keyword
https://read.qxmd.com/read/38040125/enterovirus-d68-vrna-induces-type-iii-ifn-production-via-mda5
#21
JOURNAL ARTICLE
Chi-Chong Chio, Hio-Wai Chan, Shih-Hsiang Chen, Hsing-I Huang
Enterovirus D68 (EV-D68) primarily spreads through the respiratory tract and causes respiratory symptoms in children and acute flaccid myelitis (AFM). Type III interferons (IFNs) play a critical role in inhibiting viral growth in respiratory epithelial cells. However, the mechanism by which EV-D68 induces type III IFN production is not yet fully understood. In this study, we show that EV-D68 infection stimulates Calu-3 cells to secrete IFN-λ. The transfection of EV-D68 viral RNA (vRNA) stimulated IFN-λ via MDA5...
November 29, 2023: Virus Research
https://read.qxmd.com/read/37984566/licochalcone-a-regulates-viral-ires-activity-to-inhibit-enterovirus-replication
#22
JOURNAL ARTICLE
Yu-Ting Chuang, Yu-Li Lin, Jing-Yi Lin
Enterovirus D68 (EV-D68), belonging to the genus Enterovirus of the Picornavirus family, is an emerging pathogen that can cause neurological and respiratory diseases in children. However, there is little understanding of the pathogenesis of EV-D68, and no effective vaccine or drug for the prevention or treatment of the diseases caused by this virus is available. Autophagy is a cellular process that targets cytoplasmic proteins or organelles to the lysosomes for degradation. Enteroviruses strategically harness the host autophagy pathway to facilitate the completion of their life cycle...
November 18, 2023: Antiviral Research
https://read.qxmd.com/read/37977075/changes-in-enterovirus-epidemiology-after-easing-of-lockdown-measures
#23
JOURNAL ARTICLE
Erley Lizarazo Forero, Marjolein Knoester, Lilli Gard, Alewijn Ott, Afke H Brandenburg, Matthew B B McCall, Hubert G M Niesters, Coretta Van Leer-Buter
INTRODUCTION: Public health measures aimed at controlling transmission of SARS-CoV-2, otherwise known as "lockdown" measures, had profound effects on circulation of non-SARS viruses, many of which decreased to very low levels.  The interrupted transmission of these viruses may have lasting effects. Some of the influenza clades seem to have disappeared during this period, a phenomenon which is described as a "funnel effect". It is currently unknown if the lockdown measures had any effect on the diversity of circulating viruses, other than influenza...
December 2023: Journal of Clinical Virology
https://read.qxmd.com/read/37977074/clinical-and-molecular-characteristics-of-the-2022-enterovirus-d68-outbreak-among-hospitalized-children-ohio-usa
#24
JOURNAL ARTICLE
Raquel Giacomelli Cao, Asuncion Mejias, Amy L Leber, Huanyu Wang
BACKGROUND: Enterovirus-D68 (EV-D68) has appeared biennially in the United States following the 2014 outbreak. It has gained epidemiologic and clinical relevance and was identified as an important pathogen associated with severe respiratory and central nervous system diseases. We aim to describe the clinical and molecular characteristics of the post-pandemic 2022 Enterovirus-D68 outbreak in children evaluated in a tertiary pediatric hospital in Columbus, Ohio. METHODS: EV-D68 RT-PCR was performed on nasopharyngeal specimens collected during Jun-Nov 2022 from children (<18 years), identified by 1) physician-order or 2) random selection of 10-15 specimens weekly that were Rhinovirus/Enterovirus-positive by physician-ordered respiratory virus panel...
December 2023: Journal of Clinical Virology
https://read.qxmd.com/read/37910158/estimating-prevalence-of-enterovirus-d111-in-human-and-non-human-primate-populations-using-cross-sectional-serology
#25
JOURNAL ARTICLE
Everlyn Kamau, Mael Bessaud, Manasi Majumdar, Javier Martin, Peter Simmonds, Heli Harvala
Enteroviruses primarily affect young children with a varying severity of disease. Recent outbreaks of severe respiratory and neurological disease due to EV-D68 and EV-A71, as well as atypical hand-foot-and-mouth-disease due to CVA6, have brought to light the potency of enteroviruses to emerge as severe human pathogens. Enterovirus D111 (EV-D111) is an enteric pathogen initially detected in Central Africa in human and wildlife samples and was recently detected in environmental samples. The natural history and epidemiology of EV-D111 are poorly studied...
