keyword
https://read.qxmd.com/read/38717186/comprehensive-characterization-of-extracellular-vesicles-produced-by-environmental-neff-and-clinical-t4-strains-of-acanthamoeba-castellanii
#1
JOURNAL ARTICLE
Elisa Gonçalves Medeiros, Michele Ramos Valente, Leandro Honorato, Marina da Silva Ferreira, Susana Ruiz Mendoza, Diego de Souza Gonçalves, Lucas Martins Alcântara, Kamilla Xavier Gomes, Marcia Ribeiro Pinto, Ernesto S Nakayasu, Geremy Clair, Isadora Filipaki Munhoz da Rocha, Flavia C G Dos Reis, Marcio L Rodrigues, Lysangela R Alves, Leonardo Nimrichter, Arturo Casadevall, Allan Jefferson Guimarães
We conducted a comprehensive comparative analysis of extracellular vesicles (EVs) from two Acanthamoeba castellanii strains, Neff (environmental) and T4 (clinical). Morphological analysis via transmission electron microscopy revealed slightly larger Neff EVs (average = 194.5 nm) compared to more polydisperse T4 EVs (average = 168.4 nm). Nanoparticle tracking analysis (NTA) and dynamic light scattering validated these differences. Proteomic analysis of the EVs identified 1,352 proteins, with 1,107 common, 161 exclusive in Neff, and 84 exclusively in T4 EVs...
May 8, 2024: MSystems
https://read.qxmd.com/read/38715962/emerging-insights-into-cuproptosis-and-copper-metabolism-implications-for-age-related-diseases-and-potential-therapeutic-strategies
#2
REVIEW
Haohui Fan, Kun Wang, Xiaofang Zhao, Bei Song, Tianci Yao, Ting Liu, Guangyu Gao, Weilin Lu, Chengyun Liu
The expanding geriatric population, whose predisposition toward disabling morbidities and age-related diseases (ARD) is well-documented, has become a paramount social issue, exerting an onerous burden on both the healthcare industry and wider society. ARD manifest as the progressive deterioration of bodily tissues and organs, eventually resulting in the failure of these vital components. At present, no efficacious measures exist to hinder the onset of ARD. Copper, an essential trace element, is involved in a wide range of physiological processes across different cell types...
2024: Frontiers in Aging Neuroscience
https://read.qxmd.com/read/38710849/sustainable-microalgal-biomass-as-a-potential-functional-food-and-its-applications-in-food-industry-a-comprehensive-review
#3
REVIEW
Akhil Dhandwal, Omar Bashir, Tanu Malik, Rahul Vinayak Salve, Kshirod Kumar Dash, Tawheed Amin, Rafeeya Shams, Ab Waheed Wani, Yasir Abbas Shah
Microalgae (MA) are the most abundant seaweeds with high nutritional properties. They are accepted as potential biocatalysts for the bioremediation of wastewater. They are widely used in food, feed, and biofuel industries and can potentially be food for future generations. MA-based purification of wastewater technology could be a universal alternative solution for the recovery of resources from wastewater for low-cost biomass feedstock for industry. They provide a wide range of functional components, viz. omega-3 fatty acids, along with a plenteous number of pigments such as ß-carotene, astaxanthin, lutein, phycocyanin, and chlorophyll, which are used extensively as food additives and nutraceuticals...
May 7, 2024: Environmental Science and Pollution Research International
https://read.qxmd.com/read/38708855/exploring-lipid-protein-interactions-in-plant-membranes
#4
JOURNAL ARTICLE
Eliška Škrabálková, Přemysl Pejchar, Martin Potocký
Once regarded as mere membrane building blocks, lipids are now recognized as diverse and intricate players that mold the functions, identities, and responses of cellular membranes. Although the interactions of lipids with integral and peripheral membrane proteins are crucial for their localization, activity, and function, how proteins bind lipids is still far from being thoroughly explored. Describing and characterizing these dynamic protein-lipid interactions is thus essential to understanding the membrane-associated processes...
May 6, 2024: Journal of Experimental Botany
https://read.qxmd.com/read/38702007/macromolecules-with-predominant-%C3%AE-pleated-sheet-proteins-in-extracellular-vesicles-released-from-raphanus-sativus-l-var-caudatus-alef-microgreens-induce-dna-damage-mediated-apoptosis-in-hct116-colon-cancer-cells
#5
JOURNAL ARTICLE
Karnchanok Kaimuangpak, Reny Rosalina, Kanjana Thumanu, Natthida Weerapreeyakul
Plant-derived bioactive macromolecules (i.e., proteins, lipids, and nucleic acids) were prepared as extracellular vesicles (EVs). Plant-derived EVs are gaining pharmaceutical research interest because of their bioactive components and delivery properties. The spherical nanosized EVs derived from Raphanus sativus L. var. caudatus Alef microgreens previously showed antiproliferative activity in HCT116 colon cancer cells from macromolecular compositions (predominantly proteins). To understand the mechanism of action, the biological activity studies, i...
