keyword
https://read.qxmd.com/read/38603950/transcriptomic-investigation-and-biomarker-discovery-for-zinc-response-in-oysters-crassostrea-gasar
#1
JOURNAL ARTICLE
Clarissa P Ferreira, Renato S Moreira, Camila L V Bastolla, Miguel Saldaña-Serrano, Daína Lima, Carlos H A M Gomes, Afonso C D Bainy, Karim H Lüchmann
In an era of unprecedented industrial and agricultural growth, metal contamination in marine environments is a pressing concern. Sentinel organisms such as the mangrove oyster Crassostrea gasar provide valuable insights into these environments' health. However, a comprehensive understanding of the molecular mechanisms underlying their response to metal exposure remains elusive. To address this gap, we reanalyzed the 454-sequencing data of C. gasar, utilizing an array of bioinformatics workflow of CDTA (Combined De Novo Transcriptome Assembly) to generate a more representative assembly...
April 10, 2024: Marine Genomics
https://read.qxmd.com/read/38597334/improving-the-stability-and-kinetic-inertness-of-mn-ii-complexes-by-increasing-the-bridge-length-in-bicyclic-cdta-like-ligands
#2
JOURNAL ARTICLE
Jonathan Martinelli, Elisabetta Romano, Attila Laczovics, David Horváth, Elena Grattoni, Zsolt Baranyai, Lorenzo Tei
Kinetic inertness of Mn(II)-based MRI contrast agents can be improved by increasing the rigidity of the polydentate ligand that tightly coordinate the metal ion. Taking inspiration from the remarkable increase in kinetic inertness of [Mn(CDTA)]2- compared to [Mn(EDTA)]2- due to the cyclohexyl backbone rigidity, we devised that bicyclic ligands would further improve the kinetic inertness of the Mn(II) complexes. The length of the alkyl bridge on the cyclohexane ring was varied from methylene (BCH-DTA), ethylene (BCO-DTA) to propylene (BCN-DTA) to evaluate the influence of the different trans-diaminotetraacetate ligands on relaxometric, thermodynamic and kinetic properties of the Mn(II)-complexes...
April 10, 2024: Chemistry: a European Journal
https://read.qxmd.com/read/38319111/-campylobacter-jejuni-extracellular-vesicles-harboring-cytolethal-distending-toxin-bind-host-cell-glycans-and-induce-cell-cycle-arrest-in-host-cells
#3
JOURNAL ARTICLE
Lena Hoang My Le, Bassam Elgamoudi, Nina Colon, Angus Cramond, Frederic Poly, Le Ying, Victoria Korolik, Richard L Ferrero
Cytolethal distending toxins (CDTs) are released by Gram-negative pathogens into the extracellular medium as free toxin or associated with extracellular vesicles (EVs), commonly known as outer membrane vesicles (OMVs). CDT production by the gastrointestinal pathogen Campylobacter jejuni has been implicated in colorectal tumorigenesis. Despite CDT being a major virulence factor for C. jejuni , little is known about the EV-associated form of this toxin. To address this point, C. jejuni mutants lacking each of the three CDT subunits (A, B, and C) were generated...
February 5, 2024: Microbiology Spectrum
https://read.qxmd.com/read/38308829/characterization-of-campylobacter-jejuni-and-campylobacter-coli-isolates-from-chicken-offal-in-metro-manila-philippines-insights-from-virulence-gene-prevalence-and-multilocus-sequence-typing-analysis
#4
JOURNAL ARTICLE
M S E Subejano, G Penuliar
Campylobacteriosis is a human infection primarily caused by Campylobacter jejuni and Campylobacter coli. Consumption of contaminated chicken and poultry products is the main mode of transmission. These bacteria possess virulence factors, including adhesins and toxins, which contribute to their pathogenesis. Moreover, their large genomes undergo frequent genetic recombination, resulting in a high degree of genetic diversity. However, limited information is available regarding the virulence and genotypic diversity profiles of these microorganisms in the Philippines...
