keyword
https://read.qxmd.com/read/38650751/contribution-of-the-elrs-to-the-development-of-advanced-in-vitro-models
#1
REVIEW
María Puertas-Bartolomé, Desiré Venegas-Bustos, Sergio Acosta, José Carlos Rodríguez-Cabello
Developing in vitro models that accurately mimic the microenvironment of biological structures or processes holds substantial promise for gaining insights into specific biological functions. In the field of tissue engineering and regenerative medicine, in vitro models able to capture the precise structural, topographical, and functional complexity of living tissues, prove to be valuable tools for comprehending disease mechanisms, assessing drug responses, and serving as alternatives or complements to animal testing...
2024: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/38648956/tailoring-drug-release-from-long-acting-contraceptive-levonorgestrel-intrauterine-systems
#2
JOURNAL ARTICLE
Suraj Fanse, Quanying Bao, Yuan Zou, Yan Wang, Diane J Burgess
The wide array of polydimethylsiloxane (PDMS) variants available on the market, coupled with the intricate combination of additives in silicone polymers, and the incomplete understanding of drug release behavior make formulation development of levonorgestrel intrauterine systems (LNG-IUSs) formidable. Accordingly, the objectives of this work were to investigate the impact of excipients on formulation attributes and in vitro performance of LNG-IUSs, elucidate drug release mechanisms, and thereby improve product understanding...
April 20, 2024: Journal of Controlled Release
https://read.qxmd.com/read/38648167/psychoplastogenic-dyrk1a-inhibitors-with-therapeutic-effects-relevant-to-alzheimer-s-disease
#3
JOURNAL ARTICLE
Hunter T Warren, Hannah N Saeger, Robert J Tombari, Milan Chytil, Kurt Rasmussen, David E Olson
Tauopathy, neuronal atrophy, and psychological impairments are hallmarks of neurodegenerative diseases, such as Alzheimer's disease, that currently lack efficacious clinical treatments capable of rectifying these issues. To address these unmet needs, we used rational drug design to combine the pharmacophores of DYRK1A inhibitors and isoDMTs to develop psychoplastogenic DYRK1A inhibitors. Using this approach, we discovered a nonhallucinogenic compound capable of promoting cortical neuron growth and suppressing tau hyperphosphorylation while also having the potential to mitigate the biological and psychological symptoms of dementia...
April 22, 2024: Journal of Medicinal Chemistry
https://read.qxmd.com/read/38645642/understanding-vietnamese-chicken-farmers-knowledge-and-practices-related-to-antimicrobial-resistance-using-an-item-response-theory-approach
#4
JOURNAL ARTICLE
Sandra Nohrborg, Thinh Nguyen-Thi, Huyen Nguyen Xuan, Johanna Lindahl, Sofia Boqvist, Josef D Järhult, Ulf Magnusson
INTRODUCTION: Antimicrobial resistance (AMR) poses a threat to animal and human health, as well as food security and nutrition. Development of AMR is accelerated by over- and misuse of antimicrobials as seen in many livestock systems, including poultry production. In Vietnam, high AMR levels have been reported previously within poultry production, a sector which is dominated by small-scale farming, even though it is intensifying. This study focuses on understanding small- and medium-scale chicken farmers' knowledge and practices related to AMR by applying an item response theory (IRT) approach, which has several advantages over simpler statistical methods...
2024: Frontiers in Veterinary Science
https://read.qxmd.com/read/38644407/dapagliflozin-promotes-browning-of-white-adipose-tissue-through-the-fgfr1-lkb1-ampk-signaling-pathway
#5
JOURNAL ARTICLE
Yue Lv, Chengrui Zhao, Qiuyan Jiang, Yilin Rong, Mingfeng Ma, Lili Liang, Weiping Li, Jiuxuan Zhang, Ning Xu, Huiwen Wu
BACKGROUND: Obesity is associated with a wide variety of metabolic disorders that impose significant burdens on patients and society. The "browning" phenomenon in white adipose tissue (WAT) has emerged as a promising therapeutic strategy to combat metabolic disturbances. However, though the anti-diabetic drug dapagliflozin (DAPA) is thought to promote "browning," the specific mechanism of this was previously unclear. METHODS: In this study, C57BL/6 J male mice were used to establish an obesity model by high-fat diet feeding, and 3T3-L1 cells were used to induce mature adipocytes and to explore the role and mechanism of DAPA in "browning" through a combination of in vitro and in vivo experiments...
