keyword
https://read.qxmd.com/read/38725656/readthrough-induced-misincorporated-amino-acid-ratios-guide-mutant-specific-therapeutic-approaches-for-two-cftr-nonsense-mutations
#1
JOURNAL ARTICLE
Aiswarya Premchandar, Ruiji Ming, Abed Baiad, Dillon F Da Fonte, Haijin Xu, Denis Faubert, Guido Veit, Gergely L Lukacs
Cystic fibrosis (CF) is a monogenic disease caused by mutations in the CF transmembrane conductance regulator ( CFTR ) gene. Premature termination codons (PTCs) represent ∼9% of CF mutations that typically cause severe expression defects of the CFTR anion channel. Despite the prevalence of PTCs as the underlying cause of genetic diseases, understanding the therapeutic susceptibilities of their molecular defects, both at the transcript and protein levels remains partially elucidated. Given that the molecular pathologies depend on the PTC positions in CF, multiple pharmacological interventions are required to suppress the accelerated nonsense-mediated mRNA decay (NMD), to correct the CFTR conformational defect caused by misincorporated amino acids, and to enhance the inefficient stop codon readthrough...
2024: Frontiers in Pharmacology
https://read.qxmd.com/read/38715347/pathophysiological-significance-and-modulation-of-the-transient-receptor-potential-canonical-3-ion-channel
#2
REVIEW
Vijay K Boda, Nelufar Yasmen, Jianxiong Jiang, Wei Li
Transient receptor potential canonical 3 (TRPC3) protein belongs to the TRP family of nonselective cation channels. Its activation occurs by signaling through a G protein-coupled receptor (GPCR) and a phospholipase C-dependent (PLC) pathway. Perturbations in the expression of TRPC3 are associated with a plethora of pathophysiological conditions responsible for disorders of the cardiovascular, immune, and central nervous systems. The recently solved cryo-EM structure of TRPC3 provides detailed inputs about the underlying mechanistic aspects of the channel, which in turn enables more efficient ways of designing small-molecule modulators...
May 7, 2024: Medicinal Research Reviews
https://read.qxmd.com/read/38701037/structural-basis-of-chorismate-isomerization-by-arabidopsis-isochorismate-synthase1
#3
JOURNAL ARTICLE
Zihui Su, Chengqun Niu, Sicong Zhou, Guolyu Xu, Pingchuan Zhu, Qiang Fu, Yuelin Zhang, Zhenhua Ming
Salicylic acid (SA) plays a crucial role in plant defense against biotrophic and semi-biotrophic pathogens. In Arabidopsis (Arabidopsis thaliana), isochorismate synthase 1 (AtICS1) is a key enzyme for the pathogen-induced biosynthesis of SA via catalytic conversion of chorismate into isochorismate, an essential precursor for SA synthesis. Despite the extensive knowledge of ICS1-related menaquinone, siderophore, tryptophan (MST) enzymes in bacteria, the structural mechanisms for substrate binding and catalysis in plant isochorismate synthase (ICS) enzymes are unknown...
May 3, 2024: Plant Physiology
https://read.qxmd.com/read/38698206/structural-basis-of-trpv1-modulation-by-endogenous-bioactive-lipids
#4
JOURNAL ARTICLE
William R Arnold, Adamo Mancino, Frank R Moss, Adam Frost, David Julius, Yifan Cheng
TRP ion channels are modulated by phosphoinositide lipids, but the underlying structural mechanisms remain unclear. The capsaicin- and heat-activated receptor, TRPV1, has served as a model for deciphering lipid modulation, which is relevant to understanding how pro-algesic agents enhance channel activity in the setting of inflammatory pain. Identification of a pocket within the TRPV1 transmembrane core has provided initial clues as to how phosphoinositide lipids bind to and regulate the channel. Here we show that this regulatory pocket in rat TRPV1 can accommodate diverse lipid species, including the inflammatory lipid lysophosphatidic acid, whose actions are determined by their specific modes of binding...
