keyword
https://read.qxmd.com/read/38647076/admetsar3-0-a-comprehensive-platform-for-exploration-prediction-and-optimization-of-chemical-admet-properties
#1
JOURNAL ARTICLE
Yaxin Gu, Zhuohang Yu, Yimeng Wang, Long Chen, Chaofeng Lou, Chen Yang, Weihua Li, Guixia Liu, Yun Tang
Absorption, distribution, metabolism, excretion and toxicity (ADMET) properties play a crucial role in drug discovery and chemical safety assessment. Built on the achievements of admetSAR and its successor, admetSAR2.0, this paper introduced the new version of the series, admetSAR3.0, as a comprehensive platform for chemical ADMET assessment, including search, prediction and optimization modules. In the search module, admetSAR3.0 hosted over 370 000 high-quality experimental ADMET data for 104 652 unique compounds, and supplemented chemical structure similarity search function to facilitate read-across...
April 22, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38645644/full-spectrum-cannabidiol-rich-extract-reduced-propofol-dosage-required-for-anesthetic-induction-in-dogs-a-pilot-study
#2
JOURNAL ARTICLE
João Lourenço Hasckel Gewehr, Maria Laura Enzele, Lucas Marlon Freiria, Morgana Martins Nunes, Júlia Spengler, Ana Paula Dondoerfer Teixeira, Erik Amazonas, Vanessa Sasso Padilha
INTRODUCTION: Cannabinoids show great therapeutic potential, but their effect on anesthesia still remains unclear. Use of chronic recreational Cannabis in humans undergoing anesthetic procedures tends to require a higher dose when compared to non-users. On the other hand, studies on rodents and dogs have shown that cannabinoid agonists may potentiate certain anesthetics. This contrast of effects possibly occurs due to different time lengths of administration of different phytocannabinoids at different doses, and their distinct effects on the Endocannabinoid System, which is also affected by anesthetics such as propofol and isoflurane...
2024: Frontiers in Veterinary Science
https://read.qxmd.com/read/38636673/development-of-a-pharmaceutical-database-as-an-aid-to-the-nonclinical-detection-of-drug-induced-cardiac-toxicity
#3
JOURNAL ARTICLE
Donald De Alwis, C Michael Foley, Eugene Herman, Adam P Hill, Peter K Hoffmann, Yasunari Kanda, Emily Kaushik, Jennifer Pierson, Raechel Puglisi, Hong Shi, Xi Yang, Michael K Pugsley
The Health and Environmental Sciences Institute (HESI) Cardiac Safety Committee designed and created a publicly accessible database with an initial set of 128 pharmacologically defined pharmaceutical agents, many with known cardiotoxic properties. The database includes specific information about each compound that could be useful in evaluating hypotheses around mechanisms of drug-induced cardiac toxicity or for development of novel cardiovascular safety assays. Data on each of the compounds was obtained from published literature and online sources (e...
April 16, 2024: Journal of Pharmacological and Toxicological Methods
https://read.qxmd.com/read/38631737/multiple-adverse-outcomes-associated-with-antipsychotic-use-in-people-with-dementia-population-based-matched-cohort-study
#4
JOURNAL ARTICLE
Pearl L H Mok, Matthew J Carr, Bruce Guthrie, Daniel R Morales, Aziz Sheikh, Rachel A Elliott, Elizabeth M Camacho, Tjeerd van Staa, Anthony J Avery, Darren M Ashcroft
OBJECTIVE: To investigate risks of multiple adverse outcomes associated with use of antipsychotics in people with dementia. DESIGN: Population based matched cohort study. SETTING: Linked primary care, hospital and mortality data from Clinical Practice Research Datalink (CPRD), England. POPULATION: Adults (≥50 years) with a diagnosis of dementia between 1 January 1998 and 31 May 2018 (n=173 910, 63.0% women)...
April 17, 2024: BMJ: British Medical Journal
https://read.qxmd.com/read/38623483/on-time-denosumab-dosing-recovered-rapidly-during-the-covid-19-pandemic-yet-remains-suboptimal
#5
JOURNAL ARTICLE
Anna M Rzepka, Angela M Cheung, Sandra Kim, Tara Gomes, Suzanne M Cadarette
Timely administration of denosumab every 6 mo is critical in osteoporosis treatment to avoid multiple vertebral fracture risk upon denosumab discontinuation or delay. This study aimed to estimate the immediate and prolonged impact of the COVID-19 pandemic on the timing of denosumab doses. We identified older adults (≥66 yr) residing in the community who were due to receive denosumab between January 2016 and December 2020 using Ontario Drug Benefit data. We completed an interrupted time-series analysis to estimate the impact of the COVID-19 pandemic (March 2020) on the monthly proportion of on-time denosumab doses (183 +/-30 d)...
