keyword
https://read.qxmd.com/read/36808915/mesh-modeling-of-system-geometry-and-anatomy-phantoms-for-realistic-gate-simulations-and-their-inclusion-in-spect-reconstruction
#21
JOURNAL ARTICLE
Benjamin Auer, Arda Konik, Timothy J Fromme, Jan De Beenhouwer, Kesava S Kalluri, Clifford Lindsay, Lars R Furenlid, Phillip H Kuo, Michael A King
OBJECTIVE: Monte-Carlo simulation studies have been essential for advancing various developments in SPECT imaging, such as system design and accurate image reconstruction. Among the simulation software available, GATE is one of the most used simulation toolkits in nuclear medicine, which allows building systems and attenuation phantom geometries based on the combination of idealized volumes. However, these idealized volumes are inadequate for modeling free-form shape components of such geometries...
February 21, 2023: Physics in Medicine and Biology
https://read.qxmd.com/read/36789259/exploring-the-role-of-plant-lysin-motif-receptor-like-kinases-in-regulating-plant-microbe-interactions-in-the-bioenergy-crop-populus
#22
JOURNAL ARTICLE
Kevin R Cope, Erica T Prates, John I Miller, Omar N A Demerdash, Manesh Shah, David Kainer, Ashley Cliff, Kyle A Sullivan, Mikaela Cashman, Matthew Lane, Anna Matthiadis, Jesse Labbé, Timothy J Tschaplinski, Daniel A Jacobson, Udaya C Kalluri
For plants, distinguishing between mutualistic and pathogenic microbes is a matter of survival. All microbes contain microbe-associated molecular patterns (MAMPs) that are perceived by plant pattern recognition receptors (PRRs). Lysin motif receptor-like kinases (LysM-RLKs) are PRRs attuned for binding and triggering a response to specific MAMPs, including chitin oligomers (COs) in fungi, lipo-chitooligosaccharides (LCOs), which are produced by mycorrhizal fungi and nitrogen-fixing rhizobial bacteria, and peptidoglycan in bacteria...
2023: Computational and Structural Biotechnology Journal
https://read.qxmd.com/read/36738461/a-racial-analysis-of-pain-outcomes-following-microvascular-decompression-for-trigeminal-neuralgia
#23
JOURNAL ARTICLE
Raymond J So, Anita L Kalluri, Kaitlyn Storm, Sumil K Nair, Bhargavi R Budihal, Judy Huang, Michael Lim, Chetan Bettegowda, Risheng Xu
OBJECTIVE: Pain outcomes by race in trigeminal neuralgia (TN) are not well investigated. The authors aimed to compare microvascular decompression (MVD) outcomes in TN patients on the basis of self-identified race. METHODS: The authors retrospectively reviewed all patients with TN who underwent MVD at their institution from 2007 to 2020. Each patient's self-reported race was recorded, and Barrow Neurological Institute (BNI) scores for pain and numbness were compared...
September 1, 2023: Journal of Neurosurgery
https://read.qxmd.com/read/36093738/phase-1-evaluation-of-elezanumab-anti-rgma-mab-in-healthy-and-ms-participants
#24
JOURNAL ARTICLE
Hari V Kalluri, Matthew R Rosebraugh, Thomas P Misko, Adam Ziemann, Wei Liu, Bruce A C Cree
OBJECTIVE: To describe the safety, tolerability, pharmacokinetics, and immunogenicity of elezanumab (ABT-555), a fully human monoclonal antibody (mAb) directed against Repulsive Guidance Molecule A (RGMa), in healthy and multiple sclerosis (MS) study participants. METHODS: The single-center, first-in-human, single ascending dose (SAD) study evaluated elezanumab (50mg-1600mg IV and 150mg SC) in 47 healthy men and women. The multi-center multiple ascending dose (MAD; NCT02601885) study evaluated elezanumab (150mg, 600mg, and 1800mg) in 20 adult men and women with MS, receiving either maintenance or no immunomodulatory treatment...