April 21, 2024: Molecular Biology Reports
https://read.qxmd.com/read/38643540/a-rational-designed-multi-epitope-vaccine-elicited-robust-protective-efficacy-against-klebsiella-pneumoniae-lung-infection
#6
JOURNAL ARTICLE
Jingwen Liao, Xiaoli Zhang, Xi Zeng, Zhuo Zhao, Tianjun Sun, Zhenping Xia, Haiming Jing, Yue Yuan, Zhifu Chen, Qiang Gou, Liqun Zhao, Weijun Zhang, Quanming Zou, Jinyong Zhang
BACKGROUND: The emergence of drug-resistant strains of Klebsiella pneumoniae (K. pneumoniae) has become a significant challenge in the field of infectious diseases, posing an urgent need for the development of highly protective vaccines against this pathogen. METHODS AND RESULTS: In this study, we identified three immunogenic extracellular loops based on the structure of five candidate antigens using sera from K. pneumoniae infected mice. The sequences of these loops were linked to the C-terminal of an alpha-hemolysin mutant (mHla) from Staphylococcus aureus to generate a heptamer, termed mHla-EpiVac...
April 20, 2024: Biomedicine & Pharmacotherapy
https://read.qxmd.com/read/38637620/design-of-a-recombinant-asparaginyl-ligase-for-site-specific-modification-using-efficient-recognition-and-nucleophile-motifs
#7
JOURNAL ARTICLE
Jiabao Tang, Mengling Hao, Junxian Liu, Yaling Chen, Gulimire Wufuer, Jie Zhu, Xuejie Zhang, Tingquan Zheng, Mujin Fang, Shiyin Zhang, Tingdong Li, Shengxiang Ge, Jun Zhang, Ningshao Xia
Asparaginyl ligases have been extensively utilized as valuable tools for site-specific bioconjugation or surface-modification. However, the application is hindered by the laborious and poorly reproducible preparation processes, unstable activity and ambiguous substrate requirements. To address these limitations, this study employed a structure-based rational approach to obtain a high-yield and high-activity protein ligase called OaAEP1-C247A-aa55-351. It was observed that OaAEP1-C247A-aa55-351 exhibits appreciable catalytic activities across a wide pH range, and the addition of the Fe3+ metal ion effectively enhances the catalytic power...
April 18, 2024: Communications Chemistry
https://read.qxmd.com/read/38634809/detspace-a-web-server-for-engineering-detectable-pathways-for-bio-based-chemical-production
#8
JOURNAL ARTICLE
Hèctor Martín Lázaro, Ricardo Marín Bautista, Pablo Carbonell
Tackling climate change challenges requires replacing current chemical industrial processes through the rational and sustainable use of biodiversity resources. To that end, production routes to key bio-based chemicals for the bioeconomy have been identified. However, their production still remains inefficient in terms of titers, rates, and yields; because of the hurdles found when scaling up. In order to make production more efficient, strategies like automated screening and dynamic pathway regulation through biosensors have been applied as part of strain optimization...
April 18, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38633591/discovery-of-protease-activated-receptor-4-par4-tethered-ligand-antagonists-using-ultralarge-virtual-screening
#9
JOURNAL ARTICLE
Shannon T Smith, Jackson B Cassada, Lukas Von Bredow, Kevin Erreger, Emma M Webb, Trevor A Trombley, Jacob J Kalbfleisch, Brian J Bender, Irene Zagol-Ikapitte, Valerie M Kramlinger, Jacob L Bouchard, Sidnee G Mitchell, Maik Tretbar, Brian K Shoichet, Craig W Lindsley, Jens Meiler, Heidi E Hamm
Here, we demonstrate a structure-based small molecule virtual screening and lead optimization pipeline using a homology model of a difficult-to-drug G-protein-coupled receptor (GPCR) target. Protease-activated receptor 4 (PAR4) is activated by thrombin cleavage, revealing a tethered ligand that activates the receptor, making PAR4 a challenging target. A virtual screen of a make-on-demand chemical library yielded a one-hit compound. From the single-hit compound, we developed a novel series of PAR4 antagonists...
April 12, 2024: ACS Pharmacology & Translational Science
https://read.qxmd.com/read/38629172/virtual-screening-docking-and-designing-of-new-vegf-inhibitors-as-anti-cancer-agents
#10
JOURNAL ARTICLE
Shivkant Patel, Vinay Ranjan Singh, Ashok Kumar Suman, Surabhi Jain, Ashim Kumar Sen
BACKGROUND: VEGFR-2 tyrosine kinase inhibitors are receiving a lot of attention as prospective anticancer medications in the current drug discovery process. OBJECTIVE: This work aims to explore the PubChem library for novel VEGFR-2 kinase inhibitors. 1H-Indazole-containing drug AXITINIB, or AG-013736 (FDA approved), is chosen as a rational molecule for drug design. This scaffold proved its efficiency in treating cancer and other diseases as well. METHODS: The present study used the virtual screening of the database, protein preparation, grid creation, and molecular docking analyses...
