keyword
https://read.qxmd.com/read/38564628/machine-learning-evaluation-for-identification-of-m-proteins-in-human-serum
#1
JOURNAL ARTICLE
Alexandros Sopasakis, Maria Nilsson, Mattias Askenmo, Fredrik Nyholm, Lillemor Mattsson Hultén, Victoria Rotter Sopasakis
Serum electrophoresis (SPEP) is a method used to analyze the distribution of the most important proteins in the blood. The major clinical question is the presence of monoclonal fraction(s) of antibodies (M-protein/paraprotein), which is essential for the diagnosis and follow-up of hematological diseases, such as multiple myeloma. Recent studies have shown that machine learning can be used to assess protein electrophoresis by, for example, examining protein glycan patterns to follow up tumor surgery. In this study we compared 26 different decision tree algorithms to identify the presence of M-proteins in human serum by using numerical data from serum protein capillary electrophoresis...
2024: PloS One
https://read.qxmd.com/read/38332688/n-linked-glycosylation-of-the-m-protein-variable-region-glycoproteogenomics-reveals-a-new-layer-of-personalized-complexity-in-multiple-myeloma
#2
JOURNAL ARTICLE
Pieter Langerhorst, Melissa Baerenfaenger, Purva Kulkarni, Simon Nadal, Charissa Wijnands, Merel A Post, Somayya Noori, Martijn M vanDuijn, Irma Joosten, Thomas Dejoie, Alain J van Gool, Jolein Gloerich, Dirk J Lefeber, Hans J C T Wessels, Joannes F M Jacobs
OBJECTIVES: Multiple myeloma (MM) is a plasma cell malignancy characterized by a monoclonal expansion of plasma cells that secrete a characteristic M-protein. This M-protein is crucial for diagnosis and monitoring of MM in the blood of patients. Recent evidence has emerged suggesting that N-glycosylation of the M-protein variable (Fab) region contributes to M-protein pathogenicity, and that it is a risk factor for disease progression of plasma cell disorders. Current methodologies lack the specificity to provide a site-specific glycoprofile of the Fab regions of M-proteins...
February 9, 2024: Clinical Chemistry and Laboratory Medicine: CCLM
https://read.qxmd.com/read/37499263/direct-mass-spectrometry-based-detection-and-antibody-sequencing-of-monoclonal-gammopathy-of-undetermined-significance-from-patient-serum-a-case-study
#3
JOURNAL ARTICLE
Weiwei Peng, Maurits A den Boer, Sem Tamara, Nadia J Mokiem, Sjors P A van der Lans, Albert Bondt, Douwe Schulte, Pieter-Jan Haas, Monique C Minnema, Suzan H M Rooijakkers, Arjan D van Zuilen, Albert J R Heck, Joost Snijder
Monoclonal gammopathy of undetermined significance (MGUS) is a plasma cell disorder characterized by the presence of a predominant monoclonal antibody (i.e., M-protein) in serum, without clinical symptoms. Here we present a case study in which we detect MGUS by liquid-chromatography coupled with mass spectrometry (LC-MS) profiling of IgG1 in human serum. We detected a Fab-glycosylated M-protein and determined the full heavy and light chain sequences by bottom-up proteomics techniques using multiple proteases, further validated by top-down LC-MS...
July 27, 2023: Journal of Proteome Research
https://read.qxmd.com/read/37046595/antibody-surface-profiling-identifies-glycoforms-in-multiple-myeloma-as-targets-for-immunotherapy-from-antibody-derivatives-to-mimetic-peptides-for-killing-tumor-cells
#4
JOURNAL ARTICLE
Mouldy Sioud, Anniken Olberg
Despite therapeutic advances in recent years, there are still unmet medical needs for patients with multiple myeloma (MM). Hence, new therapeutic strategies are needed. Using phage display for screening a large repertoire of single chain variable fragments (scFvs), we isolated several candidates that recognize a heavily sulfated MM-specific glycoform of the surface antigen syndecan-1 (CD138). One of the engineered scFv-Fc antibodies, named MM1, activated NK cells and induced antibody-dependent cellular cytotoxicity against MM cells...
March 23, 2023: Cancers
https://read.qxmd.com/read/36782078/increased-expression-of-cep72-predicts-poor-prognosis-in-multiple-myeloma
#5
JOURNAL ARTICLE
Dan Guo, Jinfeng Lu, Hao Ji, Zenghua Lin, Lemin Hong, Hongming Huang, Hong Liu
INTRODUCTION: Multiple myeloma (MM) is a fatal hematological malignancy and does not have adequate prognostic indicators. Previous studies indicate that CEP72 is closely related to tumorigenesis and tumor progression. However, the expression and function of CEP72 in multiple myeloma have yet to be elucidated. METHODS: In this study, we explored the correlation between CEP72 expression and clinicopathological characteristics as well as the impacts of CEP72 expression on the survival of MM patients...
