keyword
https://read.qxmd.com/read/38654733/diabetes-primes-neutrophils-for-neutrophil-extracellular-trap-formation-through-trained-immunity
#1
JOURNAL ARTICLE
Sanjeeb Shrestha, Yu-Bin Lee, Hoyul Lee, Yeon-Kyung Choi, Bo-Yoon Park, Mi-Jin Kim, Young-Jin Youn, Sun-Hwa Kim, Soo-Jung Jung, Dong-Keun Song, Hee Kyung Jin, Jae-Sung Bae, In-Kyu Lee, Jae-Han Jeon, Chang-Won Hong
Neutrophils are primed for neutrophil extracellular trap (NET) formation during diabetes, and excessive NET formation from primed neutrophils compromises wound healing in patients with diabetes. Here, we demonstrate that trained immunity mediates diabetes-induced NET priming in neutrophils. Under diabetic conditions, neutrophils exhibit robust metabolic reprogramming comprising enhanced glycolysis via the pentose phosphate pathway and fatty acid oxidation, which result in the accumulation of acetyl-coenzyme A...
2024: Research: a science partner journal
https://read.qxmd.com/read/38652683/chemical-genetics-in-c-elegans-identifies-anticancer-mycotoxins-chaetocin-and-chetomin-as-potent-inducers-of-a-nuclear-metal-homeostasis-response
#2
JOURNAL ARTICLE
Elijah Abraham, A M Gihan K Athapaththu, Kalina R Atanasova, Qi-Yin Chen, Taylor J Corcoran, Juan Piloto, Cheng-Wei Wu, Ranjala Ratnayake, Hendrik Luesch, Keith P Choe
C. elegans numr-1/2 (<u>nu</u>clear-localized <u>m</u>etal-<u>r</u>esponsive) is an identical gene pair encoding a nuclear protein previously shown to be activated by cadmium and disruption of the integrator RNA metabolism complex. We took a chemical genetic approach to further characterize regulation of this novel metal response by screening 41,716 compounds and extracts for numr-1p::GFP activation. The most potent activator was chaetocin, a fungal 3,6-epidithiodiketopiperazine (ETP) with promising anticancer activity...
April 23, 2024: ACS Chemical Biology
https://read.qxmd.com/read/38650694/hdac10-inhibition-represses-melanoma-cell-growth-and-braf-inhibitor-resistance-via-upregulating-sparc-expression
#3
JOURNAL ARTICLE
Hongbo Ling, Yixuan Li, Changmin Peng, Shengyu Yang, Edward Seto
Secreted protein acidic and rich in cysteine (SPARC), a conserved secreted glycoprotein, plays crucial roles in regulating various biological processes. SPARC is highly expressed and has profound implications in several cancer types, including melanoma. Understanding the mechanisms that govern SPARC expression in cancers has the potential to lead to improved cancer diagnosis, prognosis, treatment strategies, and patient outcomes. Here, we demonstrate that histone deacetylase 10 (HDAC10) is a key regulator of SPARC expression in melanoma cells...
June 2024: NAR cancer
https://read.qxmd.com/read/38646545/exploring-the-role-of-cited-transcriptional-regulators-in-the-control-of-macrophage-polarization
#4
REVIEW
Derek A Wiggins, Jack N Maxwell, David E Nelson
Macrophages are tissue resident innate phagocytic cells that take on contrasting phenotypes, or polarization states, in response to the changing combination of microbial and cytokine signals at sites of infection. During the opening stages of an infection, macrophages adopt the proinflammatory, highly antimicrobial M1 state, later shifting to an anti-inflammatory, pro-tissue repair M2 state as the infection resolves. The changes in gene expression underlying these transitions are primarily governed by nuclear factor kappaB (NF-κB), Janus kinase (JAK)/signal transducer and activation of transcription (STAT), and hypoxia-inducible factor 1 (HIF1) transcription factors, the activity of which must be carefully controlled to ensure an effective yet spatially and temporally restricted inflammatory response...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38645390/editorial-transcriptomics-of-fruit-growth-development-and-ripening
#5
EDITORIAL
Neftali Ochoa-Alejo, Maria Carmen Gómez-Jiménez, Octavio Martínez
No abstract text is available yet for this article.
2024: Frontiers in Plant Science
https://read.qxmd.com/read/38641672/the-histone-lysine-acetyltransferase-kat2b-inhibits-cholangiocarcinoma-growth-evidence-for-interaction-with-sp1-to-regulate-nf2-yap-signaling
#6
JOURNAL ARTICLE
Wenbo Ma, Jinqiang Zhang, Weina Chen, Nianli Liu, Tong Wu
BACKGROUND: Cholangiocarcinoma (CCA) is a highly malignant cancer of the biliary tract with poor prognosis. Further mechanistic insights into the molecular mechanisms of CCA are needed to develop more effective target therapy. METHODS: The expression of the histone lysine acetyltransferase KAT2B in human CCA was analyzed in human CCA tissues. CCA xenograft was developed by inoculation of human CCA cells with or without KAT2B overexpression into SCID mice. Western blotting, ChIP-qPCR, qRT-PCR, protein immunoprecipitation, GST pull-down and RNA-seq were performed to delineate KAT2B mechanisms of action in CCA...