December 1, 2023: Tropical Biomedicine
https://read.qxmd.com/read/38130588/analysis-of-risk-factors-for-community-acquired-clostridioides-difficile-diarrhea-in-children-a-case-control-study-in-chenzhou-china
#5
JOURNAL ARTICLE
Yong Zhou, Liping He, Cuimei Chen, Huiwen Zeng, Andrew S Day, Consolato M Sergi, Huilong Fang, Qun Xie, Yuan Wu
BACKGROUND: Most previous studies on Clostridium difficile infection (CDI) mainly focused on adults with underlying diseases or critical illnesses. However, the number of CDI cases in children has also significantly increased, especially the growth of community-acquired CDI, which has attracted attention. This study was conducted to examine the toxin gene characteristics and the risk factors associated with community-acquired CDI (CA-CDI) in children with diarrhea. METHODS: Children with diarrhea before admission or within 48 hours of hospitalization were included in the study...
November 28, 2023: Translational Pediatrics
https://read.qxmd.com/read/38035327/revisiting-bacterial-cytolethal-distending-toxin-structure-and-function
#6
JOURNAL ARTICLE
Henry Chen, Claire J Ang, Molly Crowder, William M Brieher, Steven R Blanke
Cytolethal distending toxins (CDTs) are intracellular-acting bacterial genotoxins generated by a diverse group of mucocutaneous human pathogens. CDTs must successfully bind to the plasma membrane of host cells in order to exert their modulatory effects. Maximal toxin activity requires all three toxin subunits, CdtA, CdtB, and CdtC, which, based primarily on high-resolution structural data, are believed to preassemble into a tripartite complex necessary for toxin activity. However, biologically active toxin has not been experimentally demonstrated to require assembly of the three subunits into a heterotrimer...
2023: Frontiers in Cellular and Infection Microbiology
https://read.qxmd.com/read/38029099/genotypic-characterization-antimicrobial-susceptibility-and-virulence-determinants-of-campylobacter-jejuni-and-campylobacter-coli-isolated-from-pastured-poultry-farms
#7
JOURNAL ARTICLE
Amal Awad, Hung-Yueh Yeh, Hazem Ramadan, Michael J Rothrock
AIM: Campylobacter is the leading bacterial pathogen that causes foodborne illnesses worldwide. Pasture farming is regarded as an important source of agricultural production for small farming communities. Consumer preference for pasture-raised animal products has increased; however, there is a paucity of information on the microbiological quality of pasture-raised poultry products. The purpose of this study was to explore genetic relatedness of thermophilic Campylobacter isolates, to assess antibiotic resistance phenotypically and genotypically, and to screen the presence of virulence determinants of Campylobacter isolates from pasture-raised poultry farms from southeastern United States...
2023: Frontiers in Microbiology
https://read.qxmd.com/read/37981921/diarrheal-woes-in-transplantation-from-real-world-settings-with-special-focus-on-clostridium-difficile-infection
#8
JOURNAL ARTICLE
Uday Yanamandra, Alka Khadwal, Setu Gupta, Timmy Thomas, Deepesh Lad, Neelam Taneja, Gaurav Prakash, Neelam Varma, Subhash Varma, Pankaj Malhotra
BACKGROUND: Diarrhea is the major cause of discomfort and morbidity of patients undergoing hematopoietic stem cell transplant (HSCT). The cause of diarrhea may be infective or non-infective. METHODS: This is a prospective single center observational study from North India conducted over a period of approximately 4 years among 105 patients who underwent HSCT (autologous-72, allogeneic-33). The objective of the study was to identify the overall incidence and characteristics of diarrhea in HSCT in the real world, to evaluate any differences among allogeneic or autologous transplants, incidence of C Difficile among diarrheal patients, and antimicrobial usage among these patients...