February 13, 2023: International Journal of Laboratory Hematology
https://read.qxmd.com/read/36189210/site-specific-n-glycosylation-characterization-of-micro-monoclonal-immunoglobulins-based-on-ethcd-scehcd-ms-ms
#6
JOURNAL ARTICLE
Mengqi Luo, Yonghong Mao, Wenjuan Zeng, Shanshan Zheng, Huixian Li, Juanjuan Hu, Xinfang Xie, Yong Zhang
Monoclonal immunoglobulin produced by clonal plasma cells is the main cause in multiple myeloma and monoclonal gammopathy of renal significance. Because of the complicated purification method and the low stoichiometry of purified protein and glycans, site-specific N-glycosylation characterization for monoclonal immunoglobulin is still challenging. To profile the site-specific N-glycosylation of monoclonal immunoglobulins is of great interest. Therefore, in this study, we presented an integrated workflow for micro monoclonal IgA and IgG purification from patients with multiple myeloma in the HYDRASYS system, in-agarose-gel digestion, LC-MS/MS analysis without intact N-glycopeptide enrichment, and compared the identification performance of different mass spectrometry dissociation methods (EThcD-sceHCD, sceHCD, EThcD and sceHCD-pd-ETD)...
2022: Frontiers in Immunology
https://read.qxmd.com/read/36113628/characterizing-m-protein-light-chain-glycosylation-via-mass-spectrometry
#7
JOURNAL ARTICLE
Ira D Miller, Mindy C Kohlhagen, Paula M Ladwig, Surendra Dasari, Shaji Kumar, Angela Dispenzieri, Maria Alice V Willrich, David L Murray
OBJECTIVES: Monoclonal gammopathy of undetermined significance (MGUS) patients with M-proteins containing n-glycosylated light chains (GLC) have an increased risk for progression to symptomatic plasma cell disorders (PCD). Large-scale research involving the determination of glycan specific moieties is understudied due to the lack of clinically viable methods. This report documents a proof-of-concept glycan characterization method for patients with M-protein GLCs. DESIGN AND METHODS: Twenty-three previously characterized MGUS patients with glycosylated light chains identified by MASS-FIX were used for this study...
September 13, 2022: Clinical Biochemistry
https://read.qxmd.com/read/36018829/full-length-recombinant-antibodies-from-escherichia-coli-production-characterization-effector-function-fc-engineering-and-clinical-evaluation
#8
REVIEW
Md Harunur Rashid
Although several antibody fragments and antibody fragment-fusion proteins produced in Escherichia coli ( E. coli ) are approved as therapeutics for various human diseases, a full-length monoclonal or a bispecific antibody produced in E. coli has not yet been approved. The past decade witnessed substantial progress in expression of full-length antibodies in the E. coli cytoplasm and periplasm, as well as in cell-free expression systems. The equivalency of E. coli -produced aglycosylated antibodies and their mammalian cell-produced counterparts, with respect to biochemical and biophysical properties, including antigen binding, in vitro and in vivo serum stability, pharmacokinetics, and in vivo serum half-life, has been demonstrated...
January 2022: MAbs
https://read.qxmd.com/read/35320367/isomer-specific-biomarker-discovery-in-multiple-myeloma-with-dual-derivatized-n-glycans
#9
JOURNAL ARTICLE
Chang Wang, Chaoying Zhang, Xinchang Gao, Jin-Ming Lin
As one of the most important post-translational modifications, protein glycosylation plays vital role in various physiological processes. With multitudinous glycosyltransferases, N-glycans present structural diversity in linkages and branching styles. Structure-specific glycan profiling may provide more potential biological information than compositional profiling. In this work, N-glycans released from human serum samples were derivatized with reduction and methylamination prior to profiling using nanoLC-ESI-MS with PGC as stationary phase...
July 2022: Analytical and Bioanalytical Chemistry
https://read.qxmd.com/read/31637237/targeted-approaches-to-inhibit-sialylation-of-multiple-myeloma-in-the-bone-marrow-microenvironment
#10
REVIEW
Alessandro Natoni, Raghvendra Bohara, Abhay Pandit, Michael O'Dwyer
Aberrant glycosylation modulates different aspects of tumor biology, and it has long been recognized as a hallmark of cancer. Among the different forms of glycosylation, sialylation, the addition of sialic acid to underlying oligosaccharides, is often dysregulated in cancer. Increased expression of sialylated glycans has been observed in many types of cancer, including multiple myeloma, and often correlates with aggressive metastatic behavior. Myeloma, a cancer of plasma cells, develops in the bone marrow, and colonizes multiple sites of the skeleton including the skull...
