keyword
https://read.qxmd.com/read/38656994/mcell4-with-bionetgen-a-monte-carlo-simulator-of-rule-based-reaction-diffusion-systems-with-python-interface
#1
JOURNAL ARTICLE
Adam Husar, Mariam Ordyan, Guadalupe C Garcia, Joel G Yancey, Ali S Saglam, James R Faeder, Thomas M Bartol, Mary B Kennedy, Terrence J Sejnowski
Biochemical signaling pathways in living cells are often highly organized into spatially segregated volumes, membranes, scaffolds, subcellular compartments, and organelles comprising small numbers of interacting molecules. At this level of granularity stochastic behavior dominates, well-mixed continuum approximations based on concentrations break down and a particle-based approach is more accurate and more efficient. We describe and validate a new version of the open-source MCell simulation program (MCell4), which supports generalized 3D Monte Carlo modeling of diffusion and chemical reaction of discrete molecules and macromolecular complexes in solution, on surfaces representing membranes, and combinations thereof...
April 24, 2024: PLoS Computational Biology
https://read.qxmd.com/read/38656949/bridge-to-transplant-in-single-ventricle-anatomy-subpulmonary-support-with-excor%C3%A2-ventricular-assist-device-associated-with-pulmonary-artery-reconstruction
#2
JOURNAL ARTICLE
José Joaquín Domínguez Del Castillo, Carlos Manuel Merino Cejas, Elena Gómez Guzmán, Manuel Angel Frías Pérez
Patients with single ventricle continue to be a challenge for heart transplantation (HTx). A poor clinical condition, previous multiple surgical procedures, and possible allosensitization lead to an increased risk of complications. The results have improved in recent series (1). However, patients with preserved ventricular function continues to have a higher rate of mortality (2). Additionally, there are often anatomical alterations of the pulmonary arteries that complicate the surgery (1,3). This report presents a case of tricuspid atresia with pulmonary preassures that contraindicated Fontan surgery, with unfavorable anatomy of the central PAs and a poor clinical situation, in which an EXCOR® VAD (Berlin Heart) was used for subpulmonary mechanical circulatory support (MCS), associated with pulmonary bifurcation reconstruction, as a bridge to HTx...
April 24, 2024: European Journal of Cardio-thoracic Surgery
https://read.qxmd.com/read/38656858/novel-uncertainty-quantification-through-perturbation-assisted-sample-synthesis
#3
JOURNAL ARTICLE
Yifei Liu, Rex Shen, Xiaotong Shen
This paper introduces a novel Perturbation-Assisted Inference (PAI) framework utilizing synthetic data generated by the Perturbation-Assisted Sample Synthesis (PASS) method. The framework focuses on uncertainty quantification in complex data scenarios, particularly involving unstructured data while utilizing deep learning models. On one hand, PASS employs a generative model to create synthetic data that closely mirrors raw data while preserving its rank properties through data perturbation, thereby enhancing data diversity and bolstering privacy...
April 24, 2024: IEEE Transactions on Pattern Analysis and Machine Intelligence
https://read.qxmd.com/read/38656591/acclimatization-and-foraging-of-native-brazilian-stingless-bees-in-arenas-with-covering-materials-of-different-spectral-properties
#4
JOURNAL ARTICLE
Davi de Lacerda Ramos, Luís Carlos Leva Borduchi, Raíssa Costa, Eliana Maria Gouveia Fontes, Raul Alberto Laumann, Cristiano Menezes, Theo Mota, Edison Ryoiti Sujii, Carmen Sílvia Soares Pires
The use of Meliponini for crop pollination in protected environments is practically non-existent. One of the reasons is the difficulty of acclimatizing Meliponini to the temperature and light conditions inside greenhouses. We investigated how covering materials used in greenhouses, which filter different intensities of ultraviolet (UV) light, affect the foraging behaviors, flight orientation, attraction to walls and ceilings, and mortality of Scaptotrigona cf. postica (Letreille), Frieseomelitta varia (Lepeletier), and Melipona quadrifasciata (Lepeletier)...