May 2024: JBMR Plus
https://read.qxmd.com/read/38606289/benchmarking-antibody-clustering-methods-using-sequence-structural-and-machine-learning-similarity-measures-for-antibody-discovery-applications
#6
JOURNAL ARTICLE
Dawid Chomicz, Jarosław Kończak, Sonia Wróbel, Tadeusz Satława, Paweł Dudzic, Bartosz Janusz, Mateusz Tarkowski, Piotr Deszyński, Tomasz Gawłowski, Anna Kostyn, Marek Orłowski, Tomasz Klaus, Lukas Schulte, Kyle Martin, Stephen R Comeau, Konrad Krawczyk
Antibodies are proteins produced by our immune system that have been harnessed as biotherapeutics. The discovery of antibody-based therapeutics relies on analyzing large volumes of diverse sequences coming from phage display or animal immunizations. Identification of suitable therapeutic candidates is achieved by grouping the sequences by their similarity and subsequent selection of a diverse set of antibodies for further tests. Such groupings are typically created using sequence-similarity measures alone. Maximizing diversity in selected candidates is crucial to reducing the number of tests of molecules with near-identical properties...
2024: Frontiers in Molecular Biosciences
https://read.qxmd.com/read/38600599/improving-medication-prescribing-related-outcomes-for-vulnerable-elderly-in-transitions-on-high-risk-medications-improve-it-hrm-a-pilot-randomized-trial-protocol
#7
JOURNAL ARTICLE
Anne Holbrook, Dan Perri, Mitch Levine, Lawrence Mbuagbaw, Sarah Jarmain, Lehana Thabane, Jean-Eric Tarride, Lisa Dolovich, Sylvia Hyland, Victoria Telford, Jessyca Silva, Carmine Nieuwstraten
BACKGROUND: Seniors with recurrent hospitalizations who are taking multiple medications including high-risk medications are at particular risk for serious adverse medication events. We will assess whether an expert Clinical Pharmacology and Toxicology (CPT) medication management intervention during hospitalization with follow-up post-discharge and communication with circle of care is feasible and can decrease drug therapy problems amongst this group. METHODS: The design is a pragmatic pilot randomized trial with 1:1 patient-level concealed randomization with blinded outcome assessment and data analysis...
April 10, 2024: Pilot and Feasibility Studies
https://read.qxmd.com/read/38596315/cat-e-a-comprehensive-web-tool-for-exploring-cancer-targeting-strategies
#8
JOURNAL ARTICLE
Rana Salihoglu, Johannes Balkenhol, Gudrun Dandekar, Chunguang Liang, Thomas Dandekar, Elena Bencurova
Identifying potential cancer-associated genes and drug targets from omics data is challenging due to its diverse sources and analyses, requiring advanced skills and large amounts of time. To facilitate such analysis, we developed Cat-E ( Ca ncer T arget E xplorer), a novel R/Shiny web tool designed for comprehensive analysis with evaluation according to cancer-related omics data. Cat-E is accessible at https://cat-e.bioinfo-wuerz.eu/. Cat-E compiles information on oncolytic viruses, cell lines, gene markers, and clinical studies by integrating molecular datasets from key databases such as OvirusTB, TCGA, DrugBANK, and PubChem...
December 2024: Computational and Structural Biotechnology Journal
https://read.qxmd.com/read/38595824/association-between-prolactin-increasing-antipsychotic-use-and-the-risk-of-breast-cancer-a-retrospective-observational-cohort-study-in-a-united-states-medicaid-population
#9
JOURNAL ARTICLE
David M Kern, Azza Shoaibi, David Shearer, Ute Richarz, Leslie Killion, R Karl Knight
INTRODUCTION: Results of retrospective studies examining the relationship between prolactin increasing antipsychotics and incident breast cancer have been inconsistent. This study assessed the association between use of high prolactin increasing antipsychotics (HPD) and the incidence of breast cancer using best practices in pharmacoepidemiology. METHODS: Using administrative claims data from the MarketScan Medicaid database, schizophrenia patients initiating antipsychotics were identified...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38589405/machine-learning-accelerates-pharmacophore-based-virtual-screening-of-mao-inhibitors
#10
JOURNAL ARTICLE
Marcin Cieślak, Tomasz Danel, Olga Krzysztyńska-Kuleta, Justyna Kalinowska-Tłuścik
Nowadays, an efficient and robust virtual screening procedure is crucial in the drug discovery process, especially when performed on large and chemically diverse databases. Virtual screening methods, like molecular docking and classic QSAR models, are limited in their ability to handle vast numbers of compounds and to learn from scarce data, respectively. In this study, we introduce a universal methodology that uses a machine learning-based approach to predict docking scores without the need for time-consuming molecular docking procedures...
