya, J G Jackson, R Karthik, S G Aaron, M Shanmugaraja
Neurotoxicity is caused by damage to the brain tissue by neurotoxic agents present in the environment and artificial substances produced by human beings. Acrylamide (ACR) is one such chemical substance that causes neurotoxicity, affecting the brain cells. This neurotoxicity causes damage to the sensory and metabolic functions. The current research investigates the favourable effect of probiotic EcN (Escherichia coli Nissle 1917) on ACR-induced neurotoxicity in zebrafish. The protective role of EcN against ACR induced toxicity was assessed based on behaviour, biochemical, and gene expression analysis...
December 22, 2023: Beneficial Microbes
https://read.qxmd.com/read/38348398/minimizing-endogenous-cryptic-plasmids-to-construct-antibiotic-free-expression-systems-for-escherichia-coli-nissle-1917
#22
JOURNAL ARTICLE
Siyan Zhou, Linlin Zhao, Wenjie Zuo, Yilin Zheng, Ping Zhang, Yanan Sun, Yang Wang, Guocheng Du, Zhen Kang
The probiotic bacterium Escherichia coli Nissle 1917 (EcN) holds significant promise for use in clinical and biological industries. However, the reliance on antibiotics to maintain plasmid-borne genes has overshadowed its benefits. In this study, we addressed this issue by engineering the endogenous cryptic plasmids pMUT1 and pMUT2. The non-essential elements were removed to create more stable derivatives pMUT1NR△ and pMUT2HBC△. Synthetic promoters by integrating binding motifs on sigma factors were further constructed and applied for expression of Bacteroides thetaiotaomicron heparinase III and the biosynthesis of ectoine...
March 2024: Synthetic and Systems Biotechnology
https://read.qxmd.com/read/38311724/stable-expression-of-hiv-1-mper-extended-epitope-on-the-surface-of-the-recombinant-probiotic-bacteria-escherichia-coli-nissle-1917-using-crispr-cas9
#23
JOURNAL ARTICLE
Nathaniel Ninyio, Katherina Schmitt, Gladys Sergon, Charlotta Nilsson, Sören Andersson, Nikolai Scherbak
BACKGROUND: Mucosal vaccines have the potential to induce protective immune responses at the sites of infection. Applying CRISPR/Cas9 editing, we aimed to develop a probiotic-based vaccine candidate expressing the HIV-1 envelope membrane-proximal external region (MPER) on the surface of E. coli Nissle 1917. RESULTS: The HIV-1 MPER epitope was successfully introduced in the porin OmpF of the E. coli Nissle 1917 (EcN-MPER) and the modification was stable over 30 passages of the recombinant bacteria on the DNA and protein level...
February 4, 2024: Microbial Cell Factories
https://read.qxmd.com/read/38309259/the-live-biotherapeutic-synb1353-decreases-plasma-methionine-via-directed-degradation-in-animal-models-and-healthy-volunteers
#24
JOURNAL ARTICLE
Mylène Perreault, Jillian Means, Erik Gerson, Michael James, Sean Cotton, Christopher G Bergeron, Mark Simon, Dylan Alexander Carlin, Nathan Schmidt, Theodore C Moore, Julie Blasbalg, Neal Sondheimer, Kenneth Ndugga-Kabuye, William S Denney, Vincent M Isabella, David Lubkowicz, Aoife Brennan, David L Hava
Methionine is an essential proteinogenic amino acid, but its excess can lead to deleterious effects. Inborn errors of methionine metabolism resulting from loss of function in cystathionine β-synthase (CBS) cause classic homocystinuria (HCU), which is managed by a methionine-restricted diet. Synthetic biotics are gastrointestinal tract-targeted live biotherapeutics that can be engineered to replicate the benefits of dietary restriction. In this study, we assess whether SYNB1353, an E. coli Nissle 1917 derivative, impacts circulating methionine and homocysteine levels in animals and healthy volunteers...