April 24, 2024: Neotropical Entomology
https://read.qxmd.com/read/38656586/chagas-cardiomyopathy-and-myocardial-sympathetic-denervation
#5
REVIEW
Leonardo Pippa Gadioli, André Schmidt, Benedito Carlos Maciel, Gustavo Jardim Volpe, Marcus Vinicius Simões, José Antonio Marin-Neto
PURPOSE OF REVIEW: More than a century since its discovery, the pathogenesis of Chagas heart disease (CHD) remains incompletely understood. The role of derangements in the autonomic control of the heart in triggering malignant arrhythmia before the appearance of contractile ventricular impairment was reviewed. RECENT FINDINGS: Although previous investigations had demonstrated the anatomical and functional consequences of parasympathetic dysautonomia upon the heart rate control, only recently, coronary microvascular disturbances and sympathetic denervation at the ventricular level have been reported in patients and experimental models of CHD, exploring with nuclear medicine methods their impact on the progression of myocardial dysfunction and cardiac arrhythmias...
April 24, 2024: Current Cardiology Reports
https://read.qxmd.com/read/38656577/accuracy-of-influenza-icd-10-diagnosis-codes-in-identifying-influenza-illness-in-children
#6
JOURNAL ARTICLE
James W Antoon, Tess Stopczynski, Justin Z Amarin, Laura S Stewart, Julie A Boom, Leila C Sahni, Marian G Michaels, John V Williams, Janet A Englund, Eileen J Klein, Mary A Staat, Elizabeth P Schlaudecker, Rangaraj Selvarangan, Jennifer E Schuster, Geoffrey A Weinberg, Peter G Szilagyi, Ariana Perez, Heidi L Moline, Andrew J Spieker, Carlos G Grijalva, Samantha M Olson, Natasha B Halasa
IMPORTANCE: Studies of influenza in children commonly rely on coded diagnoses, yet the ability of International Classification of Diseases, Ninth Revision codes to identify influenza in the emergency department (ED) and hospital is highly variable. The accuracy of newer International Statistical Classification of Diseases and Related Health Problems, Tenth Revision (ICD-10) codes to identify influenza in children is unknown. OBJECTIVE: To determine the accuracy of ICD-10 influenza discharge diagnosis codes in the pediatric ED and inpatient settings...
April 1, 2024: JAMA Network Open
https://read.qxmd.com/read/38656567/role-of-the-left-atrial-appendage-closure-in-preventing-thromboembolism-in-atrial-fibrillation-what-is-the-importance-for-chronic-kidney-disease-patients
#7
EDITORIAL
Simonetta Genovesi, Stefano Bianchi, Carlo Basile
No abstract text is available yet for this article.
April 24, 2024: Journal of Nephrology
https://read.qxmd.com/read/38656366/-not-available
#8
Tilman Calliess, Bernhard Christen, Carlo Theus-Steinmann
No abstract text is available yet for this article.
April 24, 2024: Orthopadie (Heidelb)
https://read.qxmd.com/read/38656287/diagnosis-management-and-therapeutic-options-for-eosinophilic-esophagitis
#9
REVIEW
Marco Caminati, Gianenrico Senna, Matteo Maule, Antonio Di Sabatino, Carlo Maria Rossi
PURPOSE OF REVIEW: Eosinophilic esophagitis is a chronic and commonly evolving condition leading to relevant and potentially irreversible burden in terms of tissue damage and related functional impairment, thus significantly impacting on quality of life. The aim of the present review is to summarize the recent advances in terms of diagnostic work-up and pharmacological and nonpharmacological management of the disease, under the broader perspective of type 2 inflammation. RECENT FINDINGS: Two major novelties have prompted an innovative approach to EoE...
June 1, 2024: Current Opinion in Allergy and Clinical Immunology
https://read.qxmd.com/read/38656241/autonomous-artificial-intelligence-versus-teleophthalmology-for-diabetic-retinopathy
#10
JOURNAL ARTICLE
Donatella Musetti, Carlo Alberto Cutolo, Monica Bonetto, Mauro Giacomini, Davide Maggi, Giorgio Luciano Viviani, Ilaria Gandin, Carlo Enrico Traverso, Massimo Nicolò
Purpose: To assess the role of artificial intelligence (AI) based automated software for detection of Diabetic Retinopathy (DR) compared with the evaluation of digital retinography by two double masked retina specialists. Methods: Two-hundred one patients (mean age 65 ± 13 years) with type 1 diabetes mellitus or type 2 diabetes mellitus were included. All patients were undergoing a retinography and spectral domain optical coherence tomography (SD-OCT, DRI 3D OCT-2000, Topcon) of the macula...
