keyword
https://read.qxmd.com/read/35641454/cell-in-catalytic-shell-nanoarchitectonics-catalytic-empowerment-of-individual-living-cells-by-single-cell-nanoencapsulation
#21
JOURNAL ARTICLE
Hojae Lee, Joohyouck Park, Nayoung Kim, Wongu Youn, Gyeongwon Yun, Sang Yeong Han, Duc Tai Nguyen, Insung S Choi
Cell-in-shell biohybrid structures, synthesized by encapsulating individual living cells with exogenous materials, have emerged as exciting functional entities for engineered living materials, with emergent properties outside the scope of biochemical modifications. Artificial exoskeletons have, up to date, provided physicochemical shelters to the cells inside in the first stage of technological development, and further advances in the field demand catalytically empowered, cellular hybrid systems that augment the biological functions of cells and even introduce completely new functions to the cells...
May 31, 2022: Advanced Materials
https://read.qxmd.com/read/34746608/three-steps-two-enzymes-one-pot-but-a-multitude-of-nanocompartments-combined-cycles-of-kinetic-resolutions-and-re-racemization-with-incompatible-biocatalysts
#22
JOURNAL ARTICLE
Florian Golombek, Marco Haumann, Matthias S G Knoll, Andreas Paul Fröba, Kathrin Castiglione
Deracemizations are clearly preferable to kinetic resolutions in the production of chiral molecules from racemates, as they allow up to 100% chemical and optical yield. Here we present a new process route for multienzymatic deracemizations that is relevant for reaction systems with incompatible reaction conditions of the biocatalysts. This often applies to combinations of lipases used for stereoselective acylation and solvent-sensitive racemases. By encapsulating a model racemase in polymeric vesicles, it was protected from inactivation by the organic solvent up to phase proportions of 99%...
November 2, 2021: ACS Omega
https://read.qxmd.com/read/34220333/biocatalytic-access-to-betazole-using-a-one-pot-multienzymatic-system-in-continuous-flow
#23
JOURNAL ARTICLE
Maria Romero-Fernandez, Francesca Paradisi
As an alternative to classical synthetic approaches for the production of betazole drug, a one-pot biocatalytic system for this pharmaceutical molecule from its alcohol precursor has been developed. An ω-transaminase, an alcohol dehydrogenase and a water-forming NADH oxidase for in situ cofactor recycling have been combined to catalyse this reaction, yielding 75% molar conversion in batch reactions with soluble enzymes. This multienzyme system was then co-immobilised through a newly established protocol for sequential functionalization of a methacrylate-based porous carrier to enable tailored immobilisation chemistries for each enzyme...
May 24, 2021: Green Chemistry: An International Journal and Green Chemistry Resource: GC
https://read.qxmd.com/read/33710182/fluorescent-assay-for-quantitative-analysis-of-trimethylamine-n-oxide
#24
JOURNAL ARTICLE
Wen Zhang, Jiao Sun, Fang Wang, Jiang Liu, Ying Han, Miao Jiang, Dongqi Tang
Trimethylamine N-oxide (TMAO), a gut microbial metabolite involved in cardiovascular and kidney diseases, has great potential as a biomarker, thus making TMAO quantification of great significance. The current assay methods are mainly established on mass spectrometry. However, the classic enzymatic approach is absent, which may be because there is no appropriate single-enzyme reaction. Here, we prepared TMAO demethylase and formaldehyde dehydrogenase and found that these two bacterial enzymes catalyze an efficient coupled reaction that produces NADH from TMAO conversion...
March 12, 2021: Analytical Methods: Advancing Methods and Applications
https://read.qxmd.com/read/33564922/research-progress-and-the-biotechnological-applications-of-multienzyme-complex
#25
REVIEW
Yi Jiang, Xinyi Zhang, Haibo Yuan, Di Huang, Ruiming Wang, Hongling Liu, Tengfei Wang
The multienzyme complex system has become a research focus in synthetic biology due to its highly efficient overall catalytic ability and has been applied to various fields. Multienzyme complexes are formed by cascading complexes, which are multiple functionally related enzymes that continuously and efficiently catalyze the production of substrates. Compared with current mainstream microbial cell catalytic systems, in vitro multienzyme molecular machines have many advantages, such as fewer side reactions, a high product yield, a fast reaction speed, easy product separation, a tolerable toxic environment, and robust system operability, showing increasing competitiveness in the field of biomanufacturing...