April 19, 2024: Journal of Experimental & Clinical Cancer Research: CR
https://read.qxmd.com/read/38639711/current-trends-in-clinical-trials-and-the-development-of-small-molecule-epigenetic-inhibitors-as-cancer-therapeutics
#7
REVIEW
Nazanin Zohourian, James Al Brown
Epigenetic mechanisms control and regulate normal chromatin structure and gene expression patterns, with epigenetic dysregulation observed in many different cancer types. Importantly, epigenetic modifications are reversible, offering the potential to silence oncogenes and reactivate tumor suppressors. Small molecule drugs manipulating these epigenetic mechanisms are at the leading edge of new therapeutic options for cancer treatment. The clinical use of histone deacetyltransferases inhibitors (HDACi) demonstrates the effectiveness of targeting epigenetic mechanisms for cancer treatment...
April 19, 2024: Epigenomics
https://read.qxmd.com/read/38636996/-histone-acetylation-in-the-development-and-regeneration-of-craniofacial-hard-tissue
#8
JOURNAL ARTICLE
X Q Jiang
Craniofacial hard tissue mainly includes craniofacial bone and tooth, which is one of the important parts of the mouth-jaw system. Congenital aplasia, tumors and trauma can cause large craniofacial hard tissue defects, which are detrimental to the facial appearance and function of patients, and affect the physical and mental health of patients. Histone acetylation modification is the earliest and most widely studied histone modification, which is an epigenetic modification mechanism jointly regulated by histone acetyltransferase and histone deacetylase...
April 18, 2024: Zhonghua Kou Qiang Yi Xue za Zhi, Zhonghua Kouqiang Yixue Zazhi, Chinese Journal of Stomatology
https://read.qxmd.com/read/38630408/%C3%AE-indole-3-acetic-acid-attenuated-collagen-induced-arthritis-through-reducing-the-ubiquitination-of-foxp3-via-the-ahr-taz-tip60-pathway
#9
JOURNAL ARTICLE
Xiaoran Su, Xinliu Wang, Xin Zhang, Yajie Sun, Yugai Jia
Massive evidence shows that intestinal tryptophan metabolites affected by intestinal flora can modulate the progression of rheumatoid arthritis (RA). However, the effects and mechanisms of intestinal tryptophan metabolites on RA are not yet detailed. Herein, we investigated the protective effects of intestinal tryptophan metabolites on RA and its detailed mechanisms. In this study, the collagen-induced arthritis (CIA) rat model was established. Based on metabolomics analysis, the contents of β-indole-3-acetic acid (IAA), indolylpropionic acid, and indole-3-β-acrylic acid in the sera of CIA rats were significantly less compared with those of the normal rats...
April 17, 2024: Immunologic Research
https://read.qxmd.com/read/38617985/kat7-hmgn1-signaling-epigenetically-induces-tyrosine-phosphorylation-regulated-kinase-1a-expression-to-ameliorate-insulin-resistance-in-alzheimer-s-disease
#10
JOURNAL ARTICLE
Qun-Shan Lu, Lin Ma, Wen-Jing Jiang, Xing-Bang Wang, Mei Lu
BACKGROUND: Epidemiological studies have revealed a correlation between Alzheimer's disease (AD) and type 2 diabetes mellitus (T2D). Insulin resistance in the brain is a common feature in patients with T2D and AD. KAT7 is a histone acetyltransferase that participates in the modulation of various genes. AIM: To determine the effects of KAT7 on insulin patients with AD. METHODS: APPswe/PS1-dE9 double-transgenic and db/db mice were used to mimic AD and diabetes, respectively...
March 19, 2024: World Journal of Psychiatry
https://read.qxmd.com/read/38617289/flame-retardant-tetrabromobisphenol-a-tbbpa-disrupts-histone-acetylation-during-zebrafish-maternal-to-zygotic-transition
#11
Rosemaria Serradimigni, Alfredo Rojas, Connor Leong, Uttam Pal, Madeline Bryan, Sunil Sharma, Subham Dasgupta
3,3',5.5'-Tetrabromobisphenol A (TBBPA) is a widely used brominated flame-retardant utilized in the production of electronic devices and plastic paints. The objective of this study is to use zebrafish as a model and determine the effects of TBBPA exposure on early embryogenesis. We initiated TBBPA exposures (0, 10, 20 and 40μM) at 0.75 h post fertilization (hpf) and monitored early developmental events such as cleavage, blastula and epiboly that encompass maternal-to-zygotic transition (MZT) and zygotic genome activation (ZGA)...