April 8, 2024: Scientific Reports
https://read.qxmd.com/read/38574810/hepatic-artery-aneurysms-in-infective-endocarditis-report-of-10-cases-and-literature-review
#11
JOURNAL ARTICLE
Monique Boukobza, Emila Ilic-Habensus, Florent Arregle, Gilbert Habib, Xavier Duval, Jean-Pierre Laissy
BACKGROUND: Hepatic artery aneurysms (HAAs), albeit rare in infective endocarditis (IE), are associated with a life-threatening morbidity. METHODS: Retrospective review of 10 HAA-IE-patients based on a total of 623 IE-patients managed in two institutions (2008-2020) vs 35 literature' cases. RESULTS: In our patient population, HAAs (10 males, mean-age 48) were incidentally found during IE-workup. All were asymptomatic. IE involved mitral (n=6), aortic (n=3), or mitral-aortic valve (n=1)...
April 2, 2024: Annals of Vascular Surgery
https://read.qxmd.com/read/38572526/decreased-risk-of-renal-cell-carcinoma-in-patients-with-type-2-diabetes-treated-with-sodium-glucose-cotransporter-2-inhibitors
#12
JOURNAL ARTICLE
Chun-Huei Chiu, Wei-Yao Wang, Hung-Yi Chen, Pei-Lun Liao, Gwo-Ping Jong, Tsung-Yuan Yang
Patients with type 2 diabetes (T2D) are at a higher risk of developing renal cell carcinoma (RCC) than the general population. In vitro and in vivo investigations of the effects of sodium glucose cotransporter-2 inhibitors (SGLT2I) have shown a significantly reduced risk of RCC. However, the impact of these drugs on the incidence of RCC in the human population is unclear. This study aimed to examine the association between SGLT2I use and RCC risk in patients with T2D. We undertook a nationwide retrospective cohort study using the Health and Welfare Data Science Center database (2016-2020)...
April 4, 2024: Cancer Science
https://read.qxmd.com/read/38564306/ibdtransdb-a-manually-curated-transcriptomic-database-for-inflammatory-bowel-disease
#13
JOURNAL ARTICLE
Victor Avram, Shweta Yadav, Pranav Sahasrabudhe, Dan Chang, Jing Wang
Inflammatory Bowel Disease (IBD) therapies are ineffective in at least 40% patients, and transcriptomic datasets have been widely used to reveal the pathogenesis and to identify the novel drug targets for these patients. Although public IBD transcriptomic datasets are available from many web-based tools/databases, due to the unstructured metadata and data description of these public datasets, most of these tools/databases do not allow querying datasets based on multiple keywords (e.g. colon and infliximab)...
March 28, 2024: Database: the Journal of Biological Databases and Curation
https://read.qxmd.com/read/38562513/a-rare-case-of-necrotizing-fasciitis-of-the-leg-in-an-intravenous-drug-user-caused-by-prevotella-denticola
#14
Andrea Bedini, Filippo Medioli, Altea Gallerani, Irene Venturelli, Giacomo Franceschi, Marianna Meschiari, Erica Franceschini, Giacomo Maria Lima, Mario Sarti, Cristina Mussini
BACKGROUND: Intravenous drug users (IDUs) have a high risk of developing skin and soft tissue infections such as erysipelas, abscesses, and less frequently necrotizing fasciitis (NF) or gas gangrene. Rarely, the cause of the infection is microorganisms residing in the oral cavity and can lead to life-threatening infections. METHODS: We describe the case of a 43-year-old man intravenous drug user (IDU) who was admitted for intense leg pain following an injection of cocaine at that site...
2024: Journal of Oral Microbiology
https://read.qxmd.com/read/38557634/pronet-db-a-proteome-wise-database-for-protein-surface-property-representations-and-rna-binding-profiles
#15
JOURNAL ARTICLE
Junkang Wei, Jin Xiao, Siyuan Chen, Licheng Zong, Xin Gao, Yu Li
The rapid growth in the number of experimental and predicted protein structures and more complicated protein structures poses a significant challenge for computational biology in leveraging structural information and accurate representation of protein surface properties. Recently, AlphaFold2 released the comprehensive proteomes of various species, and protein surface property representation plays a crucial role in protein-molecule interaction predictions, including those involving proteins, nucleic acids and compounds...