February 10, 2021: Applied Microbiology and Biotechnology
https://read.qxmd.com/read/33376922/constructive-optimization-of-a-multienzymatic-film-based-on-a-cascade-reaction-for-electrochemical-biosensors
#26
JOURNAL ARTICLE
Kai Sasaki, Hiroyuki Furusawa, Kuniaki Nagamine, Shizuo Tokito
The application of a multienzyme cascade reaction in electrochemical biosensors has the advantage of expanding the target substrates in addition to selectivity combining multiple enzymes on an electrode. However, the multienzyme system has the drawback of inefficient substance conversion because of the time-consuming passing of intermediates between the enzymes and/or diffusional loss of the intermediates. In this study, the optimal construction of a multienzymatic film in an ammonia detection sensor was investigated using a cascade reaction of l-glutamate oxidase and l-glutamate dehydrogenase as a model sensor...
December 22, 2020: ACS Omega
https://read.qxmd.com/read/32490190/a-biological-nanomachine-at-work-watching-the-cellulosome-degrade-crystalline-cellulose
#27
JOURNAL ARTICLE
Manuel Eibinger, Thomas Ganner, Harald Plank, Bernd Nidetzky
The cellulosome is a supramolecular multienzymatic protein complex that functions as a biological nanomachine of cellulosic biomass degradation. How the megadalton-size cellulosome adapts to a solid substrate is central to its mechanism of action and is also key for its efficient use in bioconversion applications. We report time-lapse visualization of crystalline cellulose degradation by individual cellulosomes from Clostridium thermocellum by atomic force microscopy. Upon binding to cellulose, the cellulosomes switch to elongated, even filamentous shapes and morph these dynamically at below 1 min time scale according to requirements of the substrate surface under attack...
May 27, 2020: ACS Central Science
https://read.qxmd.com/read/32461667/cell-based-analysis-of-cad-variants-identifies-individuals-likely-to-benefit-from-uridine-therapy
#28
JOURNAL ARTICLE
Francisco Del Caño-Ochoa, Bobby G Ng, Malak Abedalthagafi, Mohammed Almannai, Ronald D Cohn, Gregory Costain, Orly Elpeleg, Henry Houlden, Ehsan Ghayoor Karimiani, Pengfei Liu, M Chiara Manzini, Reza Maroofian, Michael Muriello, Ali Al-Otaibi, Hema Patel, Edvardson Shimon, V Reid Sutton, Mehran Beiraghi Toosi, Lynne A Wolfe, Jill A Rosenfeld, Hudson H Freeze, Santiago Ramón-Maiques
PURPOSE: Pathogenic autosomal recessive variants in CAD, encoding the multienzymatic protein initiating pyrimidine de novo biosynthesis, cause a severe inborn metabolic disorder treatable with a dietary supplement of uridine. This condition is difficult to diagnose given the large size of CAD with over 1000 missense variants and the nonspecific clinical presentation. We aimed to develop a reliable and discerning assay to assess the pathogenicity of CAD variants and to select affected individuals that might benefit from uridine therapy...
May 28, 2020: Genetics in Medicine: Official Journal of the American College of Medical Genetics
https://read.qxmd.com/read/32278244/effect-of-the-lactose-source-on-the-ultrasound-assisted-enzymatic-production-of-galactooligosaccharides-and-gluconic-acid
#29
JOURNAL ARTICLE
Fabián Rico-Rodríguez, Mar Villamiel, Laura Ruiz-Aceituno, Juan Carlos Serrato, Antonia Montilla
It is well known that one of the main problems in galactooligosaccharide production (GOS) via tranglycosylation of lactose is the presence of monosaccharides that contribute to increasing the glycaemic index, as is the case of glucose. In this work, as well as studying the effect of ultrasound (US) on glucose oxidase (Gox) activation during gluconic acid (GA) production, we have carried out an investigation into the selective oxidation of glucose to gluconic acid in multienzymatic reactions (β-galactosidase (β-gal) and Gox) assisted by power US using different sources of lactose as substrate (lactose solution, whey permeate, cheese whey)...
October 2020: Ultrasonics Sonochemistry
https://read.qxmd.com/read/32220640/co-immobilization-multienzyme-nanoreactor-with-co-factor-regeneration-for-conversion-of-co2
#30
JOURNAL ARTICLE
Sizhu Ren, Ziyuan Wang, Muhammad Bilal, Yuxiao Feng, Yunhong Jiang, Shiru Jia, Jiandong Cui
Multienzymatic conversion of carbon dioxide (CO2 ) into chemicals has been extensively studied. However, regeneration and reuse of co-factor are still the main problems for the efficient conversion of CO2 . In this study, a nanoscale multienzyme reactor was constrcuted by encapsulating simultaneously carbonic anhydrase (CA), formate dehydrogenase (FateDH), co-factor (NADH), and glutamate dehydrogenases (GDH) into ZIF-8. In the multienzyme reactors, cationic polyelectrolyte (polyethyleneimine, PEI) was doped in the ZIF-8 by dissolving it in the precursors of ZIF-8...