2023: Medical Journal, Armed Forces India
https://read.qxmd.com/read/37955945/effect-of-hydration-equilibria-on-the-relaxometric-properties-of-gd-iii-complexes-new-insights-into-old-systems
#9
JOURNAL ARTICLE
Alessandro Nucera, Carlos Platas-Iglesias, Fabio Carniato, Mauro Botta
We present a detailed relaxometric and computational investigation of three Gd(III) complexes that exist in solution as an equilibrium of two species with a different number of coordinated water molecules: [Gd(H2 O) q ]3+ ( q = 8, 9), [Gd(EDTA)(H2 O) q ]- and [Gd(CDTA)(H2 O) q ]- ( q = 2, 3). 1 H nuclear magnetic relaxation dispersion (NMRD) data were recorded from aqueous solutions of these complexes using a wide Larmor frequency range (0.01-500 MHz). These data were complemented with 17 O transverse relaxation rates and chemical shifts recorded at different temperatures...
November 13, 2023: Dalton Transactions: An International Journal of Inorganic Chemistry
https://read.qxmd.com/read/37884782/analysis-of-clostridioides-difficile-infection-in-children-with-diarrhea-in-two-hospitals-in-southern-brazil
#10
JOURNAL ARTICLE
Adriane C Maestri, Dany Mesa, Thais M Vasconcelos, Damaris Krul, Marinei C Ricieri, Fabio A Motta, Libera M Dalla-Costa, Sonia M Raboni, Keite S Nogueira
Clostridioides difficile infection (CDI) has been increasingly observed in children, but there is a lack of epidemiological and molecular data on CDI in Latin America. This prospective cohort study aimed to investigate the role of CDI in children with diarrhea. It included 105 children with antimicrobial-associated diarrhea (AAD) and analyzed the molecular characteristics of strains isolated from two hospitals in southern Brazil between 2017 and 2020. Fecal samples from the participants were tested for glutamate dehydrogenase (GDH) and A/B toxins using a rapid enzyme immunoassay...
October 26, 2023: Current Microbiology
https://read.qxmd.com/read/37874390/campylobacter-jejuni-and-campylobacter-coli-in-human-stool-samples-antibiotic-resistance-profiles-putative-virulence-determinants-and-molecular-characterization-of-the-isolates
#11
JOURNAL ARTICLE
Harun Hizlisoy, Pinar Sagiroglu, Mukaddes Barel, Adalet Dishan, Candan Gungor, Kursat Koskeroglu, Serhat Hizlisoy, Mustafa Altay Atalay
Campylobacters, especially C. jejuni and C. coli, have become one of the leading causes of acute gastroenteritis in humans worldwide in recent years. We aimed to investigate the presence, antimicrobial resistance, putative virulence genes, and molecular characterization of C. jejuni and C. coli recovered from human acute gastroenteritis cases in the study. In the study, suspected Campylobacter spp. isolates were obtained in 43 (5%) feces samples collected from a total of 850 patients who applied to the Erciyes University Medical Faculty acute clinic between March 2019 and February 2020...
October 24, 2023: World Journal of Microbiology & Biotechnology
https://read.qxmd.com/read/37764368/determination-of-calcium-in-meat-products-by-automatic-titration-with-1-2-diaminocyclohexane-n-n-n-n-tetraacetic-acid
#12
JOURNAL ARTICLE
Alexander Shyichuk, Maria Kowalska, Iryna Shyychuk, Jan Lamkiewicz, Dorota Ziółkowska
Mechanically separated meat (MSM) is a by-product of the poultry industry that requires routine quality assessment. Calcium content is an indirect indicator of bone debris in MSM but is difficult to determine by EDTA titration due to the poor solubility of calcium phosphate. Therefore, 1,2-diaminocyclohexane-N,N,N',N'-tetraacetic acid was used instead, which has two orders of magnitude higher affinity for calcium ions. In addition, the auxiliary complexing agents triethanolamine and Arsenazo III, an indicator that is sensitive to low calcium concentrations, were used...
September 13, 2023: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/37758144/toxicological-effects-and-underlying-mechanisms-of-chlorination-derived-metformin-byproducts-in-escherichia-coli
#13
JOURNAL ARTICLE
Yuanzhen He, Hui Jin, Feng Ju
Chlorination-derived byproducts of the emerging contaminant metformin, such as (3E)-3-(chloroimino)-N,N-dimethyl-3H-1,2,4-triazol-5-amine (3,3-CDTA) and N-cyano-N,N-dimethylcarbaminmidic chloride (NCDC), occur in global waters and are toxic to organisms, from bacteria to mice. However, the mechanisms underlying their toxicity remain unknown. Here, we explored the toxicological effects and potential molecular mechanisms of 3,3-CDTA and NCDC at milligram concentrations, using Escherichia coli as a model organism...