April 1, 2024: bioRxiv
https://read.qxmd.com/read/38617258/rapid-profiling-of-transcription-factor-cofactor-interaction-networks-reveals-principles-of-epigenetic-regulation
#12
M M Inge, R Miller, H Hook, D Bray, J L Keenan, R Zhao, T D Gilmore, T Siggers
Transcription factor (TF)-cofactor (COF) interactions define dynamic, cell-specific networks that govern gene expression; however, these networks are understudied due to a lack of methods for high-throughput profiling of DNA-bound TF-COF complexes. Here we describe the Co factor Rec ruitment (CoRec) method for rapid profiling of cell-specific TF-COF complexes. We define a lysine acetyltransferase (KAT)-TF network in resting and stimulated T cells. We find promiscuous recruitment of KATs for many TFs and that 35% of KAT-TF interactions are condition specific...
April 6, 2024: bioRxiv
https://read.qxmd.com/read/38613786/activator-of-kat3-histone-acetyltransferase-family-ameliorates-a-neurodevelopmental-disorder-phenotype-in-the-syntaxin-1a-ablated-mouse-model
#13
JOURNAL ARTICLE
Takahiro Nakayama, Akash K Singh, Toshiyuki Fukutomi, Noriyuki Uchida, Yasuo Terao, Hiroki Hamada, Takahiro Muraoka, Eswaramoorthy Muthusamy, Tapas K Kundu, Kimio Akagawa
Syntaxin-1A (stx1a) repression causes a neurodevelopmental disorder phenotype, low latent inhibition (LI) behavior, by disrupting 5-hydroxytryptaminergic (5-HTergic) systems. Herein, we discovered that lysine acetyltransferase (KAT) 3B increases stx1a neuronal transcription and TTK21, a KAT3 activator, induces stx1a transcription and 5-HT release in vitro. Furthermore, glucose-derived CSP-TTK21 could restore decreased stx1a expression, 5-HTergic systems in the brain, and low LI in stx1a (+/-) mice by crossing the blood-brain barrier, whereas the KAT3 inhibitor suppresses stx1a expression, 5-HTergic systems, and LI behaviors in wild-type mice...
April 11, 2024: Cell Reports
https://read.qxmd.com/read/38611033/functional-classification-of-fusion-proteins-in-sarcoma
#14
REVIEW
Marco Wachtel, Didier Surdez, Thomas G P Grünewald, Beat W Schäfer
Sarcomas comprise a heterogeneous group of malignant tumors of mesenchymal origin. More than 80 entities are associated with different mesenchymal lineages. Sarcomas with fibroblastic, muscle, bone, vascular, adipocytic, and other characteristics are distinguished. Nearly half of all entities contain specific chromosomal translocations that give rise to fusion proteins. These are mostly pathognomonic, and their detection by various molecular techniques supports histopathologic classification. Moreover, the fusion proteins act as oncogenic drivers, and their blockade represents a promising therapeutic approach...
March 29, 2024: Cancers
https://read.qxmd.com/read/38604299/discovery-of-novel-nucleoside-derivatives-as-selective-lysine-acetyltransferase-p300-inhibitors-for-cancer-therapy
#15
JOURNAL ARTICLE
Qiuzi Dai, Zigao Yuan, Qinsheng Sun, Zhuolin Ao, Binsheng He, Yuyang Jiang
P300 and CBP are two closely related histone acetyltransferases that are important transcriptional coactivators of many cellular processes. Inhibition of the transcriptional regulator p300/CBP is a promising therapeutic approach in oncology. However, there are no reported single selective p300 or CBP inhibitors to date. In this study, we designed and optimized a series of lysine acetyltransferase p300 selective inhibitors bearing a nucleoside scaffold. Most compounds showed excellent inhibitory activity against p300 with IC50 ranging from 0...