January 25, 2024: Cell Host & Microbe
https://read.qxmd.com/read/38253022/biochemotaxis-oriented-engineering-bacteria-expressing-glp-1-enhance-diabetes-therapy-by-regulating-the-balance-of-immune
#25
JOURNAL ARTICLE
Yifei Wang, Yupeng Shi, Xueyuan Peng, Tongtong Li, Chenglin Liang, Wenhao Wang, Mengyang Zhou, Jiali Yang, Jingliang Cheng, Zhenzhong Zhang, Lin Hou
Glucagon like peptide-1 (GLP-1) is an effective hypoglycemic drug that can repair the pancreas β Cells and promote insulin secretion. However, GLP-1 has poor stability and lack of target ability, which makes it difficult to reach the site of action to exert its efficacy. Here, we introduce GLP-1-expressing plasmids into the Escherichia coli Nissle 1917 (EcN) and form a lipid membrane through simple self-assembly on its surface, resulting in an oral delivery system (LEG) capable of resisting the harsh environment of the gastrointestinal tract...
January 22, 2024: Advanced Healthcare Materials
https://read.qxmd.com/read/38248847/genetic-circuits-for-feedback-control-of-gamma-aminobutyric-acid-biosynthesis-in-probiotic-escherichia-coli-nissle-1917
#26
JOURNAL ARTICLE
Matthew Lebovich, Marcos A Lora, Jared Gracia-David, Lauren B Andrews
Engineered microorganisms such as the probiotic strain Escherichia coli Nissle 1917 (EcN) offer a strategy to sense and modulate the concentration of metabolites or therapeutics in the gastrointestinal tract. Here, we present an approach to regulate the production of the depression-associated metabolite gamma-aminobutyric acid (GABA) in EcN using genetic circuits that implement negative feedback. We engineered EcN to produce GABA by overexpressing glutamate decarboxylase and applied an intracellular GABA biosensor to identify growth conditions that improve GABA biosynthesis...
January 11, 2024: Metabolites
https://read.qxmd.com/read/38245564/enhancing-tumor-specific-recognition-of-programmable-synthetic-bacterial-consortium-for-precision-therapy-of-colorectal-cancer
#27
JOURNAL ARTICLE
Tuoyu Zhou, Jingyuan Wu, Haibo Tang, Dali Liu, Byong-Hun Jeon, Weilin Jin, Yiqing Wang, Yuanzhang Zheng, Aman Khan, Huawen Han, Xiangkai Li
Probiotics hold promise as a potential therapy for colorectal cancer (CRC), but encounter obstacles related to tumor specificity, drug penetration, and dosage adjustability. In this study, genetic circuits based on the E. coli Nissle 1917 (EcN) chassis were developed to sense indicators of tumor microenvironment and control the expression of therapeutic payloads. Integration of XOR gate amplify gene switch into EcN biosensors resulted in a 1.8-2.3-fold increase in signal output, as confirmed by mathematical model fitting...
January 20, 2024: NPJ Biofilms and Microbiomes
https://read.qxmd.com/read/38245513/engineering-tumor-colonizing-e-coli-nissle-1917-for-detection-and-treatment-of-colorectal-neoplasia
#28
MULTICENTER STUDY
Candice R Gurbatri, Georgette A Radford, Laura Vrbanac, Jongwon Im, Elaine M Thomas, Courtney Coker, Samuel R Taylor, YoungUk Jang, Ayelet Sivan, Kyu Rhee, Anas A Saleh, Tiffany Chien, Fereshteh Zandkarimi, Ioana Lia, Tamsin R M Lannagan, Tongtong Wang, Josephine A Wright, Hiroki Kobayashi, Jia Q Ng, Matt Lawrence, Tarik Sammour, Michelle Thomas, Mark Lewis, Lito Papanicolas, Joanne Perry, Tracy Fitzsimmons, Patricia Kaazan, Amanda Lim, Alexandra M Stavropoulos, Dion A Gouskos, Julie Marker, Cheri Ostroff, Geraint Rogers, Nicholas Arpaia, Daniel L Worthley, Susan L Woods, Tal Danino
Bioengineered probiotics enable new opportunities to improve colorectal cancer (CRC) screening, prevention and treatment. Here, first, we demonstrate selective colonization of colorectal adenomas after oral delivery of probiotic E. coli Nissle 1917 (EcN) to a genetically-engineered murine model of CRC predisposition and orthotopic models of CRC. We next undertake an interventional, double-blind, dual-centre, prospective clinical trial, in which CRC patients take either placebo or EcN for two weeks prior to resection of neoplastic and adjacent normal colorectal tissue (ACTRN12619000210178)...