March 24, 2020: International Journal of Biological Macromolecules
https://read.qxmd.com/read/31751123/enhanced-catalysis-from-multienzyme-cascades-assembled-on-a-dna-origami-triangle
#31
JOURNAL ARTICLE
William P Klein, Rasmus P Thomsen, Kendrick B Turner, Scott A Walper, James Vranish, Jørgen Kjems, Mario G Ancona, Igor L Medintz
Developing reliable methods of constructing cell-free multienzyme biocatalytic systems is a milestone goal of synthetic biology. It would enable overcoming the limitations of current cell-based systems, which suffer from the presence of competing pathways, toxicity, and inefficient access to extracellular reactants and removal of products. DNA nanostructures have been suggested as ideal scaffolds for assembling sequential enzymatic cascades in close enough proximity to potentially allow for exploiting of channeling effects; however, initial demonstrations have provided somewhat contradictory results toward confirming this phenomenon...
November 21, 2019: ACS Nano
https://read.qxmd.com/read/31447251/multienzymatic-nanoassemblies-recent-progress-and-applications
#32
REVIEW
Archontoula Giannakopoulou, Elena Gkantzou, Αngeliki Polydera, Haralambos Stamatis
Biotechnological research has turned to multienzymatic nanoassemblies as a promising concept to host multiple applications. Here, we consider important aspects around the development and optimization of such biocatalytic systems and present current advances in utilizing bi- and multienzymatic cascade reactions in diverse fields, including ultrasensitive biosensing, development of pharmaceuticals, and conversion of natural biopolymers to valuable products, highlighting their future potential in the chemical, biotechnological, and pharmaceutical industries...
August 22, 2019: Trends in Biotechnology
https://read.qxmd.com/read/31421454/biochemical-aspects-of-lipase-immobilization-at-polysaccharides-for-biotechnology
#33
REVIEW
Sergei Yu Zaitsev, Anastasia A Savina, Ilia S Zaitsev
The design of immobilized enzyme preparations is an important and relevant area of modern sciences and technologies. Immobilization of enzymes from animal sources (component I) on natural carriers (component II) increases the system stability by protecting the active site of the enzyme from deactivation; facilitates the separation and accelerates the recovery of the enzyme. This makes reuse possible and provides a significant reduction in operating costs. Hydrolytic enzymes (such as lipases) and polysaccharides (such as chitosan) are the most promising of such pairs of components...
August 8, 2019: Advances in Colloid and Interface Science
https://read.qxmd.com/read/31370181/exploring-the-n-glycosylation-profile-of-glycoprotein-b-from-human-cytomegalovirus-expressed-in-cho-and-nicotiana-tabacum-by-2-cells
#34
JOURNAL ARTICLE
Nicolas Smargiasso, Joseph Nader, Stéphane Rioux, Gabriel Mazzucchelli, Marc Boutry, Edwin De Pauw, François Chaumont, Catherine Navarre
The ability to control the glycosylation pattern of recombinant viral glycoproteins represents a major prerequisite before their use as vaccines. The aim of this study consisted of expressing the large soluble ectodomain of glycoprotein B (gB) from Human Cytomegalovirus (HMCV) in Nicotiana tabacum Bright Yellow-2 (BY-2) suspension cells and of comparing its glycosylation profile with that of gB produced in Chinese hamster ovary (CHO) cells. gB was secreted in the BY-2 culture medium at a concentration of 20 mg/L and directly purified by ammonium sulfate precipitation and size exclusion chromatography...
July 31, 2019: International Journal of Molecular Sciences
https://read.qxmd.com/read/31184877/tunable-enzymatic-synthesis-of-the-immunomodulator-lipid-iv-a-to-enable-structure-activity-analysis
#35
JOURNAL ARTICLE
Karthik Sankaranarayanan, Xirui X Antaris, Brad A Palanski, Abrahim El Gamal, Camilla M Kao, William L Fitch, Curt R Fischer, Chaitan Khosla
The Lipid A family of glycolipids, found in the outer membranes of all Gram-negative bacteria, exhibits considerable structural diversity in both lipid and glycan moieties. The lack of facile methods to prepare analogues of these natural products represents a major roadblock in understanding the relationship between their structure and immunomodulatory activities. Here we present a modular, cell-free multienzymatic platform to access these structure-activity relationships. By individually purifying 19 Escherichia coli proteins and reconstituting them in vitro in the presence of acetyl-CoA, UDP- N-acetylglucosamine, NADPH, and ATP, we have developed a system capable of synthesizing Lipid IVA , the first bioactive intermediate in the Lipid A pathway...