2024: Current Drug Discovery Technologies
https://read.qxmd.com/read/38628804/chemical-space-profiling-of-sars-cov-2-pl-pro-using-dna-encoded-focused-libraries
#11
JOURNAL ARTICLE
Xudong Wang, Ying Zhu, Qingyi Zhao, Weiwei Lu, Yechun Xu, Hangchen Hu, Xiaojie Lu
DNA-encoded library (DEL) technology is gaining attention for its rapid construction and deconvolution capabilities. Our study explored a novel strategy using rational DELs tailored for the SARS-CoV-2 papain-like protease, which revealed new fragments. Structural changes post-DEL screening mimic traditional medicinal chemistry lead optimization. We unveiled unique aromatic structures offering an alternative optimization path. Notably, we identified superior binding fragments targeting the BL2 groove. Derivative 16 emerged as the most promising by exhibiting IC50 values of 0...
April 11, 2024: ACS Medicinal Chemistry Letters
https://read.qxmd.com/read/38627609/occurrence-antimicrobial-susceptibility-and-resistance-genes-of-staphylococcus-aureus-in-milk-and-milk-products-in-the-arsi-highlands-of-ethiopia
#12
JOURNAL ARTICLE
Abiot Deddefo, Gezahegne Mamo, Minda Asfaw, Adem Edao, Adem Hiko, Dereje Fufa, Mohammed Jafer, Melaku Sombo, Kebede Amenu
BACKGROUND: In Ethiopia, milk production and handling practices often lack proper hygiene measures, leading to the potential contamination of milk and milk products with Staphylococcus aureus (S. aureus), including methicillin-resistant strains, posing significant public health concerns. This study aimed to investigate the occurrence, antimicrobial susceptibility profiles and presence of resistance genes in S. aureus strains isolated from milk and milk products. METHODS: A cross-sectional study was conducted in the Arsi highlands, Oromia, Ethiopia from March 2022 to February 2023...
April 16, 2024: BMC Microbiology
https://read.qxmd.com/read/38624000/self-assembled-recombinant-elastin-and-globular-protein-vesicles-with-tunable-properties-for-diverse-applications
#13
JOURNAL ARTICLE
Mikaela A Gray, Mariela R Rodriguez-Otero, Julie A Champion
ConspectusVesicles are self-assembled structures comprised of a membrane-like exterior surrounding a hollow lumen with applications in drug delivery, artificial cells, and micro-bioreactors. Lipid or polymer vesicles are the most common and are made of lipids or polymers, respectively. They are highly useful structures for many applications but it can be challenging to decorate them with proteins or encapsulate proteins in them, owing to the use of organic solvent in their formation and the large size of proteins relative to lipid or polymer molecules...
April 16, 2024: Accounts of Chemical Research
https://read.qxmd.com/read/38620134/rational-design-of-a-novel-class-of-human-clpp-agonists-through-a-ring-opening-strategy-with-enhanced-antileukemia-activity
#14
JOURNAL ARTICLE
Xinrong Xiang, Zhengyi Dai, Baozhu Luo, Ninglin Zhao, Song Liu, Jing Sui, Jiasheng Huang, Yuanzheng Zhou, Jinlong Gu, Jiangnan Zhang, Tao Yang, Rui Bao, Youfu Luo
The activation of Homo sapiens Casein lysing protease P (HsClpP) by a chemical or genetic strategy has been proved to be a new potential therapy in acute myeloid leukemia (AML). However, limited efficacy has been achieved with classic agonist imipridone ONC201 . Here, a novel class of HsClpP agonists is designed and synthesized using a ring-opening strategy based on the lead compound 1 reported in our previous study. Among these novel scaffold agonists, compound 7k exhibited remarkably enhanced proteolytic activity of HsClpP (EC50 = 0...
April 15, 2024: Journal of Medicinal Chemistry
https://read.qxmd.com/read/38619704/vascularized-tumor-models-for-the-evaluation-of-drug-delivery-systems-a-paradigm-shift
#15
REVIEW
Elliot Lopez-Vince, Claire Wilhelm, Teresa Simon-Yarza
As the conversion rate of preclinical studies for cancer treatment is low, user-friendly models that mimic the pathological microenvironment and drug intake with high throughput are scarce. Animal models are key, but an alternative to reduce their use would be valuable. Vascularized tumor-on-chip models combine great versatility with scalable throughput and are easy to use. Several strategies to integrate both tumor and vascular compartments have been developed, but few have been used to assess drug delivery...