September 25, 2023: Science of the Total Environment
https://read.qxmd.com/read/37653894/disruption-of-a-duf247-containing-protein-alters-cell-wall-polysaccharides-and-reduces-growth-in-arabidopsis
#14
JOURNAL ARTICLE
Pitchaporn Wannitikul, Pakorn Wattana-Amorn, Sukhita Sathitnaitham, Jenjira Sakulkoo, Anongpat Suttangkakul, Passorn Wonnapinij, George W Bassel, Rachael Simister, Leonardo D Gomez, Supachai Vuttipongchaikij
Plant cell wall biosynthesis is a complex process that requires proteins and enzymes from glycan synthesis to wall assembly. We show that disruption of At3g50120 ( DUF247-1 ), a member of the DUF247 multigene family containing 28 genes in Arabidopsis , results in alterations to the structure and composition of cell wall polysaccharides and reduced growth and plant size. An ELISA using cell wall antibodies shows that the mutants also exhibit ~50% reductions in xyloglucan (XyG), glucuronoxylan (GX) and heteromannan (HM) epitopes in the NaOH fraction and ~50% increases in homogalacturonan (HG) epitopes in the CDTA fraction...
May 15, 2023: Plants (Basel, Switzerland)
https://read.qxmd.com/read/37345577/novel-nanogels-loaded-with-mn-ii-chelates-as-effective-and-biologically-stable-mri-probes
#15
JOURNAL ARTICLE
Fabio Carniato, Marco Ricci, Lorenzo Tei, Francesca Garello, Chiara Furlan, Enzo Terreno, Enrico Ravera, Giacomo Parigi, Claudio Luchinat, Mauro Botta
Here it is described nanogels (NG) based on a chitosan matrix, which are covalently stabilized by a bisamide derivative of Mn-t-CDTA (t-CDTA = trans-1,2-diaminocyclohexane-N,N,N',N'-tetraacetic acid). the Mn(II) complex acts both as a contrast medium and as a cross-linking agent. These nanogels are proposed as an alternative to the less stable paramagnetic nanogels obtained by electrostatic interactions between the polymeric matrix and paramagnetic Gd(III) chelates. The present novel nanogels show: i) relaxivity values seven times higher than that of typical monohydrated Mn(II) chelates at the clinical fields, thanks to the combination of a restricted mobility of the complex with a fast exchange of the metal-bound water molecule; ii) high stability of the formulation over time at pH 5 and under physiological conditions, thus excluding metal leaking or particles aggregation; iii) good extravasation and accumulation, with a maximum contrast achieved at 24 h post-injection in mice bearing subcutaneous breast cancer tumor; iv) high T1 contrast (1 T) in the tumor 24 h post-injection...
June 22, 2023: Small
https://read.qxmd.com/read/37323906/prevalence-genomic-characterization-and-antimicrobial-resistance-of-campylobacter-spp-isolates-in-pets-in-shenzhen-china
#16
JOURNAL ARTICLE
Changyan Ju, Yanping Ma, Bi Zhang, Guilan Zhou, Hairui Wang, Muhua Yu, Jiaoming He, Yongxiang Duan, Maojun Zhang
The prevalence of Campylobacter spp .in pets is a potential concern for human health. However, little is known about the pet-related Campylobacter spp. in China. A total of 325 fecal samples were collected from dogs, cats, and pet foxes. Campylobacter spp. were isolated by culture, and MALDI-TOF MS was used to identify 110 Campylobacter spp. isolates in total. C. upsaliensis (30.2%, 98/325), C. helveticus (2.5%, 8/325), and C. jejuni (1.2%, 4/325) were the three found species. In dogs and cats, the prevalence of Campylobacter spp...