January 20, 2024: Nature Communications
https://read.qxmd.com/read/38227962/microfluidics-derived-microparticles-with-prebiotics-and-probiotics-for-enhanced-in-situ-colonization-and-immunoregulation-of-colitis
#29
JOURNAL ARTICLE
Yi Yin, Zhun Li, Hengfei Gao, Dongtao Zhou, Zhenxing Zhu, Liang Tao, Wenxian Guan, Yanfeng Gao, Yujun Song, Meng Wang
Oral administration of probiotics orchestrates the balance between intestinal microbes and the immune response. However, effective delivery and in situ colonization are limited by the harsh environment of the gastrointestinal tract. Herein, we provide a microfluidics-derived encapsulation strategy to address this problem. A novel synergistic delivery system composed of EcN Nissle 1917 and prebiotics, including alginate sodium and inulin gel, for treating inflammatory bowel disease and colitis-associated colorectal cancer is proposed...
January 16, 2024: Nano Letters
https://read.qxmd.com/read/38215690/enteral-nutrition-promotes-the-remission-of-colitis-by-gut-bacteria-mediated-histidine-biosynthesis
#30
JOURNAL ARTICLE
Wanyi Zeng, Jinjie Wu, Hongyu Xie, Haoyang Xu, Dayi Liang, Qilang He, Xiaoya Yang, Chen Liu, Junli Gong, Qiang Zhang, Zhanhao Luo, Yuan Chen, Zhen He, Ping Lan
BACKGROUND: Exclusive enteral nutrition (EEN) is an important alternative strategy for patients with Crohn's disease (CD), and during this process, microbiota alterations have been observed. However, the underlying mechanisms by which EEN reduces intestinal inflammation are currently unclear. METHODS: The therapeutic potential of enteral nutrition (EN) was assessed using various mouse models. Fecal full-length 16S rDNA sequencing analysis and several CD metagenome datasets were used to identify the candidate therapeutic bacteria Faecalibaculum rodentium (F...
January 11, 2024: EBioMedicine
https://read.qxmd.com/read/38189668/expectations-for-employing-escherichia-coli-nissle-1917-in-food-science-and-nutrition
#31
REVIEW
Miaomiao Hu, Tao Zhang, Ming Miao, Kewen Li, Qingmin Luan, Guilian Sun
As a promising probiotic strain, Escherichia coli Nissle 1917 (EcN) has been demonstrated to confer beneficial effects on intestinal health, immune function, and pathogen prevention. Additionally, EcN has also been widely studied due to its clear genomic information, tractable gene regulation, and simple growth conditions. This review summarizes the various applications potential of EcN in food science and nutrition, including inflammation prevention, tumor-targeting therapy, antibacterial agents for food, and nutrient production with a focus on specific case studies...
January 8, 2024: Critical Reviews in Food Science and Nutrition
https://read.qxmd.com/read/38180814/intein-based-thermoregulated-meganucleases-for-containment-of-genetic-material
#32
JOURNAL ARTICLE
Gary W Foo, Christopher D Leichthammer, Ibrahim M Saita, Nicholas D Lukas, Izabela Z Batko, David E Heinrichs, David R Edgell
Limiting the spread of synthetic genetic information outside of the intended use is essential for applications where biocontainment is critical. In particular, biocontainment of engineered probiotics and plasmids that are excreted from the mammalian gastrointestinal tract is needed to prevent escape and acquisition of genetic material that could confer a selective advantage to microbial communities. Here, we built a simple and lightweight biocontainment system that post-translationally activates a site-specific DNA endonuclease to degrade DNA at 18°C and not at higher temperatures...