November 2023: Journal of General Virology
https://read.qxmd.com/read/37909766/an-unexpected-ph-sensitive-step-of-the-enterovirus-d68-lifecycle
#26
JOURNAL ARTICLE
David Aponte-Diaz, Matthew R Vogt, Craig E Cameron
Enterovirus D68 (EV-D68) contributes significantly to pathogen-induced respiratory illnesses and severe neurological disorders like acute flaccid myelitis. We lack EV-D68 preventive measures, and knowledge of its molecular and cellular biology is incomplete. Multiple studies have highlighted the role of membrane compartments and autophagy during picornavirus multiplication. Galitska et al. found that EV-D68 also exploits cellular autophagic compartments and relies on autophagic machinery as pro-viral factors (G...
November 1, 2023: MBio
https://read.qxmd.com/read/37877702/comparison-of-metagenomic-and-targeted-methods-for-sequencing-human-pathogenic-viruses-from-wastewater
#27
JOURNAL ARTICLE
Harry T Child, George Airey, Daniel M Maloney, Abby Parker, Jonathan Wild, Suzie McGinley, Nicholas Evens, Jonathan Porter, Kate Templeton, Steve Paterson, Ronny van Aerle, Matthew J Wade, Aaron R Jeffries, Irene Bassano
Wastewater-based epidemiology is a powerful tool for monitoring the emergence and spread of viral pathogens at the population scale. Typical polymerase chain reaction (PCR)-based methods of quantitative and genomic monitoring of viruses in wastewater provide high sensitivity and specificity. However, these methods are limited to the surveillance of target viruses in a single assay and require prior knowledge of the target genome(s). Metagenomic sequencing methods may represent a target-agnostic approach to viral wastewater monitoring, allowing for the detection of a broad range of target viruses, including potentially novel and emerging pathogens...
October 25, 2023: MBio
https://read.qxmd.com/read/37877593/trends-of-enterovirus-d68-concentrations-in-wastewater-california-usa-february-2021-april-2023
#28
JOURNAL ARTICLE
Alexandria B Boehm, Debra A Wadford, Bridgette Hughes, Dorothea Duong, Alice Chen, Tasha Padilla, Chelsea Wright, Lisa Moua, Teal Bullick, Maria Salas, Christina Morales, Bradley J White, Carol A Glaser, Duc J Vugia, Alexander T Yu, Marlene K Wolfe
In this retrospective study, we measured enterovirus D68 (EV-D68) genomic RNA in wastewater solids longitudinally at 2 California, USA, wastewater treatment plants twice per week for 26 months. EV-D68 RNA was undetectable except when concentrations increased from mid-July to mid-December 2022, which coincided with a peak in confirmed EV-D68 cases.
November 2023: Emerging Infectious Diseases
https://read.qxmd.com/read/37877582/duration-of-enterovirus-d68-rna-shedding-in-the-upper-respiratory-tract-and-transmission-among-household-contacts-colorado-usa
#29
JOURNAL ARTICLE
Hai Nguyen-Tran, Careese Thompson, Molly Butler, Kristen R Miller, Laura Pyle, Sarah Jung, Shannon Rogers, Terry Fei Fan Ng, Janell Routh, Samuel R Dominguez, Kevin Messacar
Enterovirus D68 (EV-D68) causes cyclical outbreaks of respiratory disease and acute flaccid myelitis. EV-D68 is primarily transmitted through the respiratory route, but the duration of shedding in the respiratory tract is unknown. We prospectively enrolled 9 hospitalized children with EV-D68 respiratory infection and 16 household contacts to determine EV-D68 RNA shedding dynamics in the upper respiratory tract through serial midturbinate specimen collections and daily symptom diaries. Five (31.3%) household contacts, including 3 adults, were EV-D68-positive...
November 2023: Emerging Infectious Diseases
https://read.qxmd.com/read/37857371/structure-based-lead-optimization-of-enterovirus-d68-2a-protease-inhibitors
#30
JOURNAL ARTICLE
Bin Tan, Chang Liu, Kan Li, Prakash Jadhav, George Lambrinidis, Lan Zhu, Linda Olson, Haozhou Tan, Yu Wen, Antonios Kolocouris, Wei Liu, Jun Wang
Enterovirus D68 (EV-D68) virus is a nonpolio enterovirus that typically causes respiratory illness and, in severe cases, can lead to paralysis and death in children. There is currently no vaccine or antiviral for EV-D68. We previously discovered the viral 2A protease (2Apro ) as a viable antiviral drug target and identified telaprevir as a 2Apro inhibitor. 2Apro is a viral cysteine protease that cleaves the viral VP1-2A polyprotein junction. In this study, we report the X-ray crystal structures of EV-D68 2Apro , wild-type, and the C107A mutant and the structure-based lead optimization of telaprevir...