May 2, 2024: Nature Structural & Molecular Biology
https://read.qxmd.com/read/38694510/the-ion-channel-trpv5-regulates-b-cell-signaling-and-activation
#5
JOURNAL ARTICLE
Trisha Mahtani, Hena Sheth, L K Smith, Leshawn Benedict, Aurelie Brecier, Nader Ghasemlou, Bebhinn Treanor
INTRODUCTION: B-cell activation triggers the release of endoplasmic reticulum calcium stores through the store-operated calcium entry (SOCE) pathway resulting in calcium influx by calcium release-activated calcium (CRAC) channels on the plasma membrane. B-cell-specific murine knockouts of SOCE do not impact humoral immunity suggesting that alternative channels may be important. METHODS: We identified a member of the calcium-permeable transient receptor potential (TRP) ion channel family, TRPV5, as a candidate channel expressed in B cells by a quantitative polymerase chain reaction (qPCR) screen...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38691614/trpv3-activation-by-different-agonists-accompanied-by-lipid-dissociation-from-the-vanilloid-site
#6
JOURNAL ARTICLE
Kirill D Nadezhdin, Arthur Neuberger, Lena S Khosrof, Irina A Talyzina, Jeffrey Khau, Maria V Yelshanskaya, Alexander I Sobolevsky
TRPV3 represents both temperature- and ligand-activated transient receptor potential (TRP) channel. Physiologically relevant opening of TRPV3 channels by heat has been captured structurally, while opening by agonists has only been observed in structures of mutant channels. Here, we present cryo-EM structures that illuminate opening and inactivation of wild-type human TRPV3 in response to binding of two types of agonists: either the natural cannabinoid tetrahydrocannabivarin (THCV) or synthetic agonist 2-aminoethoxydiphenylborane (2-APB)...
May 3, 2024: Science Advances
https://read.qxmd.com/read/38682595/current-and-emerging-drugs-for-the-treatment-of-pruritus-an-update-of-the-literature
#7
REVIEW
Rami H Mahmoud, Sarah G Brooks, Gil Yosipovitch
INTRODUCTION: Pruritus, particularly in its chronic form, often imposes significant suffering and reductions in patients' quality of life. The pathophysiology of itch is varied depending on disease context, creating opportunities for unique drug development and multimodal therapy. AREAS COVERED: The purpose of this article is to provide an update of the literature regarding current and emerging therapeutics in itch. We review the multitudes of drug targets available and corresponding drugs that have shown efficacy in clinical trials, with a particular emphasis on phase 2 and 3 trials and beyond...
April 29, 2024: Expert Opinion on Pharmacotherapy
https://read.qxmd.com/read/38682490/trp-channels-in-excitotoxicity
#8
REVIEW
Pengyu Zong, Nicholas Legere, Jianlin Feng, Lixia Yue
Glutamate excitotoxicity is a central mechanism contributing to cellular dysfunction and death in various neurological disorders and diseases, such as stroke, traumatic brain injury, epilepsy, schizophrenia, addiction, mood disorders, Huntington's disease, Alzheimer's disease, Parkinson's disease, multiple sclerosis, pathologic pain, and even normal aging-related changes. This detrimental effect emerges from glutamate binding to glutamate receptors, including α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors, N -methyl-d-aspartate receptors, kainate receptors, and GluD receptors...
April 29, 2024: Neuroscientist: a Review Journal Bringing Neurobiology, Neurology and Psychiatry
https://read.qxmd.com/read/38676362/the-physiological-role-of-trp-channels-in-sleep-and-circadian-rhythm
#9
REVIEW
Geoffrey Woodard, Juan A Rosado, He Li
TRP channels, are non-specific cationic channels that are involved in multiple physiological processes that include salivation, cellular secretions, memory extinction and consolidation, temperature, pain, store-operated calcium entry, thermosensation and functionality of the nervous system. Here we choose to look at the evidence that decisively shows how TRP channels modulate human neuron plasticity as it relates to the molecular neurobiology of sleep/circadian rhythm. There are numerous model organisms of sleep and circadian rhythm that are the results of the absence or genetic manipulation of the non-specific cationic TRP channels...
May 2024: Journal of Cellular and Molecular Medicine
https://read.qxmd.com/read/38671253/functional-and-structural-insights-into-activation-of-trpv2-by-weak-acids
#10
JOURNAL ARTICLE
Ferdinand M Haug, Ruth A Pumroy, Akshay Sridhar, Sebastian Pantke, Florian Dimek, Tabea C Fricke, Axel Hage, Christine Herzog, Frank G Echtermeyer, Jeanne de la Roche, Adrian Koh, Abhay Kotecha, Rebecca J Howard, Erik Lindahl, Vera Moiseenkova-Bell, Andreas Leffler
Transient receptor potential (TRP) ion channels are involved in the surveillance or regulation of the acid-base balance. Here, we demonstrate that weak carbonic acids, including acetic acid, lactic acid, and CO2 activate and sensitize TRPV2 through a mechanism requiring permeation through the cell membrane. TRPV2 channels in cell-free inside-out patches maintain weak acid-sensitivity, but protons applied on either side of the membrane do not induce channel activation or sensitization. The involvement of proton modulation sites for weak acid-sensitivity was supported by the identification of titratable extracellular (Glu495, Glu561) and intracellular (His521) residues on a cryo-EM structure of rat TRPV2 (rTRPV2) treated with acetic acid...