April 1, 2024: Database: the Journal of Biological Databases and Curation
https://read.qxmd.com/read/38553153/leveraging-code-free-deep-learning-for-pill-recognition-in-clinical-settings-a-multicenter-real-world-study-of-performance-across-multiple-platforms
#16
MULTICENTER STUDY
Amir Reza Ashraf, Anna Somogyi-Végh, Sára Merczel, Nóra Gyimesi, András Fittler
BACKGROUND: Preventable patient harm, particularly medication errors, represent significant challenges in healthcare settings. Dispensing the wrong medication is often associated with mix-up of lookalike and soundalike drugs in high workload environments. Replacing manual dispensing with automated unit dose and medication dispensing systems to reduce medication errors is not always feasible in clinical facilities experiencing high patient turn-around or frequent dose changes. Artificial intelligence (AI) based pill recognition tools and smartphone applications could potentially aid healthcare workers in identifying pills in situations where more advanced dispensing systems are not implemented...
April 2024: Artificial Intelligence in Medicine
https://read.qxmd.com/read/38544304/individual-differences-in-substance-use-motives-trauma-and-stress-among-college-based-polysubstance-users
#17
JOURNAL ARTICLE
N Jaume-Feliciosi, C E Benca-Bachman, E Holliday, R H Palmer
Background : Co-use of alcohol and other drugs within a certain time frame (i.e., polysubstance use) has become increasingly prevalent, particularly among college-aged individuals, but understanding motives for co-use remains limited. Polysubstance use has been associated with a higher likelihood of negative health consequences as compared to single substance use. Objectives : The current study examined associations between motivations for using alcohol, tobacco, and cannabis among college students who use multiple substances versus students using only one substance or no substances...
March 27, 2024: Substance Use & Misuse
https://read.qxmd.com/read/38540624/medication-seeking-behaviors-and-correlated-characteristics-of-zolpidem-users-in-taiwan-a-shared-patient-network-analysis
#18
JOURNAL ARTICLE
Yi-Ju Pan, Sheng-Hsuan Chang, Wei-Chen Lee, Yu-Chun Chen
Increasing insomnia signals a public health problem, alongside rising zolpidem use. This study investigates the factors behind the disproportionate rise in zolpidem prescriptions in Taiwan. It aims to identify the determinants of high-dose zolpidem users in Taiwan's Yilan County and employ an innovative approach to outline their medication-seeking patterns, using Taiwan's healthcare database. The associations between sociodemographic and clinical factors and low-dose and high-dose users were analyzed using multiple logistic regression...
March 14, 2024: Healthcare (Basel, Switzerland)
https://read.qxmd.com/read/38538449/assessment-of-education-in-a-community-hospital-on-healthcare-providers-knowledge-of-and-attitudes-toward-medical-marijuana
#19
JOURNAL ARTICLE
Sierra Meyers, Kisha Gant, Melissa Burmeister
INTRODUCTION: Although medical marijuana usage continues to become more socially acceptable and is increasingly regarded as a legitimate treatment alternative for certain medical conditions such as cancer and epilepsy, stigma remains. METHODS: This study examined whether offering an educational session addressing several key aspects of medical marijuana (e.g., pharmacology, legality) to healthcare providers in a community hospital setting improved knowledge about and/or altered attitudes toward marijuana use...
March 26, 2024: Currents in Pharmacy Teaching & Learning
https://read.qxmd.com/read/38532070/generating-human-bone-marrow-organoids-for-disease-modeling-and-drug-discovery
#20
REVIEW
Aude-Anais Olijnik, Antonio Rodriguez-Romera, Zoë C Wong, Yuqi Shen, Jasmeet S Reyat, Natalie J Jooss, Julie Rayes, Bethan Psaila, Abdullah O Khan
The bone marrow supports and regulates hematopoiesis, responding to physiological requirements for blood cell production over ontogeny and during pathological challenges. Interactions between hematopoietic cells and niche components are challenging to study mechanistically in the human context, but are important to delineate in order to explore the pathobiology of blood and bone marrow disorders. Organoids are proving transformative in many research settings, but an accurate human bone marrow model incorporating multiple hematopoietic and stromal elements has been lacking...
March 26, 2024: Nature Protocols
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