May 1, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38698666/early-life-nutrition-is-associated-with-processing-speed-at-age-5-in-children-born-preterm-with-very-low-birth-weight
#6
JOURNAL ARTICLE
Nicole Bando, Julie Sato, Margot J Taylor, Christopher Tomlinson, Sharon Unger, Michelle R Asbury, Nicole Law, Deborah L O'Connor
OBJECTIVE: Processing speed is suboptimal among preterm-born children which is of concern as it is a foundational skill supporting higher-level cognitive functions. The study objective was to evaluate associations between early-life nutrition and processing speed in childhood. METHODS: Macronutrient and human milk (mother's own, donor) intakes from 137 children born preterm with very low birth weight enrolled in a nutrition feeding trial were included. Processing speed was evaluated at age 5 using the WPPSI-IV Processing Speed Index...
May 2, 2024: Journal of Pediatric Gastroenterology and Nutrition
https://read.qxmd.com/read/38697544/biomolecular-budget-of-persistent-microbial-derived-soil-organic-carbon-the-importance-of-underexplored-pools
#7
JOURNAL ARTICLE
Kaitlin R Rempfert, Sheryl L Bell, Christopher P Kasanke, Qian Zhao, Xiaodong Zhao, Andrew S Lipton, Kirsten S Hofmockel
The details of how soil microorganisms contribute to stable soil organic carbon pools are a pressing knowledge gap with direct implications for soil health and climate mitigation. It is now recognized that microbial necromass contributes substantially to the formation of stable soil carbon. However, the quantification of necromass in soils has largely been limited to model molecules such as aminosugar biomarkers. The abundance and chemical composition of other persistent microbial residues remain unresolved, particularly concerning how these pools may vary with microbial community structure, soil texture, and management practices...
April 30, 2024: Science of the Total Environment
https://read.qxmd.com/read/38696337/a-versatile-delivery-vehicle-for-cellular-oxygen-and-fuels-or-metabolic-sensor-a-review-and-perspective-on-the-functions-of-myoglobin
#8
REVIEW
Kiran Kumar Adepu, Andriy Anishkin, Sean H Adams, Sree V Chintapalli
A canonical view of the primary physiological function of myoglobin (Mb) is that it is an oxygen (O2 ) storage protein supporting mitochondrial oxidative phosphorylation, especially as the tissue O2 partial pressure ( p O2 ) drops and Mb offloads O2 . Besides O2 storage/transport, recent findings support functions for Mb in lipid trafficking and sequestration, interacting with cellular glycolytic metabolites such as lactate (LAC) and pyruvate (PYR) , and "ectopic" expression in some types of cancer cells and in brown adipose tissue (BAT)...
May 2, 2024: Physiological Reviews
https://read.qxmd.com/read/38693223/exosomes-as-mediators-of-signal-transmitters-in-biotoxins-toxicity-a-comprehensive-review
#9
REVIEW
Tongxiao Xu, Bingxin Huangfu, Xiaoyun He, Kunlun Huang
Small membranes known as exosomes surround them and are released by several cell types both in vitro and in vivo. These membranes are packed with a variety of biomolecules, including proteins, lipids, deoxyribonucleic acid (DNA), ribonucleic acid (RNA), and non-coding RNA (ncRNA). As a source of biological nanomaterials, exosomes play a role in information and substance transmission between cells and have been identified as a general method of facilitating communication during interactions between the body, target organs, and toxins...
May 2, 2024: Cell Biology and Toxicology
https://read.qxmd.com/read/38691101/protein-interface-regulating-the-inserting-process-of-imidazole-ionic-liquids-into-the-cell-membrane
#10
JOURNAL ARTICLE
Ju Liu, Jing Ren, Simin Li, Hongyan He, Yanlei Wang
Ionic liquids (ILs) have shown promising potential in membrane protein extraction; however, the underlying mechanism remains unclear. Herein, we employed GPU-accelerated molecular dynamics (MD) simulations to investigate the dynamic insertion process of ILs into cell membranes containing membrane proteins. Our findings reveal that ILs spontaneously insert into the membrane, and the presence of membrane proteins significantly decelerates the rate of IL insertion into the membrane. Specifically, the relationship between the insertion rate and inserting free energy exhibits non-monotonic changes, which can be attributed to interfacial effects...