2019: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/31408003/b-cells-suppress-medullary-granulopoiesis-by-an-extracellular-glycosylation-dependent-mechanism
#11
JOURNAL ARTICLE
Eric E Irons, Melissa M Lee-Sundlov, Yuqi Zhu, Sriram Neelamegham, Karin M Hoffmeister, Joseph Ty Lau
The immune response relies on the integration of cell-intrinsic processes with cell-extrinsic cues. During infection, B cells vacate the marrow during emergency granulopoiesis but return upon restoration of homeostasis. Here we report a novel glycosylation-mediated crosstalk between marrow B cells and hematopoietic progenitors. Human B cells secrete active ST6GAL1 sialyltransferase that remodels progenitor cell surface glycans to suppress granulopoiesis. In mouse models, ST6GAL1 from B cells alters the sialylation profile of bone marrow populations, and mature IgD+ B cells were enriched in sialylated bone marrow niches...
August 13, 2019: ELife
https://read.qxmd.com/read/30905462/serum-%C3%AE-l-fucosidase-activities-are-significantly-increased-in-patients-with-preeclampsia
#12
JOURNAL ARTICLE
Meng Zhang, Lin Wang, Haiping Zhang, Juan Cong, Lijuan Zhang
Fucosylated glycans are essential molecules that facilitate signal transductions in several signal pathways and play important roles in development, inflammation, infection, and tumor metastasis. The fucosylated glycans are difficult to be developed into clinical biomarkers due to their complicated structures, but the decreased or increased activities of serum α-l-fucosidase, the lysosomal enzyme required for fucosylated glycan degradation, are diagnostic biomarker for patients with fucosidosis and hepatocellular carcinoma, respectively...
2019: Progress in Molecular Biology and Translational Science
https://read.qxmd.com/read/30844485/serum-protein-n-glycosylation-changes-in-multiple-myeloma
#13
JOURNAL ARTICLE
Zejian Zhang, Marita Westhrin, Albert Bondt, Manfred Wuhrer, Therese Standal, Stephanie Holst
BACKGROUND: Multiple myeloma is characterized by clonal proliferation of malignant plasma cells in the bone marrow that produce monoclonal immunoglobulins. N-glycosylation changes of these monoclonal immunoglobulins have been reported in multiple myeloma, but previous studies only detected limited serum N-glycan features. METHODS: Here, a more detailed study of the human serum N-glycome of 91 multiple myeloma patients and 51 controls was performed. We additionally analyzed sequential samples from patients (n = 7) which were obtained at different time points during disease development as well as 16 paired blood serum and bone marrow plasma samples...
May 2019: Biochimica et Biophysica Acta. General Subjects
https://read.qxmd.com/read/30813402/loss-of-stromal-galectin-1-enhances-multiple-myeloma-development-emphasis-on-a-role-in-osteoclasts
#14
JOURNAL ARTICLE
Joséphine Muller, Elodie Duray, Margaux Lejeune, Sophie Dubois, Erwan Plougonven, Angélique Léonard, Paola Storti, Nicola Giuliani, Martine Cohen-Solal, Ute Hempel, Victor L Thijssen, Yves Beguin, Roy Heusschen, Jo Caers
Multiple myeloma osteolytic disease is caused by an uncoupled bone-remodelling process with an increased osteoclast activity. Disease development relies on interactions between myeloma cells and bone marrow stromal cells. Recent findings suggest a role for glycan-binding proteins in myeloma microenvironment. Here, we investigated lectins involved in osteoclastogenesis and their role in myeloma bone disease. Microarray data analysis showed a lower expression of galectin-1 (gal-1) in mature osteoclasts compared to monocytic progenitor cells, confirmed at the RNA and protein levels in osteoclast cultures...
February 23, 2019: Cancers
https://read.qxmd.com/read/30237983/multiple-roles-of-glycans-in-hematological-malignancies
#15
REVIEW
Xingchen Pang, Hongjiao Li, Feng Guan, Xiang Li
The three types of blood cells (red blood cells for carrying oxygen, white blood cells for immune protection, and platelets for wound clotting) arise from hematopoietic stem/progenitor cells in the adult bone marrow, and function in physiological regulation and communication with local microenvironments to maintain systemic homeostasis. Hematological malignancies are relatively uncommon malignant disorders derived from the two major blood cell lineages: myeloid (leukemia) and lymphoid (lymphoma). Malignant clones lose their regulatory mechanisms, resulting in production of a large number of dysfunctional cells and destruction of normal hematopoiesis...