October 19, 2023: Journal of Medicinal Chemistry
https://read.qxmd.com/read/37852802/in%C3%A2-vitro-and-in%C3%A2-vivo-models-for-the-study-of-ev-d68-infection
#31
REVIEW
Yuan Teng Hooi, Vinod R M T Balasubramaniam
Enterovirus D68 (EV-D68) is one of hundreds of non-polio enteroviruses that typically cause cold-like respiratory illness. The first EV-D68 outbreak in the United States in 2014 aroused widespread concern among the public and health authorities. The infection was found to be associated with increased surveillance of acute flaccid myelitis, a neurological condition that causes limb paralysis in conjunction with spinal cord inflammation. In vitro studies utilising two-dimensional (2D) and three-dimensional (3D) culture systems have been employed to elucidate the pathogenic mechanism of EV-D68...
September 25, 2023: Pathology
https://read.qxmd.com/read/37850626/sirt-1-is-required-for-release-of-enveloped-enteroviruses
#32
JOURNAL ARTICLE
Alagie Jassey, James Logue, Stuart Weston, Michael A Wagner, Ganna Galitska, Katelyn Miller, Matthew Frieman, William T Jackson
Enterovirus D68 (EV-D68) is a re-emerging enterovirus that causes acute respiratory illness in infants and has recently been linked to Acute Flaccid Myelitis. Here, we show that the histone deacetylase, SIRT-1, is essential for autophagy and EV-D68 infection. Knockdown of SIRT-1 inhibits autophagy and reduces EV-D68 extracellular titers. The proviral activity of SIRT-1 does not require its deacetylase activity or functional autophagy. SIRT-1's proviral activity is, we demonstrate, mediated through the repression of endoplasmic reticulum stress (ER stress)...
October 18, 2023: ELife
https://read.qxmd.com/read/37849401/the-picornaviridae-family-knowledge-gaps-animal-models-countermeasures-and-prototype-pathogens
#33
JOURNAL ARTICLE
Raul Andino, Karla Kirkegaard, Andrew Macadam, Vincent R Racaniello, Amy B Rosenfeld
Picornaviruses are nonenveloped particles with a single-stranded RNA genome of positive polarity. This virus family includes poliovirus, hepatitis A virus, rhinoviruses, and Coxsackieviruses. Picornaviruses are common human pathogens, and infection can result in a spectrum of serious illnesses, including acute flaccid myelitis, severe respiratory complications, and hand-foot-mouth disease. Despite research on poliovirus establishing many fundamental principles of RNA virus biology and the first transgenic animal model of disease for infection by a human virus, picornaviruses are understudied...
October 18, 2023: Journal of Infectious Diseases
https://read.qxmd.com/read/37827347/molecular-epidemiology-and-recombination-of-enterovirus-d68-in-china
#34
JOURNAL ARTICLE
Yingying Shi, Yongjuan Liu, Yanli Wu, Song Hu, Binlian Sun
Enterovirus D68 (EV-D68), a member of Enterovirus genus of the Picornaviridae family, mainly causes respiratory system-related diseases as well as neurological complications in some patients. At present, there is no effective vaccine or treatment for the virus. The aim of this research was to systematically analyse the molecular epidemiology, recombination and changes in the epitope of EV-D68 in China from 2008 to 2022. Through phylogenetic analysis based on VP1 sequences, it was found that there was limited information about EV-D68 infection before 2011 and that EV-D68 infection was dominated by the A2 gene subtype from 2011 to 2013 and the B3 genotype from 2014 to 2018, during which A2 and B3 were coprevalent and alternately prevalent...
October 10, 2023: Infection, Genetics and Evolution
https://read.qxmd.com/read/37819109/enterovirus-d68-capsid-formation-and-stability-requires-acidic-compartments
#35
JOURNAL ARTICLE
Ganna Galitska, Alagie Jassey, Michael A Wagner, Noah Pollack, Katelyn Miller, William T Jackson
Enterovirus D68 (EV-D68), a picornavirus traditionally associated with respiratory infections, has recently been linked to a polio-like paralytic condition known as acute flaccid myelitis. EV-D68 is understudied, and much of the field's understanding of this virus is based on studies of poliovirus. For poliovirus, we previously showed that low pH promotes virus capsid maturation, but here we show that, for EV-D68, inhibition of compartment acidification during a specific window of infection causes a defect in capsid formation and maintenance...