April 26, 2024: EMBO Journal
https://read.qxmd.com/read/38659811/polycystins-recruit-cargo-to-distinct-ciliary-extracellular-vesicle-subtypes
#11
Inna A Nikonorova, Elizabeth desRanleau, Katherine C Jacobs, Joshua Saul, Jonathon D Walsh, Juan Wang, Maureen M Barr
Therapeutic use of tiny extracellular vesicles (EVs) requires understanding cargo loading mechanisms. Here, we used a modular proximity label approach to identify EV cargo associated with the transient potential channel (TRP) polycystin PKD-2 of C. elegans . Polycystins are conserved receptor-TRP channel proteins affecting cilium function; dysfunction causes polycystic kidney disease in humans and mating deficits in C. elegans . Polycystin-2 EV localization is conserved from algae to humans, hinting at an ancient and unknown function...
April 18, 2024: bioRxiv
https://read.qxmd.com/read/38659572/use-of-tetraethylammonium-tea-and-tris-loading-for-blocking-trpm7-channels-in-intact-cells
#12
JOURNAL ARTICLE
Katherine G Holderby, J Ashot Kozak
Tetraethylammonium (TEA), a quaternary ammonium compound, is a well-known blocker of potassium channels belonging to various subfamilies, such as KV 1-3, KCa 1, 2 and prokaryotic KcsA. In many cases, TEA acts from the extracellular side by open pore blockade. TEA can also block transient receptor potential (TRP) cation channels, such as TRPM7, in a voltage-dependent manner. In human T lymphocytes, intracellular (cytosolic) TEA and its analog TMA (tetramethylammonium) inhibit TRPM7 channel currents in the outward but not inward direction...
2024: Frontiers in Pharmacology
https://read.qxmd.com/read/38659380/roles-of-trp-and-piezo-receptors-in-autoimmune-diseases
#13
REVIEW
Baoqi Yang, Dan Ma, Xueqing Zhu, Zewen Wu, Qi An, Jingwen Zhao, Xinnan Gao, Liyun Zhang
Autoimmune diseases are pathological autoimmune reactions in the body caused by various factors, which can lead to tissue damage and organ dysfunction. They can be divided into organ-specific and systemic autoimmune diseases. These diseases usually involve various body systems, including the blood, muscles, bones, joints and soft tissues. The transient receptor potential (TRP) and PIEZO receptors, which resulted in David Julius and Ardem Patapoutian winning the Nobel Prize in Physiology or Medicine in 2021, attracted people's attention...
April 25, 2024: Expert Reviews in Molecular Medicine
https://read.qxmd.com/read/38657590/transient-receptor-potential-channels-in-sensory-mechanisms-of-the-lower-urinary-tract
#14
REVIEW
Ruiqiang Gou, Yuanyuan Liu, Li Gou, Shengyan Mi, Xiaonan Li, Yichen Yang, Xiaorong Cheng, Yibao Zhang
Urine storage and excretion require a network of interactions in the urinary tract and the central nervous system (CNS), which is mediated by a reservoir of water in the bladder and the outlet to the bladder neck, urethra and external urethral sphincter. Through communicating and coordinating each other, micturition system eventually showed a switch-like activity pattern. At cervicothoracic and lumbosacral spine, the spinal reflex pathway of the lower urinary tract (LUT) received mechanosensory input from the urothelium to regulate the bladder contraction activity, thereby controlled urination voluntarily...
April 24, 2024: Urologia Internationalis
https://read.qxmd.com/read/38656671/identification-of-age-related-characteristic-genes-involved-in-severe-covid-19-infection-among-elderly-patients-using-machine-learning-and-immune-cell-infiltration-analysis
#15
JOURNAL ARTICLE
Huan Li, Jin Zhao, Yan Xing, Jia Chen, Ziying Wen, Rui Ma, Fengxia Han, Boyong Huang, Hao Wang, Cui Li, Yang Chen, Xiaoxuan Ning
Elderly patients infected with severe acute respiratory syndrome coronavirus 2 are at higher risk of severe clinical manifestation, extended hospitalization, and increased mortality. Those patients are more likely to experience persistent symptoms and exacerbate the condition of basic diseases with long COVID-19 syndrome. However, the molecular mechanisms underlying severe COVID-19 in the elderly patients remain unclear. Our study aims to investigate the function of the interaction between disease-characteristic genes and immune cell infiltration in patients with severe COVID-19 infection...