April 15, 2024: Drug Delivery and Translational Research
https://read.qxmd.com/read/38617895/analysis-of-a-serious-adverse-reaction-of-pulmonary-fibrosis-caused-by-dronedarone
#16
Yuyan Chen, Zhendong Fu, Xue Wen, Mingxia Zhang, Qiong Min, Peng Wang, Jin Zhang, Jun Ren, Wenbin Li, Rong Wang
OBJECTIVE: This study aims to analyze a severe adverse reaction of pulmonary fibrosis induced by dronedarone hydrochloride tablets, and to provide a reference for clinical rational medication through drug precautions. METHODS: A case of pulmonary fibrosis induced by dronedarone hydrochloride tablets, along with related literature was retrospectively analyzed. RESULTS: Patients over 65 years old with a history of exposure to amiodarone may increase the incidence of pulmonary toxicity induced by dronedarone, and dronedarone should not be selected as a substitute treatment drug for patients with amiodarone-induced pulmonary toxicity...
2024: Current Therapeutic Research, Clinical and Experimental
https://read.qxmd.com/read/38617842/therapy-for-hormone-receptor-positive-human-epidermal-growth-receptor-2-negative-metastatic-breast-cancer-following-treatment-progression-via-cdk4-6-inhibitors-a-literature-review
#17
REVIEW
Meixi Ye, Hao Xu, Jinhua Ding, Li Jiang
Endocrine therapy (ET) with a cyclin-dependent kinase 4/6 inhibitor (CDK4/6i) is currently the first-line standard treatment for most patients with hormone receptor-positive (HR+) and human epidermal growth receptor 2-negative (HER2-) metastatic or advanced breast cancer. However, the majority of tumors response to and eventually develop resistance to CDK4/6is. The mechanisms of resistance are poorly understood, and the optimal postprogression treatment regimens and their sequences continue to evolve in the rapidly changing treatment landscape...
2024: Breast Cancer: Targets and Therapy
https://read.qxmd.com/read/38617265/the-tradeoffs-between-persistence-and-mutation-rates-at-sub-inhibitory-antibiotic-concentrations-in-staphylococcus-aureus
#18
Alysha S Ismail, Brandon A Berryhill, Teresa Gil-Gil, Joshua A Manuel, Andrew P Smith, Fernando Baquero, Bruce R Levin
The rational design of the antibiotic treatment of bacterial infections employs these drugs to reach concentrations that exceed the minimum needed to prevent the replication of the target bacteria. However, within a treated patient, spatial and physiological heterogeneity promotes antibiotic gradients such that the concentration of antibiotics at specific sites is below the minimum needed to inhibit bacterial growth. Here, we investigate the effects of sub-inhibitory antibiotic concentrations on three parameters central to bacterial infection and the success of antibiotic treatment, using in vitro experiments with Staphylococcus aureus and mathematical-computer simulation models...
April 1, 2024: bioRxiv
https://read.qxmd.com/read/38616656/pushing-the-frontiers-of-cancer-research-highlights-from-the-frontiers-in-cancer-science-conference-2023
#19
JOURNAL ARTICLE
Yi Fei Lee, Leilei Chen, Valerie Chew, Edward Kai-Hua Chow, Lih-Wen Deng, Walter Hunziker, Ann Siew Gek Lee, Geraldine Leong, Joanne Ngeow, Shazib Pervaiz, Kanaga Sabapathy, Anders J Skanderup, Raghav Sundar, Yvonne Tay, David M Virshup, Sunny H Wong, Vinay Tergaonkar, Wai Leong Tam
The 15th annual Frontiers in Cancer Science (FCS) conference gathered scientific experts who shared the latest research converging upon several themes of cancer biology. These themes included the dysregulation of metabolism, cell death, and other signaling processes in cancer cells; using patient "omics" datasets and single-cell and spatial approaches to investigate heterogeneity, understand therapy resistance, and identify targets; innovative strategies for inhibiting tumors, including rational drug combinations and improved drug delivery mechanisms; and advances in models that can facilitate screening for cancer vulnerabilities and drug testing...
April 15, 2024: Cancer Research
https://read.qxmd.com/read/38612660/advancements-in-regenerative-hydrogels-in-skin-wound-treatment-a-comprehensive-review
#20
REVIEW
Gabriel Olteanu, Sorinel Marius Neacșu, Florin Alexandru Joița, Adina Magdalena Musuc, Elena Carmen Lupu, Corina-Bianca Ioniță-Mîndrican, Dumitru Lupuliasa, Magdalena Mititelu
This state-of-the-art review explores the emerging field of regenerative hydrogels and their profound impact on the treatment of skin wounds. Regenerative hydrogels, composed mainly of water-absorbing polymers, have garnered attention in wound healing, particularly for skin wounds. Their unique properties make them well suited for tissue regeneration. Notable benefits include excellent water retention, creating a crucially moist wound environment for optimal healing, and facilitating cell migration, and proliferation...
March 29, 2024: International Journal of Molecular Sciences
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