May 1, 2024: Journal of Physical Chemistry. B
https://read.qxmd.com/read/38681450/evaluating-the-impact-of-the-covid-19-pandemic-on-first-year-medical-student-nutrition
#11
JOURNAL ARTICLE
Chase Yuan, Priya Nair, Christine Jacob, Natalia Lowry
BACKGROUND: Medical school students in high-stress environments have been shown to make poor personal health decisions ranging from less healthy selections of food to lower rates of exercise. With the emergence of the COVID-19 pandemic adding a major social and health challenge, it is important to examine the effect this new stressor has on the health habits of medical school students. METHODS: All first-year students at Albany Medical College completed a self-recorded three-day log of food intake and exercise modality and duration...
March 2024: Curēus
https://read.qxmd.com/read/38680889/exosomes-from-uterine-fluid-promote-capacitation-of-human-sperm
#12
JOURNAL ARTICLE
Renbin Deng, Zhao Wu, Chaoyong He, Chuncheng Lu, Danpeng He, Xi Li, Zhenling Duan, Hui Zhao
BACKGROUND: Extracellular vesicles (EVs) are membrane-bound vesicles containing various proteins, lipids, and nucleic acids. EVs are found in many body fluids, such as blood and urine. The release of EVs can facilitate intercellular communication through fusion with the plasma membrane or endocytosis into the recipient cell or through internalization of the contents. Recent studies have reported that EVs isolated from human endometrial epithelial cells (EECs) promote sperm fertilization ability...
2024: PeerJ
https://read.qxmd.com/read/38680136/physicochemical-properties-and-fatty-acid-profile-of-oil-extracted-from-black-soldier-fly-larvae-hermetia-illucens
#13
JOURNAL ARTICLE
Krittika Srisuksai, Paviga Limudomporn, Uthaiwan Kovitvadhi, Khunakon Thongsuwan, Witcha Imaram, Ratchaphon Lertchaiyongphanit, Tharinee Sareepoch, Attawit Kovitvadhi, Wirasak Fungfuang
BACKGROUND AND AIM: Hermetia illucens , a black soldier fly, is widely recognized for sustainable recycling of organic waste. Black soldier fly larvae (BSFLs) can consume various types of biowastes and convert them into nutrient-rich biomass, including proteins, lipids, chitin, and minerals. This study investigated the best extraction method by comparing the fatty acid profiles, percentage yield, and antioxidant properties of BSFL oil extracted using different extraction methods. MATERIALS AND METHODS: The physicochemical properties, fatty acid profile, and free radical scavenging ability of BSFL oil were analyzed using six extraction methods...
March 2024: Veterinary World
https://read.qxmd.com/read/38675228/unveiling-the-potential-of-extracellular-vesicles-as-biomarkers-and-therapeutic-nanotools-for-gastrointestinal-diseases
#14
REVIEW
Valentina Arrè, Rita Mastrogiacomo, Francesco Balestra, Grazia Serino, Federica Viti, Federica Rizzi, Maria Lucia Curri, Gianluigi Giannelli, Nicoletta Depalo, Maria Principia Scavo
Extracellular vesicles (EVs), acting as inherent nanocarriers adept at transporting a range of different biological molecules such as proteins, lipids, and genetic material, exhibit diverse functions within the gastroenteric tract. In states of normal health, they participate in the upkeep of systemic and organ homeostasis. Conversely, in pathological conditions, they significantly contribute to the pathogenesis of gastrointestinal diseases (GIDs). Isolating EVs from patients' biofluids facilitates the discovery of new biomarkers that have the potential to offer a rapid, cost-effective, and non-invasive method for diagnosing and prognosing specific GIDs...
April 21, 2024: Pharmaceutics
https://read.qxmd.com/read/38674414/effects-of-fat-and-carnitine-on-the-expression-of-carnitine-acetyltransferase-and-enoyl-coa-hydratase-short-chain-1-in-the-liver-of-juvenile-gift-oreochromis-niloticus
#15
JOURNAL ARTICLE
Ruijie Guo, Kai Huang, Kai Yu, Jinghua Li, Jiao Huang, Dandan Wang, Yuda Li
Carnitine acetyltransferase (CAT) and Enoyl-CoA hydratase short-chain 1 (ECHS1) are considered key enzymes that regulate the β-oxidation of fatty acids. However, very few studies have investigated their full length and expression in genetically improved farmed tilapia (GIFT, Oreochromis niloticus ), an important aquaculture species in China. Here, we cloned CAT and ECHS1 full-length cDNA via the rapid amplification of cDNA ends, and the expressions of CAT and ECHS1 in the liver of juvenile GIFT were detected in different fat and carnitine diets, as were the changes in the lipometabolic enzymes and serum biochemical indexes of juvenile GIFT in diets with different fat and carnitine levels...