April 24, 2024: Biochemical Genetics
https://read.qxmd.com/read/38645233/optimization-of-1-h-mr-spectroscopy-methods-for-large-volume-acquisition-of-low-concentration-downfield-resonances-at-3t-and-7t
#16
Neil E Wilson, Mark A Elliott, Ravi Prakash Reddy Nanga, Sophia Swago, Walter R Witschey, Ravinder Reddy
PURPOSE: This goal of this study was to optimize spectrally selective 1 H MRS methods for large volume acquisition of low concentration metabolites with downfield resonances at 7T and 3T, with particular attention paid to detection of nicotinamide adenine dinucleotide (NAD + ) and tryptophan. METHODS: Spectrally selective excitation was used to avoid magnetization transfer effects with water, and various sinc pulses were compared to a pure-phase E-BURP pulse. Localization using a single slice selective pulse was compared to voxel-based localization that used three orthogonal refocusing pulses, and low bandwidth refocusing pulses were used to take advantage of the chemical shift displacement of water...
April 12, 2024: medRxiv
https://read.qxmd.com/read/38642892/critical-amino-acid-residues-regulating-trpa1-zn-2-response-a-comparative-study-across-species
#17
JOURNAL ARTICLE
Masaki Matsubara, Yukiko Muraki, Hiroka Suzuki, Noriyuki Hatano, Katsuhiko Muraki
Cellular zinc ions (Zn2+ ) are crucial for signal transduction in various cell types. The transient receptor potential (TRP) ankyrin 1 (TRPA1) channel, known for its sensitivity to intracellular Zn2+ ([Zn2+ ]i ), has been a subject of limited understanding regarding its molecular mechanism. Here, we employed metal ion-affinity prediction, three-dimensional structural modeling, and mutagenesis, utilizing data from the Protein Data Bank and AlphaFold Database, to elucidate the [Zn2+ ]i binding domain (IZD) structure composed by specific amino acid residues (AAs) in human (hTRPA1) and chicken TRPA1 (gTRPA1)...
April 18, 2024: Journal of Biological Chemistry
https://read.qxmd.com/read/38641072/ligustilide-covalently-binds-to-cys703-in-the-pre-s1-helix-of-trpa1-blocking-the-opening-of-channel-and-relieving-pain-in-rats-with-acute-soft-tissue-injury
#18
JOURNAL ARTICLE
Kaixue Zhang, Wenjuan Liu, Fukui Shen, Guoqing Luan, Yanqi Han, Jun Xu, Cheng Fu, Weidong Wu, Yuanyuan Hou, Min Jiang, Tiejun Zhang, Gang Bai
ETHNOPHARMACOLOGICAL RELEVANCE: The natural anodyne Ligustilide (Lig), derived from Angelica sinensis (Oliv.) Diels and Ligusticum chuanxiong Hort., has been traditionally employed for its analgesic properties in the treatment of dysmenorrhea and migraine, and rheumatoid arthritis pain. Despite the existing reports on the correlation between TRP channels and the analgesic effects of Lig, a comprehensive understanding of their underlying mechanisms of action remains elusive. AIM OF THE STUDY: The objective of this study is to elucidate the mechanism of action of Lig on the analgesic target TRPA1 channel...
April 17, 2024: Journal of Ethnopharmacology
https://read.qxmd.com/read/38639558/time-series-analysis-of-rhenium-i-organometallic-covalent-binding-to-a-model-protein-for-drug-development
#19
JOURNAL ARTICLE
Francois J F Jacobs, John R Helliwell, Alice Brink
Metal-based complexes with their unique chemical properties, including multiple oxidation states, radio-nuclear capabilities and various coordination geometries yield value as potential pharmaceuticals. Understanding the interactions between metals and biological systems will prove key for site-specific coordination of new metal-based lead compounds. This study merges the concepts of target coordination with fragment-based drug methodologies, supported by varying the anomalous scattering of rhenium along with infrared spectroscopy, and has identified rhenium metal sites bound covalently with two amino acid types within the model protein...
May 1, 2024: IUCrJ
https://read.qxmd.com/read/38631680/canonical-transient-receptor-potential-channels-and-hypothalamic-control-of-homeostatic-functions
#20
REVIEW
Martin J Kelly, Edward J Wagner
Recent molecular biological and electrophysiological studies have identified multiple transient receptor potential (TRP) channels in hypothalamic neurons as critical modulators of homeostatic functions. In particular, the canonical transient receptor potential channels (TRPCs) are expressed in hypothalamic neurons that are vital for the control of fertility and energy homeostasis. Classical neurotransmitters such as serotonin and glutamate and peptide neurotransmitters such as kisspeptin, neurokinin B and pituitary adenylyl cyclase-activating polypeptide signal through their cognate G protein-coupled receptors to activate TPRC 4, 5 channels, which are essentially ligand-gated calcium channels...
April 17, 2024: Journal of Neuroendocrinology
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