September 12, 2022: Annals of Neurology
https://read.qxmd.com/read/36075501/a-prospective-cohort-study-evaluating-pan-promise-a-patient-reported-outcome-measure-to-detect-post-ercp-morbidity
#25
JOURNAL ARTICLE
Nikhil R Thiruvengadam, Abdul Kouanda, Anita Kalluri, Douglas Schaubel, Monica Saumoy, Kimberly Forde, Jun Song, Alec Faggen, Brenton G Davis, Kenechukwu Chudy Onwugaje, Gregory Cote, Mustafa A Arain, Michael L Kochman
BACKGROUND & AIMS: The Cotton Consensus (CC) criteria for post-endoscopic retrograde cholangiopancreatography (ERCP) pancreatitis (PEP) may not capture post-ERCP morbidity. PAN-PROMISE, a patient-reported outcome measure (PROM), was developed to quantify acute pancreatitis-related morbidity. This study aims to determine the value of PAN-PROMISE in independently defining ERCP-related morbidity. METHODS: We conducted a prospective cohort study of patients undergoing ERCP at 2 academic centers from September 2021 to August 2022...
September 6, 2022: Clinical Gastroenterology and Hepatology
https://read.qxmd.com/read/35934926/a-single-arm-open-label-multi-center-and-comparative-study-of-the-anne-sleep-system-versus-polysomnography-to-diagnose-obstructive-sleep-apnea
#26
JOURNAL ARTICLE
Charles Davies, Jong Yoon Lee, Jessica Walter, Donghyun Kim, Lian Yu, Junbin Park, Stefanida Blake, Lakshmi Kalluri, Mark Cziraky, Eric Stanek, Julie Miller, Brian J Harty, Jacob Schauer, Stephanie M Rangel, Alexa Serao, Claire Edel, Davina S Ran, Matthew O Olagbenro, Andrew Lim, Kuljeet Gill, Jessica Cooksey, Omid Toloui, Thomas Power, Shuai Xu, Phyllis Zee
STUDY OBJECTIVES: Evaluate per patient diagnostic performance of a flexible wireless dual sensor system (ANNE sleep) compared to reference standard polysomnography (PSG) for the diagnosis of moderate and severe obstructive sleep apnea (OSA) with a minimum prespecified threshold of 80% for both sensitivity and specificity. METHODS: A multicenter clinical trial was conducted to evaluate ANNE sleep versus PSG to diagnose moderate and severe OSA in individuals 22 years or older...
August 8, 2022: Journal of Clinical Sleep Medicine: JCSM: Official Publication of the American Academy of Sleep Medicine
https://read.qxmd.com/read/35868307/oncogenic-collagen-i-homotrimers-from-cancer-cells-bind-to-%C3%AE-3%C3%AE-1-integrin-and-impact-tumor-microbiome-and-immunity-to-promote-pancreatic-cancer
#27
JOURNAL ARTICLE
Yang Chen, Sujuan Yang, Jena Tavormina, Desiree Tampe, Michael Zeisberg, Huamin Wang, Krishnan K Mahadevan, Chang-Jiun Wu, Hikaru Sugimoto, Chia-Chi Chang, Robert R Jenq, Kathleen M McAndrews, Raghu Kalluri
In contrast to normal type I collagen (Col1) heterotrimer (α1/α2/α1) produced by fibroblasts, pancreatic cancer cells specifically produce unique Col1 homotrimer (α1/α1/α1). Col1 homotrimer results from epigenetic suppression of the Col1a2 gene and promotes oncogenic signaling, cancer cell proliferation, tumor organoid formation, and growth via α3β1 integrin on cancer cells, associated with tumor microbiome enriched in anaerobic Bacteroidales in hypoxic and immunosuppressive tumors...
August 8, 2022: Cancer Cell
https://read.qxmd.com/read/35698056/distribution-of-macular-pigments-in-macular-telangiectasia-type-2-and-correlation-with-optical-coherence-tomography-characteristics-and-visual-acuity
#28
JOURNAL ARTICLE
Ramyaa Srinivasan, Michel M Teussink, Kenneth R Sloan, Rekha Priya Kalluri Bharat, Raja Narayanan, Rajiv Raman
BACKGROUND: To estimate macular pigment values in macular telangiectasia (MacTel) Type 2 in comparison with healthy subjects in the South Indian population across different spatial profiles and to quantify the regional differences of macular pigment optical density (MPOD) in MacTel Type 2. METHODS: In this prospective cross-sectional study, healthy controls and patients diagnosed with various stages of MacTel Type 2 underwent MPOD measurement using dual-wavelength autofluorescence technique with Spectralis HRA + OCT...