April 24, 2024: European Journal of Ophthalmology
https://read.qxmd.com/read/38656233/erratum-for-identification-of-precise-3d-ct-radiomics-for-habitat-computation-by-machine-learning-in-cancer
#11
Olivia Prior, Carlos Macarro, Víctor Navarro, Camilo Monreal, Marta Ligero, Alonso Garcia-Ruiz, Garazi Serna, Sara Simonetti, Irene Braña, Maria Vieito, Manuel Escobar, Jaume Capdevila, Annette T Byrne, Rodrigo Dienstmann, Rodrigo Toledo, Paolo Nuciforo, Elena Garralda, Francesco Grussu, Kinga Bernatowicz, Raquel Perez-Lopez
No abstract text is available yet for this article.
May 2024: Radiology. Artificial intelligence
https://read.qxmd.com/read/38656160/mechanisms-of-injury-leading-to-concussions-in-collegiate-soccer-players-a-care-consortium-study
#12
JOURNAL ARTICLE
Jacob Jo, Adrian J Boltz, Kristen L Williams, Paul F Pasquina, Thomas W McAllister, Michael A McCrea, Steven P Broglio, Scott L Zuckerman, Douglas P Terry, Kristy Arbogast, Holly J Benjamin, Alison Brooks, Kenneth L Cameron, Sara P D Chrisman, James R Clugston, Micky Collins, John DiFiori, James T Eckner, Carlos Estevez, Luis A Feigenbaum, Joshua T Goldman, April Hoy, Thomas W Kaminski, Louise A Kelly, Anthony P Kontos, Dianne Langford, Laura J Lintner, Christina L Master, Jane McDevitt, Gerald McGinty, Chris Miles, Justus Ortega, Nicholas Port, Steve Rowson, Julianne Schmidt, Adam Susmarski, Steven Svoboda
BACKGROUND: Few previous studies have investigated how different injury mechanisms leading to sport-related concussion (SRC) in soccer may affect outcomes. PURPOSE: To describe injury mechanisms and evaluate injury mechanisms as predictors of symptom severity, return to play (RTP) initiation, and unrestricted RTP (URTP) in a cohort of collegiate soccer players. STUDY DESIGN: Cohort study; Level of evidence, 2. METHODS: The Concussion Assessment, Research and Education (CARE) Consortium database was used...
April 24, 2024: American Journal of Sports Medicine
https://read.qxmd.com/read/38655946/individual-and-contextual-factors-associated-with-the-survival-of-patients-with-severe-acute-respiratory-syndrome-by-covid-19-in-brazil
#13
JOURNAL ARTICLE
Carlos Martins Neto, Fábio Nogueira da Silva, José de Jesus Dias Júnior, Maria Dos Remédios Freitas Carvalho Branco, Alcione Miranda Dos Santos, Bruno Luciano Carneiro Alves de Oliveira
OBJECTIVE: To analyze the influence of individual and contextual factors of the hospital and the municipality of care on the survival of patients with Severe Acute Respiratory Syndrome due to COVID-19. METHODS: Hospital cohort study with data from 159,948 adults and elderly with Severe Acute Respiratory Syndrome due to COVID-19 hospitalized from January 1 to December 31, 2022 and reported in the Influenza Epidemiological Surveillance Information System. The contextual variables were related to the structure, professionals and equipment of the hospital establishments and socioeconomic and health indicators of the municipalities...
2024: Brazilian Journal of Epidemiology
https://read.qxmd.com/read/38655944/hiv-and-aids-in-the-state-of-paran%C3%A3-brazil-2007-2022-trends-and-spatiotemporal-distribution
#14
JOURNAL ARTICLE
Rafaela Marito Montanha, Thamy Barbara Gioia, Antônio Carlos Vieira Ramos, Natalia Marciano de Araujo Ferreira, Miguel Angel Fuentealba Torres, Rosângela Aparecida Pimenta, Gilselena Kerbauy, Ricardo Alexandre Arcêncio, Flávia Meneguetti Pieri
OBJECTIVE: The aim of this study was to analyze the spatiotemporal evolution of the incidence rates of human immunodeficiency virus (HIV) and acquired immune deficiency syndrome (AIDS) in the state of Paraná, Brazil. METHODS: An ecological study with an analytical component of time series analysis was conducted in the state of Paraná from 2007 to 2022. The data source was the Notifiable Diseases Information System. To study the trend, the Prais-Winsten generalized linear regression model was used by decomposing the time series, and for spatial analysis, the Moran's index was applied...