January 5, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38164903/surface-mineralization-of-engineered-bacterial-outer-membrane-vesicles-to-enhance-tumor-photothermal-immunotherapy
#33
JOURNAL ARTICLE
Xue Chen, Puze Li, Ban Luo, Cheng Song, Meichan Wu, Yuzhu Yao, Dongdong Wang, Xuyu Li, Bo Hu, Suting He, Yuan Zhao, Chongyi Wang, Xiangliang Yang, Jun Hu
Gram-negative bacteria can naturally produce nanosized spherical outer membrane vesicles (OMVs) with a lipid bilayer membrane, possessing immunostimulatory capabilities to be potentially applied in tumor therapy. However, the systemic toxicity induced by pathogen-associated molecular patterns (PAMPs) of OMVs is the main obstacle for their clinical translation. Herein, melanin-loaded OMVs were produced with a genetic engineering strategy and further coated with calcium phosphate (CaP) to reduce their toxicity to enhance tumor treatment effects...
January 2, 2024: ACS Nano
https://read.qxmd.com/read/38147604/reduction-of-fecal-calprotectin-levels-induced-by-a-short-course-of-escherichia-coli-nissle-is-associated-with-a-lower-likelihood-of-disease-flares-in-patients-with-ulcerative-colitis-in-clinical-remission
#34
JOURNAL ARTICLE
Giorgia Bodini, Andrea Ghezzi, Andrea Pasta, Elisa Marabotto, Francesco Calabrese, Chiara Facchini, Maria Giulia Demarzo, Edoardo Giovanni Giannini
BACKGROUND AND AIMS: Fecal calprotectin (FC) is a biomarker of gut inflammation, and Escherichia coli Nissle 1917 (EcN) is a probiotic strain able to reduce gut inflammation and maintain disease remission in patients with inflammatory bowel disease (IBD). The aim is to assess the effects of EcN administration in patients with IBD in clinical remission and altered FC values. METHODS: We prospectively included 82 patients with ulcerative colitis (UC) (n=49) and Crohn's disease (CD) (n=33) in clinical remission and with FC values above 250 mcg/g (T0) who were treated with EcN alone for 2 months...
December 22, 2023: Journal of Gastrointestinal and Liver Diseases: JGLD
https://read.qxmd.com/read/38090710/engineered-living-materials-for-the-conversion-of-a-low-cost-food-grade-precursor-to-a-high-value-flavonoid
#35
JOURNAL ARTICLE
Florian Riedel, Maria Puertas Bartolomé, Lara Luana Teruel Enrico, Claudia Fink-Straube, Cao Nguyen Duong, Fabio Gherlone, Ying Huang, Vito Valiante, Aránzazu Del Campo, Shrikrishnan Sankaran
Microbial biofactories allow the upscaled production of high-value compounds in biotechnological processes. This is particularly advantageous for compounds like flavonoids that promote better health through their antioxidant, anti-bacterial, anti-cancer and other beneficial effects but are produced in small quantities in their natural plant-based hosts. Bacteria like E. coli have been genetically modified with enzyme cascades to produce flavonoids like naringenin and pinocembrin from coumaric or cinnamic acid...
2023: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/38086386/engineering-e-%C3%A2-coli-strains-using-antibiotic-resistance-gene-free-plasmids
#36
JOURNAL ARTICLE
Matthew B Amrofell, Sunaina Rengarajan, Steven T Vo, Erick S Ramirez Tovar, Larissa LoBello, Gautam Dantas, Tae Seok Moon
We created a generalizable pipeline for antibiotic-resistance-gene-free plasmid (ARGFP)-based cloning using a dual auxotrophic- and essential-gene-based selection strategy. We use auxotrophic selection to construct plasmids in engineered E. coli DH10B cloning strains and both auxotrophic- and essential-gene-based selection to (1) select for recombinant strains and (2) maintain a plasmid in E. coli Nissle 1917, a common chassis for engineered probiotic applications, and E. coli MG1655, the laboratory "wild-type" E...