April 10, 2024: Genes
https://read.qxmd.com/read/38670324/assessing-the-martini-3-protein-model-a-review-of-its-path-and-potential
#16
REVIEW
Luís Borges-Araújo, Gilberto P Pereira, Mariana Valério, Paulo C T Souza
Coarse-grained (CG) protein models have become indispensable tools for studying many biological protein details, from conformational dynamics to the organization of protein macro-complexes, and even the interaction of proteins with other molecules. The Martini force field is one of the most widely used CG models for bio-molecular simulations, partly because of the enormous success of its protein model. With the recent release of a new and improved version of the Martini force field - Martini 3 - a new iteration of its protein model was also made available...
April 24, 2024: Biochimica et Biophysica Acta. Proteins and Proteomics
https://read.qxmd.com/read/38667415/-bombus-terrestris-prefer-mixed-pollen-diets-for-a-better-colony-performance-a-laboratory-study
#17
JOURNAL ARTICLE
Ziyu Zhou, Hong Zhang, Shibonage K Mashilingi, Chunting Jie, Baodi Guo, Yi Guo, Xiao Hu, Shahid Iqbal, Bingshuai Wei, Yanjie Liu, Jiandong An
Pollen is a major source of proteins and lipids for bumblebees. The nutritional content of pollen may differ from source plants, ultimately affecting colony development. This study investigated the foraging preferences of Bombus terrestris in regard to four pollen species, i.e., oilseed rape, wild apricot, sunflower, and buckwheat, under laboratory conditions. The results show that B . terrestris diversified their preference for pollens; the bumblebees mostly preferred wild apricot pollen, whereas sunflower pollen was the least preferred...
April 17, 2024: Insects
https://read.qxmd.com/read/38659925/dynamic-formation-of-the-protein-lipid-pre-fusion-state
#18
Maria Bykhovskaia
Synaptic vesicles (SVs) release neuronal transmitters by the fusion with the presynaptic membrane (PM), and the SV protein Synaptotagmin 1 (Syt1) serves as a Ca 2+ sensor for evoked fusion. Syt1 is thought to trigger fusion by penetrating into PM upon Ca 2+ binding, however the mechanistic detail of this process are still debated. Syt1 interacts with the SNARE complex, a coiled-coil four-helical bundle that mediates the SV-PM attachment, and the protein Complexin (Cpx) attaches to the SNARE bundle and promotes Ca 2+ -dependent fusion...
April 20, 2024: bioRxiv
https://read.qxmd.com/read/38659457/algae-as-an-alternative-source-of-protein-in-poultry-diets-for-sustainable-production-and-disease-resistance-present-status-and-future-considerations
#19
REVIEW
Ahmed A A Abdel-Wareth, Ayanna Nate Williams, Md Salahuddin, Sachin Gadekar, Jayant Lohakare
Integrating algae into poultry diets offers a promising avenue for enhancing nutrition, boosting sustainability efforts, and potentially stimulating disease resistance. This comprehensive review delves into the essence, diversity, chemical composition, and nutritional merits of algae, spotlighting their emergence as innovative nutrient sources and health supplements for poultry. The growing interest in algae within poultry nutrition stems from their diverse nutritional profile, boasting a rich array of proteins, lipids, amino acids, vitamins, minerals, and antioxidants, thus positioning them as valuable feed constituents...
2024: Frontiers in Veterinary Science
https://read.qxmd.com/read/38659173/structural-studies-of-a-serum-amyloid-a-octamer-that-is-primed-to-scaffold-lipid-nanodiscs
#20
JOURNAL ARTICLE
Asal Nady, Sean E Reichheld, Simon Sharpe
Serum amyloid A (SAA) is a highly conserved acute-phase protein that plays roles in activating multiple pro-inflammatory pathways during the acute inflammatory response and is commonly used as a biomarker of inflammation. It has been linked to beneficial roles in tissue repair through improved clearance of lipids and cholesterol from sites of damage. In patients with chronic inflammatory diseases, elevated levels of SAA may contribute to increased severity of the underlying condition. The majority of circulating SAA is bound to lipoproteins, primarily high-density lipoprotein (HDL)...
May 2024: Protein Science
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