October 11, 2023: MBio
https://read.qxmd.com/read/37804367/insights-into-the-molecular-evolution-of-enterovirus-d68
#36
JOURNAL ARTICLE
Jonas Wolf
Enterovirus D68 (EV-D68) is a respiratory virus that primarily affects children and has been associated with sporadic outbreaks of respiratory illness worldwide. In the present study, temporal spreading and molecular evolution of EV-D68 clades (A1, A2, B, B1, B2, B3, and C) were evaluated. Bayesian coalescent analysis was performed to study viral evolution. Data from 976 whole-genome sequences (WGSs) collected between 1977 and 2022 were evaluated. For A1, the most recent common ancestor was dated to 2005-04-17 in the USA; for A2 it was 2003-12-23 in China; for B, it was 2003-07-06 in China; for B1, it was 2010-03-21 in Vietnam; for B2, it was 2006-11-25 in Vietnam; for B3, it was 2011-01-15 in China; and for C, it was 2000-06-27 in the USA...
October 7, 2023: Archives of Virology
https://read.qxmd.com/read/37793363/seroprevalence-of-enterovirus-d68-infection-among-humans-a-systematic-review-and-meta-analysis
#37
Yingying Shi, Qinqin Ran, Xiaochen Wang, Lu Shi
INTRODUCTION: Human enterovirus D68 (EV-D68), which belongs to enteroviruses of the small RNA family, is a type of enterovirus that can cause acute respiratory tract infection and central nervous system diseases. This study systematically analysed and summarized EV-D68 antibody studies in databases and identified the seropositivity rates of different regions, ages, and sexes. METHODS: Meta-analysis was performed using STATA 16.0 software. I2 and Q tests were used to analyse the heterogeneity of the included studies...
October 4, 2023: Intervirology
https://read.qxmd.com/read/37761277/ivdr-analysis-of-the-social-economic-and-practical-consequences-of-the-application-of-an-ordinance-of-the-in-vitro-diagnostic-ordinance-in-switzerland
#38
JOURNAL ARTICLE
Alix T Coste, Adrian Egli, Jacques Schrenzel, Beatrice Nickel, Andrea Zbinden, Reto Lienhard, Alexis Dumoulin, Martin Risch, Gilbert Greub
IVDR regulation represents a major challenge for diagnostic microbiology laboratories. IVDR complicates a broad range of aspects and poses a risk given the high diversity of pathogens (including rare but highly virulent microbes) and the large variety of samples submitted for analysis. The regular emergence of new pathogens (including Echovirus E-11, Adenovirus 41, Monkeypox virus, Alongshan virus, and Enterovirus D68, as recent examples in Europe in the post SARS-CoV-2 era) is another factor that makes IVDR regulation risky, because its detrimental effect on production of in-house tests will negatively impact knowledge and expertise in the development of new diagnostic tests...
September 11, 2023: Diagnostics
https://read.qxmd.com/read/37674335/first-detection-of-enterovirus-d68-in-korean-children-september-2022
#39
JOURNAL ARTICLE
Ki Wook Yun, Bin Ahn, Sung Hwan Choi, Da Yeon Kang, Taek Soo Kim, Mi Kyung Lee, Kyoung Un Park, Eun Hwa Choi
BACKGROUND: Enterovirus D68 (EV-D68) is a re-emerging pathogen that is particularly common in children and may cause asthma-like respiratory infection and acute flaccid myelitis. However, in Korea, EV-D68 has never been reported thus far. This study aimed to identify EV-D68 from nasopharyngeal aspirates (NPAs) in Korean children with a respiratory tract infection. MATERIALS AND METHODS: The EV-D68 reference strain was purchased and blindly used to assess the detection ability of three commercial and one in-house mRT-PCR kit in 2018...
July 26, 2023: Infection & Chemotherapy
https://read.qxmd.com/read/37657555/enterovirus-d68-infection-upregulates-socs3-expression-to-inhibit-jak-stat3-signaling-and-antagonize-the-innate-interferon-response-of-the-host
#40
JOURNAL ARTICLE
Yuling Zhang, Leling Xu, Zhe Zhang, Xin Su, Zhiyun Wang, Tao Wang
Enterovirus D68 (EV-D68) can cause respiratory diseases and acute flaccid paralysis, posing a great threat to public health. Interferons are cytokines secreted by host cells that have broad-spectrum antiviral effects, inducing the expression of hundreds of interferon-stimulated genes (ISGs). EV-D68 activates ISG expression early in infection, but at a later stage, the virus suppresses ISG expression, a strategy evolved by EV-D68 to antagonize interferons. Here, we explore a host protein, suppressor of cytokine signaling 3 (SOCS3), is upregulated during EV-D68 infection and antagonizes the antiviral effects of type I interferon...
August 30, 2023: Virologica Sinica
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