2018: Frontiers in Oncology
https://read.qxmd.com/read/29306413/relative-quantitation-of-neutral-and-sialylated-n-glycans-using-stable-isotopic-labeled-d0-d5-benzoyl-chloride-by-maldi-ms
#16
JOURNAL ARTICLE
Chang Wang, Yike Wu, Liang Zhang, Bi-Feng Liu, Yawei Lin, Xin Liu
Quantitative analysis of glycans is an emerging field in glycomic research. Herein we present a rapid and effective dual-labeling strategy, in the combination of isotopic derivatization of N-glycosylamine-based glycans by d0/d5-benzoyl chloride and methylamidation of sialic acids, to relatively quantify both neutral and sialylated N-glycans simultaneously by MALDI-MS. The derivatization efficiencies were increased by microwave-accelerated deglycosylation which not only largely reduce the time of glycoprotein deglycosylation but also inhibit the hydrolysis of intermediate glycosylamines produced by PNGase F digestion...
March 9, 2018: Analytica Chimica Acta
https://read.qxmd.com/read/28116769/capillary-electrophoresis-analysis-of-n-glycosylation-changes-of-serum-paraproteins-in-multiple-myeloma
#17
JOURNAL ARTICLE
Zsuzsanna Kovacs, Adam Simon, Zoltan Szabo, Zsolt Nagy, Laszlo Varoczy, Ildiko Pal, Eszter Csanky, Andras Guttman
Multiple myeloma (MM) is an immedicable malignancy of the human plasma cells producing abnormal antibodies (also referred to as paraproteins) leading to kidney problems and hyperviscosity syndrome. In this paper, we report on the N-glycosylation analysis of paraproteins from total human serum as well as the fragment crystallizable region (Fc ) and fragment antigen binding (Fab ) κ/λ light chain fractions of papain digested immunoglobulins from multiple myeloma patients. CE-LIF detection was used for the analysis of the N-glycans after endoglycosidase (PNGase F) mediated sugar release and fluorophore labeling (APTS)...
September 2017: Electrophoresis
https://read.qxmd.com/read/28038447/proteome-alterations-associated-with-transformation-of-multiple-myeloma-to-secondary-plasma-cell-leukemia
#18
JOURNAL ARTICLE
Alexey Zatula, Aida Dikic, Celine Mulder, Animesh Sharma, Cathrine B Vågbø, Mirta M L Sousa, Anders Waage, Geir Slupphaug
Plasma cell leukemia is a rare and aggressive plasma cell neoplasm that may either originate de novo (primary PCL) or by leukemic transformation of multiple myeloma (MM) to secondary PCL (sPCL). The prognosis of sPCL is very poor, and currently no standard treatment is available due to lack of prospective clinical studies. In an attempt to elucidate factors contributing to transformation, we have performed super-SILAC quantitative proteome profiling of malignant plasma cells collected from the same patient at both the MM and sPCL stages of the disease...
March 21, 2017: Oncotarget
https://read.qxmd.com/read/27936757/polyclonal-immunoglobulin-g-n-glycosylation-in-the-pathogenesis-of-plasma-cell-disorders
#19
JOURNAL ARTICLE
Stefan Mittermayr, Giao N Lê, Colin Clarke, Silvia Millán Martín, Anne-Marie Larkin, Peter O'Gorman, Jonathan Bones
The pathological progression from benign monoclonal gammopathy of undetermined significance (MGUS) to smoldering myeloma (SMM) and finally to active myeloma (MM) is poorly understood. Abnormal immunoglobulin G (IgG) glycosylation in myeloma has been reported. Using a glycomic platform composed of hydrophilic interaction UPLC, exoglycosidase digestions, weak anion-exchange chromatography, and mass spectrometry, polyclonal IgG N-glycosylation profiles from 35 patients [MGUS (n = 8), SMM (n = 5), MM (n = 8), complete-response (CR) post-treatment (n = 5), relapse (n = 4), healthy age-matched control (n = 5)] were characterized to map glycan structures in distinct disease phases of multiple myeloma...
February 3, 2017: Journal of Proteome Research
https://read.qxmd.com/read/27148485/targeting-selectins-and-their-ligands-in-cancer
#20
REVIEW
Alessandro Natoni, Matthew S Macauley, Michael E O'Dwyer
Aberrant glycosylation is a hallmark of cancer cells with increased evidence pointing to a role in tumor progression. In particular, aberrant sialylation of glycoproteins and glycolipids has been linked to increased immune cell evasion, drug evasion, drug resistance, tumor invasiveness, and vascular dissemination, leading to metastases. Hypersialylation of cancer cells is largely the result of overexpression of sialyltransferases (STs). Differentially, humans express twenty different STs in a tissue-specific manner, each of which catalyzes the attachment of sialic acids via different glycosidic linkages (α2-3, α2-6, or α2-8) to the underlying glycan chain...
2016: Frontiers in Oncology
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