June 13, 2022: BMC Ophthalmology
https://read.qxmd.com/read/35668815/application-of-a-machine-learning-algorithm-in-generating-an-evapotranspiration-data-product-from-coupled-thermal-infrared-and-microwave-satellite-observations
#29
JOURNAL ARTICLE
Li Fang, Xiwu Zhan, Satya Kalluri, Peng Yu, Chris Hain, Martha Anderson, Istvan Laszlo
Land surface evapotranspiration (ET) is one of the main energy sources for atmospheric dynamics and a critical component of the local, regional, and global water cycles. Consequently, accurate measurement or estimation of ET is one of the most active topics in hydro-climatology research. With massive and spatially distributed observational data sets of land surface properties and environmental conditions being collected from the ground, airborne or space-borne platforms daily over the past few decades, many research teams have started to use big data science to advance the ET estimation methods...
2022: Frontiers in big data
https://read.qxmd.com/read/35634303/evaluation-of-an-immunopet-tracer-for-il-12-in-a-preclinical-model-of-inflammatory-immune-responses
#30
JOURNAL ARTICLE
Nerissa T Viola, James E Glassbrook, Jhansi R Kalluri, Justin B Hackett, Madison N Wicker, Joshua Sternberg, Heather M Gibson
The immune cytokine interleukin-12 (IL-12) is involved in cancer initiation and progression, autoimmunity, as well as graft versus host disease. The ability to monitor IL-12 via imaging may provide insight into various immune processes, including levels of antitumor immunity, inflammation, and infection due to its functions in immune signaling. Here, we report the development and preclinical evaluation of an antibody-based IL-12-specific positron emission tomography (PET) tracer. To mimic localized infection and stimulate IL-12 production, BALB/c mice were administered lipopolysaccharide (LPS) intramuscularly...
2022: Frontiers in Immunology
https://read.qxmd.com/read/35118173/patch-clamp-recordings-and-single-fiber-labeling-from-spiral-ganglion-somata-in-acutely-prepared-semi-intact-cochleae-from-neonatal-rats
#31
JOURNAL ARTICLE
Alexander L Markowitz, Megana R Iyer, Radha Kalluri
Spiral ganglion neurons (SGN) are the primary neuronal pathway for transmitting sensory information from the inner ear to the brainstem. Recent studies have revealed significant biophysical and molecular diversity indicating that auditory neurons are comprised of sub-groups whose intrinsic properties contribute to their diverse functions. Previous approaches for studying the intrinsic biophysical properties of spiral ganglion neurons relied on patch-clamp and molecular analysis of cultured somata that were disconnected from their pre-synaptic hair cell partners...
January 5, 2022: Bio-protocol
https://read.qxmd.com/read/35058437/circulating-ace2-expressing-extracellular-vesicles-block-broad-strains-of-sars-cov-2
#32
JOURNAL ARTICLE
Lamiaa El-Shennawy, Andrew D Hoffmann, Nurmaa Khund Dashzeveg, Kathleen M McAndrews, Paul J Mehl, Daphne Cornish, Zihao Yu, Valerie L Tokars, Vlad Nicolaescu, Anastasia Tomatsidou, Chengsheng Mao, Christopher J Felicelli, Chia-Feng Tsai, Carolina Ostiguin, Yuzhi Jia, Lin Li, Kevin Furlong, Jan Wysocki, Xin Luo, Carolina F Ruivo, Daniel Batlle, Thomas J Hope, Yang Shen, Young Kwang Chae, Hui Zhang, Valerie S LeBleu, Tujin Shi, Suchitra Swaminathan, Yuan Luo, Dominique Missiakas, Glenn C Randall, Alexis R Demonbreun, Michael G Ison, Raghu Kalluri, Deyu Fang, Huiping Liu
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused the pandemic of the coronavirus induced disease 2019 (COVID-19) with evolving variants of concern. It remains urgent to identify novel approaches against broad strains of SARS-CoV-2, which infect host cells via the entry receptor angiotensin-converting enzyme 2 (ACE2). Herein, we report an increase in circulating extracellular vesicles (EVs) that express ACE2 (evACE2) in plasma of COVID-19 patients, which levels are associated with severe pathogenesis...