June 19, 2019: Journal of the American Chemical Society
https://read.qxmd.com/read/31128746/mucoid-switch-in-burkholderia-cepacia-complex-bacteria-triggers-molecular-mechanisms-and-implications-in-pathogenesis
#36
JOURNAL ARTICLE
Mirela R Ferreira, Sara C Gomes, Leonilde M Moreira
Bacteria produce a vast range of exopolysaccharides (EPSs) to thrive in diverse environmental niches and often display a mucoid phenotype in solid media. One such exopolysaccharide, cepacian, is produced by bacteria of the genus Burkholderia and is of interest due to its role in pathogenesis associated with lung infections in cystic fibrosis (CF) patients. Cepacian is a repeat-unit polymer that has been implicated in biofilm formation, immune system evasion, interaction with host cells, resistance against antimicrobials, and virulence...
2019: Advances in Applied Microbiology
https://read.qxmd.com/read/30920729/enhanced-enzyme-activity-through-scaffolding-on-customizable-self-assembling-protein-filaments
#37
JOURNAL ARTICLE
Samuel Lim, Gi Ahn Jung, Dominic J Glover, Douglas S Clark
Precisely organized enzyme complexes are often found in nature to support complex metabolic reactions in a highly efficient and specific manner. Scaffolding enzymes on artificial materials has thus gained attention as a promising biomimetic strategy to design biocatalytic systems with enhanced productivity. Herein, a versatile scaffolding platform that can immobilize enzymes on customizable nanofibers is reported. An ultrastable self-assembling filamentous protein, the gamma-prefoldin (γ-PFD), is genetically engineered to display an array of peptide tags, which can specifically and stably bind enzymes containing the counterpart domain through simple in vitro mixing...
March 28, 2019: Small
https://read.qxmd.com/read/30173768/cell-free-synthetic-biology-for-pathway-prototyping
#38
JOURNAL ARTICLE
Ashty S Karim, Michael C Jewett
Engineering biological systems for the production of biofuels and bioproducts holds great potential to transform the bioeconomy, but often requires laborious, time-consuming design-build-test cycles. For decades cell-free systems have offered quick and facile approaches to study enzymes with hopes of informing cellular processes, mainly in the form of purified single-enzyme activity assays. Over the past 20 years, cell-free systems have grown to include multienzymatic systems, both purified and crude. By decoupling cellular growth objectives from enzyme pathway engineering objectives, cell-free systems provide a controllable environment to direct substrates toward a single, desired product...
2018: Methods in Enzymology
https://read.qxmd.com/read/30158254/microbial-production-of-conjugated-linoleic-acid-and-conjugated-linolenic-acid-relies-on-a-multienzymatic-system
#39
REVIEW
Ana S Salsinha, Lígia L Pimentel, Ana L Fontes, Ana M Gomes, Luis M Rodríguez-Alcalá
Conjugated linoleic acids (CLAs) and conjugated linolenic acids (CLNAs) have gained significant attention due to their anticarcinogenic and lipid/energy metabolism-modulatory effects. However, their concentration in foodstuffs is insufficient for any therapeutic application to be implemented. From a biotechnological standpoint, microbial production of these conjugated fatty acids (CFAs) has been explored as an alternative, and strains of the genera Propionibacterium , Lactobacillus , and Bifidobacterium have shown promising producing capacities...
December 2018: Microbiology and Molecular Biology Reviews: MMBR
https://read.qxmd.com/read/29727166/manufacturing-multienzymatic-complex-reactors-in-vivo-by-self-assembly-to-improve-the-biosynthesis-of-itaconic-acid-in-escherichia-coli
#40
JOURNAL ARTICLE
Zhongwei Yang, Hongling Wang, Yuxiao Wang, Yuhong Ren, Dongzhi Wei
The self-assembly of multienzyme into bioreactors is of extensive interest to spatially regulate valuable reactions. Despite the important progresses achieved, methods to precisely manufacture multienzymatic complex reactors (MECRs) are still poorly proposed both in vivo and in vitro, particularly for more than three biocatalytically relevant enzymes. Here, we developed a sequential self-assembly system to form multitude MECRs involving three enzymes in the itaconic acid (IA) pathway with two pairs of protein-peptide interactions...
May 18, 2018: ACS Synthetic Biology
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