2024: Brazilian Journal of Epidemiology
https://read.qxmd.com/read/38655876/factors-associated-with-post-hospitalization-dialysis-dependence-in-ecmo-patients-who-required-continuous-renal-replacement-therapy
#15
JOURNAL ARTICLE
Carlos Rodrigo Franco Palacios, Rudiona Hoxhaj, Catlyn Thigpen, Jeffrey Jacob
OBJECTIVE: This single center retrospective study aimed to describe the variables associated with outpatient dialysis dependence in extracorporeal membrane oxygenation (ECMO) patients who needed continuous renal replacement therapy (CRRT) for acute kidney injury (AKI) during their hospitalization. METHODS: Retrospective study of patients who required ECMO-CRRT. RESULTS: Between the years of 2016 and 2022, 202 patients required ECMO-CRRT. One hundred and six patients (52...
December 2024: Renal Failure
https://read.qxmd.com/read/38655820/editorial-infiltrative-pattern-of-invasion-is-independently-associated-with-shorter-survival-and-desmoplastic-stroma-markers-fap-and-thbs2-in-mucinous-ovarian-carcinoma
#16
EDITORIAL
Carlos Parra-Herran, Pavel Dundr, W Glenn McCluggage
No abstract text is available yet for this article.
June 2024: Histopathology
https://read.qxmd.com/read/38655802/food-insecurity-in-children-with-heart-disease
#17
JOURNAL ARTICLE
Joseph Burns, Derek M Norton, Paul N Cooper, Patrick E Day, Mounica Y Rao, Carlos Andres Sanchez Parra, Alexander J Kiener
PURPOSE OF REVIEW: This review discusses the epidemiology of food insecurity (FI) and its consequences in children with congenital heart disease. We aimed to highlight current interventions to screen and address food insecurity in the context of pediatric cardiology and to offer strategies for providers to engage in this meaningful work. RECENT FINDINGS: Food insecurity is consistently associated with poor health outcomes in children. In the United States, 17.3% of households with children experience FI...
March 27, 2024: Current Opinion in Pediatrics
https://read.qxmd.com/read/38655786/the-performance-of-marginal-structural-models-for-estimating-risk-differences-and-relative-risks-using-weighted-univariate-generalized-linear-models
#18
JOURNAL ARTICLE
Peter C Austin
We used Monte Carlo simulations to compare the performance of marginal structural models (MSMs) based on weighted univariate generalized linear models (GLMs) to estimate risk differences and relative risks for binary outcomes in observational studies. We considered four different sets of weights based on the propensity score: inverse probability of treatment weights with the average treatment effect as the target estimand, weights for estimating the average treatment effect in the treated, matching weights and overlap weights...
April 24, 2024: Statistical Methods in Medical Research
https://read.qxmd.com/read/38655737/low-temperature-behaviors-of-the-dipolar-magnet-dy3sb3zn2o14-with-a-strongly-site-mixing-disordered-kagome-lattice
#19
JOURNAL ARTICLE
Chengyu Jiang, Yao Wang, Z F Ding, Lei Shu
Interesting behaviors may emerge in the magnetic frustrated materials with significant site-mixing disorder. We present the results of the structural, magnetic susceptibility, and specific heat measurements of Dy3 Sb3 Zn2 O14 with ~20\% Dy/Zn site-mixing disorder, which results in either a diluted 2D triangular lattice, or an immediate structure between the kagome and pyrochlore lattice. In addition to the sharp anomaly of the temperature dependence of specific heat at T ~ 0.35 K, which was attributed to the emergent charge order state for the sample with less disorder, a broad peak at T ~ 1...
April 23, 2024: Journal of Physics. Condensed Matter: An Institute of Physics Journal
https://read.qxmd.com/read/38655647/frame-setting-process-and-movement
#20
JOURNAL ARTICLE
José Carlos Calich
The author addresses the theme of frame and setting in psychoanalysis, suggesting that they are "functions" of the psychoanalytic process. Frame is defined as the external components of the context that enable the development of a process, and setting as the primarily psychoanalytic elements within the analyst's mind, necessary for establishing an analysing situation where a process should take place. The author emphasizes that the characteristics of both also define the outline of the process, while discussing attributes that would aid in its development...
April 2024: International Journal of Psycho-analysis
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