December 3, 2023: Cell Rep Methods
https://read.qxmd.com/read/38070121/engineering-probiotic-e-coli-nissle-1917-for-release-of-therapeutic-nanobodies
#37
JOURNAL ARTICLE
Candice Gurbatri, Tal Danino
Bioengineered probiotics enable new opportunities to improve cancer treatment strategies due to their tumor-colonizing capabilities. Here, we will describe the development of a probiotic E. coli Nissle 1917 platform encoding a synchronized lysis mechanism for the localized and sustained release of blocking nanobodies against immune checkpoint molecules like programmed cell death protein-ligand 1 and cytotoxic T lymphocyte-associated protein-4. Specifically, we will detail the experimental protocols needed to (1) encode and validate binding of recombinantly produced checkpoint blockade nanobodies, (2) evaluate the therapeutic efficacy and safety of the probiotic platform in syngeneic tumor-bearing mice, and (3) analyze the immunophenotype of the tumor microenvironment...
2024: Methods in Molecular Biology
https://read.qxmd.com/read/38054771/metal-phenolic-network-directed-coating-of-single-probiotic-cell-followed-by-photoinitiated-thiol-ene-click-fortification-to-enhance-oral-therapy
#38
JOURNAL ARTICLE
Taisong Fang, Songbai Liu
Probiotics-based oral therapy has become a promising way to prevent and treat various diseases, while the application of probiotics is primarily restricted by loss of viability due to adverse conditions in the gastrointestinal (GI) tract during oral delivery. Layer-by-layer (LbL) single-cell encapsulation approaches are widely employed to improve the bioavailability of probiotics. However, they are generally time- and labor-intensive owing to multistep operation. Herein, a simple yet efficient LbL technique is developed to coat a model probiotic named Escherichia coli Nissle 1917 (EcN) through polyphenol-Ca2+ network directed allyl-modified gelatin (GelAGE) adsorption followed by cross-linking of GelAGE via photoinitiated thiol-ene click reaction to protect EcN from harsh microenvironments of GI tract...
December 6, 2023: Small
https://read.qxmd.com/read/38009498/engineered-probiotic-based-personalized-cancer-vaccine-potentiates-antitumor-immunity-through-initiating-trained-immunity
#39
JOURNAL ARTICLE
Zhaoxia Chen, Tuying Yong, Zhaohan Wei, Xiaoqiong Zhang, Xin Li, Jiaqi Qin, Jianye Li, Jun Hu, Xiangliang Yang, Lu Gan
Cancer vaccines hold great potential for clinical cancer treatment by eliciting T cell-mediated immunity. However, the limited numbers of antigen-presenting cells (APCs) at the injection sites, the insufficient tumor antigen phagocytosis by APCs, and the presence of a strong tumor immunosuppressive microenvironment severely compromise the efficacy of cancer vaccines. Trained innate immunity may promote tumor antigen-specific adaptive immunity. Here, a personalized cancer vaccine is developed by engineering the inactivated probiotic Escherichia coli Nissle 1917 to load tumor antigens and β-glucan, a trained immunity inducer...
November 27, 2023: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/38009319/genetically-engineered-probiotics-for-an-optical-imaging-guided-tumor-photothermal-therapy-immunotherapy
#40
JOURNAL ARTICLE
Xue Chen, Puze Li, Shiqiang Xie, Xiangliang Yang, Ban Luo, Jun Hu
Bacteria-based cancer therapy (BCT) has been extensively investigated because of the tumor targeting and antitumor immunity activating abilities of bacteria over traditional nanodrugs, but their potential systemic toxicity poses a challenge. Therefore, it is important to visualize the precise localization and real-time distribution of bacteria in vivo to guide the treatment. Herein, biogenetically engineered Escherichia coli Nissle 1917 (EcN) were constructed to highly express tyrosinase to intracellularly generate cyanine 5-labeled melanin-like polymers (Cy5-Mel), thus endowing them with a bright fluorescence and an excellent photothermal performance upon NIR laser irradiation, thereby inducing the intense immunogenic death of tumor cells and release of tumor-associated antigens...
November 27, 2023: Biomaterials Science
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