April 9, 2024: Bioorganic & Medicinal Chemistry Letters
https://read.qxmd.com/read/38601626/hbo1-kat7-myst2-hat-complex-regulates-human-adenovirus-replicative-cycle
#16
JOURNAL ARTICLE
Heba Kamel, Varsha Shete, Sayikrushna Gadamsetty, Drayson Graves, Scott Bachus, Nikolas Akkerman, Peter Pelka, Bayar Thimmapaya
Human adenoviruses (HAdV) belong to a small DNA tumor virus family that continues as valuable models in understanding the viral strategies of usurping cell growth regulation. A number of HAdV type 2/5 early viral gene products interact with a variety of cellular proteins to build a conducive environment that promotes viral replication. Here we show that HBO1 (Histone Acetyltransferase Binding to ORC1), a member of the MYST histone acetyltransferase (HAT) complex (also known as KAT7 and MYST2) that acetylates most of the histone H3 lysine 14, is essential for HAdV5 growth...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38593918/kat7-enhances-the-proliferation-and-metastasis-of-head-and-neck-squamous-carcinoma-by-promoting-the-acetylation-level-of-ldha
#17
JOURNAL ARTICLE
Ying Lu, Yong Wang, Leilei Zhang, Zhaofeng Ma, Kaitao Yu, Yao Shu, Xuan Zou, Jinjin Yang, Xin Liu, Chenglong Wang, Yimeng Du, Qihong Li
Lysine acetyltransferase 7 (KAT7), a histone acetyltransferase, has recently been identified as an oncoprotein and has been implicated in the development of various malignancies. However, its specific role in head and neck squamous carcinoma (HNSCC) has not been fully elucidated. Our study revealed that high expression of KAT7 in HNSCC patients is associated with poor survival prognosis and silencing KAT7 inhibits the Warburg effect, leading to reduced proliferation, invasion, and metastatic potential of HNSCC...
April 7, 2024: Cancer Letters
https://read.qxmd.com/read/38590032/broadening-the-ocular-phenotypic-spectrum-of-ultra-rare-brpf1-variants-report-of-two-cases
#18
JOURNAL ARTICLE
Elisa Marziali, Samuela Landini, Erika Fiorentini, Camilla Rocca, Lucia Tiberi, Rosangela Artuso, Laila Zaroili, Elia Dirupo, Pina Fortunato, Sara Bargiacchi, Roberto Caputo, Giacomo Maria Bacci
INTRODUCTION: BRPF1 gene on 3p26-p25 encodes a protein involved in epigenetic regulation, through interaction with histone H3 lysine acetyltransferases KAT6A and KAT6B of the MYST family. Heterozygous pathogenic variants in BRPF1 gene are associated with Intellectual Developmental Disorder with Dysmorphic Facies and Ptosis (IDDDFP), characterized by global developmental delay, intellectual disability, language delay, and dysmorphic facial features. The reported ocular involvement includes strabismus, amblyopia, and refraction errors...
April 8, 2024: Ophthalmic Genetics
https://read.qxmd.com/read/38587698/hat-and-hdac-enzyme-with-contradictory-action-in-neurodegenerative-diseases
#19
REVIEW
Richa Singh, Aaina Singh Rathore, Hagera Dilnashin, Priyanka Kumari Keshri, Nitesh Kumar Gupta, Singh Ankit Satya Prakash, Walia Zahra, Shekhar Singh, Surya Pratap Singh
In view of the increasing risk of neurodegenerative diseases, epigenetics plays a fundamental role in the field of neuroscience. Several modifications have been studied including DNA methylation, histone acetylation, histone phosphorylation, etc. Histone acetylation and deacetylation regulate gene expression, and the regular activity of histone acetyltransferases (HATs) and histone deacetylases (HDACs) provides regulatory stages for gene expression and cell cycle. Imbalanced homeostasis in these enzymes causes a detrimental effect on neurophysiological function...
April 8, 2024: Molecular Neurobiology
https://read.qxmd.com/read/38586029/p300-cbp-degradation-is-required-to-disable-the-active-ar-enhanceosome-in-prostate-cancer
#20
Jie Luo, Zhixiang Chen, Yuanyuan Qiao, Jean Ching-Yi Tien, Eleanor Young, Rahul Mannan, Somnath Mahapatra, Tongchen He, Sanjana Eyunni, Yuping Zhang, Yang Zheng, Fengyun Su, Xuhong Cao, Rui Wang, Yunhui Cheng, Rithvik Seri, James George, Miriam Shahine, Stephanie J Miner, Ulka Vaishampayan, Mi Wang, Shaomeng Wang, Abhijit Parolia, Arul M Chinnaiyan
Prostate cancer is an exemplar of an enhancer-binding transcription factor-driven disease. The androgen receptor (AR) enhanceosome complex comprised of chromatin and epigenetic coregulators assembles at enhancer elements to drive disease progression. The paralog lysine acetyltransferases p300 and CBP deposit histone marks that are associated with enhancer activation. Here, we demonstrate that p300/CBP are determinant cofactors of the active AR enhanceosome in prostate cancer. Histone H2B N-terminus multisite lysine acetylation (H2BNTac), which was exclusively reliant on p300/CBP catalytic function, marked active enhancers and was notably elevated in prostate cancer lesions relative to the adjacent benign epithelia...
March 30, 2024: bioRxiv
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