January 20, 2022: Nature Communications
https://read.qxmd.com/read/34746540/improved-performance-of-a-multipinhole-spect-for-dat-imaging-by-increasing-number-of-pinholes-at-the-expense-of-increased-multiplexing
#33
JOURNAL ARTICLE
Arda Könik, Navid Zeraatkar, Kesava S Kalluri, Benjamin Auer, Timothy J Fromme, Yulun He, Micaehla May, Lars R Furenlid, Phillip H Kuo, Michael A King
SPECT imaging of dopamine transporters (DAT) in the brain is a widely utilized study to improve the diagnosis of Parkinsonian syndromes, where conventional (parallel-hole and fan-beam) collimators on dual-head scanners are commonly employed. We have designed a multi-pinhole (MPH) collimator to improve the performance of DAT imaging. The MPH collimator focuses on the striatum and hence offers a better trade-off for sensitivity and spatial resolution than the conventional collimators within this clinically most relevant region for DAT imaging...
November 2021: IEEE Transactions on Radiation and Plasma Medical Sciences
https://read.qxmd.com/read/34665491/physiologic-lead-placement-with-electroanatomic-mapping-a-case-series
#34
JOURNAL ARTICLE
Jayson R Baman, Varun Garg, Aravind G Kalluri, Jeremiah Wasserlauf, Amar Trivedi, Bradley P Knight, Parikshit S Sharma, Nishant Verma
INTRODUCTION: His bundle pacing (HBP) and left bundle branch area pacing (LBBAP) have emerged as attractive alternatives to traditional biventricular pacing to achieve cardiac resynchronization therapy. Early reported results have been inconsistent, particularly amongst patients in whom initial placement with traditional approaches has been unsuccessful or those with complex anatomy or congenital abnormalities. In this report, we describe the use of three-dimensional electroanatomic mapping (EAM) in five selected cases...
December 2021: Journal of Cardiovascular Electrophysiology
https://read.qxmd.com/read/34507309/cerebral-spect-imaging-with-different-acquisition-schemes-using-varying-levels-of-multiplexing-versus-sensitivity-in-an-adaptive-multi-pinhole-brain-dedicated-scanner
#35
JOURNAL ARTICLE
Navid Zeraatkar, Kesava Kalluri, Benjamin Auer, Micaehla May, R Garrett Richards, Lars R Furenlid, Phillip H Kuo, Michael A King
Application of multi-pinhole collimator in pinhole-based SPECT increases detection sensitivity. The presence of multiplexing in projection images due to the usage of multiple pinholes can further improve the sensitivity at the cost of adding data ambiguity. We are developing a next-generation adaptive brain-dedicated SPECT system -AdaptiSPECT-C. The AdaptiSPECT-C can adapt the multiplexing level and system sensitivity using adaptable pinhole modules. In this study, we investigated the performance of 4 data acquisition schemes with different multiplexing levels and sensitivities on cerebral SPECT imaging...
September 10, 2021: Biomedical Physics & Engineering Express
https://read.qxmd.com/read/34129825/promotion-of-cholangiocarcinoma-growth-by-diverse-cancer-associated-fibroblast-subpopulations
#36
Silvia Affo, Ajay Nair, Francesco Brundu, Aashreya Ravichandra, Sonakshi Bhattacharjee, Michitaka Matsuda, LiKang Chin, Aveline Filliol, Wen Wen, Xinhua Song, Aubrianna Decker, Jeremy Worley, Jorge Matias Caviglia, Lexing Yu, Deqi Yin, Yoshinobu Saito, Thomas Savage, Rebecca G Wells, Matthias Mack, Lars Zender, Nicholas Arpaia, Helen E Remotti, Raul Rabadan, Peter Sims, Anne-Laure Leblond, Achim Weber, Marc-Oliver Riener, Brent R Stockwell, Jellert Gaublomme, Josep M Llovet, Raghu Kalluri, George K Michalopoulos, Ekihiro Seki, Daniela Sia, Xin Chen, Andrea Califano, Robert F Schwabe
No abstract text is available yet for this article.