2023: Frontiers in Microbiology
https://read.qxmd.com/read/37237793/persistence-of-campylobacter-spp-in-poultry-flocks-after-disinfection-virulence-and-antimicrobial-resistance-traits-of-recovered-isolates
#17
JOURNAL ARTICLE
Manel Gharbi, Awatef Béjaoui, Safa Hamrouni, Amel Arfaoui, Abderrazak Maaroufi
To investigate the persistence risk of Campylobacter spp. in poultry farms, and to study the virulence and antimicrobial resistance characteristics in the recovered strains, we collected 362 samples from breeding hen flocks, before and after disinfection. The virulence factors were investigated by targeting the genes; flaA , cadF , racR , virB11 , pldA , dnaJ , cdtA , cdtB , cdtC , ciaB , wlaN , cgtB , and ceuE by PCR. Antimicrobial susceptibility was tested and genes encoding antibiotic resistance were investigated by PCR and MAMA-PCR...
May 10, 2023: Antibiotics
https://read.qxmd.com/read/37159947/development-of-a-suite-of-gadolinium-free-oatp1-targeted-paramagnetic-probes-for-liver-mri
#18
JOURNAL ARTICLE
Sean W McRae, Michael Cleary, Daniel DeRoche, Francisco M Martinez, Ying Xia, Peter Caravan, Eric M Gale, John A Ronald, Timothy J Scholl
Five amphiphilic, anionic Mn(II) complexes were synthesized as contrast agents targeted to organic anion transporting polypeptide transporters (OATP) for liver magnetic resonance imaging (MRI). The Mn(II) complexes are synthesized in three steps, each from the commercially available trans -1,2-diaminocyclohexane- N , N , N ', N '-tetraacetic acid (CDTA) chelator, with T 1 -relaxivity of complexes ranging between 2.3 and 3.0 mM-1 s-1 in phosphate buffered saline at an applied field strength of 3.0 T. Pharmacokinetics were assessed in female BALB/c mice by acquiring T 1 -weighted images dynamically for 70 min after agent administration and determining contrast enhancement and washout in various organs...
May 9, 2023: Journal of Medicinal Chemistry
https://read.qxmd.com/read/37158737/presence-of-functionally-active-cytolethal-distending-toxin-genes-on-a-conjugative-plasmid-in-a-clinical-isolate-of-providencia-rustigianii
#19
JOURNAL ARTICLE
Jayedul Hassan, Sharda Prasad Awasthi, Noritoshi Hatanaka, Phuong Hoai Hoang, Akira Nagita, Atsushi Hinenoya, Shah M Faruque, Shinji Yamasaki
Providencia rustigianii is potentially enteropathogenic in humans. Recently, we identified a P. rustigianii strain carrying a part of the cdtB gene homologous to that of Providencia alcalifacines that produces an exotoxin called cytolethal distending toxin (CDT), encoded by three subunit genes ( cdtA , cdtB , and cdtC ). In this study, we analyzed the P. rustigianii strain for possible presence of the entire cdt gene cluster and its organization, location, and mobility, as well as expression of the toxin as a putative virulence factor of P...
May 9, 2023: Infection and Immunity
https://read.qxmd.com/read/37101693/examining-the-extent-of-contamination-antibiotic-resistance-and-genetic-diversity-of-clostridioides-clostridium-difficile-strains-in-meat-and-feces-of-some-native-birds-of-iran
#20
JOURNAL ARTICLE
Akbar Ansarian Barezi, Amir Shakerian, Ebrahim Rahimi, Zahra Esfandiari
Clostridioides ( Clostridium) difficile ( C. difficile ) is one of the essential enteropathogens in humans and livestock and is a severe health threat, according to the Centre for Disease Control and Prevention. Also, antimicrobials are one of the most critical risk factors for C. difficile infection (CDI). The present study examined the infection, antibiotic resistance, and genetic diversity of the C. difficile strains in the meat and feces of some native birds (chicken, duck, quail, and partridge) in the Shahrekord region, Iran, from July 2018 to July 2019...
2023: BioMed Research International
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