June 14, 2021: Cancer Cell
https://read.qxmd.com/read/33590465/fabrication-of-microneedle-patches-with-lyophilized-influenza-vaccine-suspended-in-organic-solvent
#37
JOURNAL ARTICLE
Yoo Chun Kim, Jeong Woo Lee, E Stein Esser, Haripriya Kalluri, Jessica C Joyce, Richard W Compans, Ioanna Skountzou, Mark R Prausnitz
Skin vaccination by microneedle (MN) patch simplifies the immunization process to increase access to vaccines for global health. Lyophilization has been widely used to stabilize vaccines and other biologics during storage, but is generally not compatible with the MN patch manufacturing processes. In this study, our goal was to develop a method to incorporate lyophilized inactivated H1N1 influenza vaccine into MN patches during manufacturing by suspending freeze-dried vaccine in anhydrous organic solvent during the casting process...
February 15, 2021: Drug Delivery and Translational Research
https://read.qxmd.com/read/33352545/improvement-in-sampling-and-modulation-of-multiplexing-with-temporal-shuttering-of-adaptable-apertures-in-a-brain-dedicated-multi-pinhole-spect-system
#38
JOURNAL ARTICLE
Navid Zeraatkar, Benjamin Auer, Kesava Kalluri, Micaehla May, Neil C Momsen, R Garrett Richards, Lars R Furenlid, Phillip H Kuo, Michael A King
We are developing a multi-detector pinhole-based stationary brain-dedicated SPECT system: AdaptiSPECT-C. In this work, we introduced a new design prototype with multiple adaptable pinhole apertures for each detector to modulate the multiplexing by employing temporal shuttering of apertures. Temporal shuttering of apertures over the scan time provides the AdaptiSPECT-C with the capability of multiple-frame acquisition. We investigated, through analytic simulation, the impact of projection multiplexing on image quality using several digital phantoms and a customized anthropomorphic phantom emulating brain perfusion clinical distribution...
December 22, 2020: Physics in Medicine and Biology
https://read.qxmd.com/read/33065564/inclusion-of-quasi-vertex-views-in-a-brain-dedicated-multi-pinhole-spect-system-for-improved-imaging-performance
#39
JOURNAL ARTICLE
Benjamin Auer, Navid Zeraatkar, Justin C Goding, Arda Konik, Timothy J Fromme, Kesava Kalluri, Lars R Furenlid, Phillip H Kuo, Michael A King
With brain-dedicated multi-detector systems employing pinhole apertures the usage of detectors facing the top of the patient's head (i.e., quasi-vertex views) can provide the advantage of additional viewing from close to the brain for improved detector coverage. In this paper, we report the results of simulation and reconstruction studies to investigate the impact of the quasi-vertex views on the imaging performance of AdaptiSPECT-C, a brain-dedicated stationary SPECT system under development. In this design, both primary and scatter photons from regions located inferior to the brain can contribute to SPECT projections acquired by the quasi-vertex views, and thus degrade AdaptiSPECT-C imaging performance...
October 16, 2020: Physics in Medicine and Biology
https://read.qxmd.com/read/33048456/coproporphyrin-i-can-serve-as-an-endogenous-biomarker-for-oatp1b1-inhibition-assessment-using-a-glecaprevir-pibrentasvir-clinical-study
#40
JOURNAL ARTICLE
Hari Varun Kalluri, Ryota Kikuchi, Sheryl Coppola, Jeffrey Schmidt, Mohamed-Eslam F Mohamed, Daniel A J Bow, Ahmed Hamed Salem
Organic anion transporting polypeptide (OATP) 1B1 and OATP1B3 are involved in the disposition of a variety of commonly prescribed drugs. The evaluation of OATP1B1/1B3 inhibition potential by investigational drugs is of interest during clinical drug development due to various adverse events associated with increased exposures of their substrates. Regulatory guidance documents on the in vitro assessment of OATP1B1/1B3 inhibition potential are conservative with up to a third of predictions resulting in false positives...
October 13, 2020: Clinical and Translational Science
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