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https://www.readbyqxmd.com/read/28817629/maldi-tof-ms-identification-of-anopheles-gambiae-giles-blood-meal-crushed-on-whatman-filter-papers
#1
Sirama Niare, Lionel Almeras, Fatalmoudou Tandina, Amina Yssouf, Affane Bacar, Ali Toilibou, Ogobara Doumbo, Didier Raoult, Philippe Parola
BACKGROUND: Identification of the source of mosquito blood meals is an important component for disease control and surveillance. Recently, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) profiling has emerged as an effective tool for mosquito blood meal identification, using the abdomens of freshly engorged mosquitoes. In the field, mosquito abdomens are crushed on Whatman filter papers to determine the host feeding patterns by identifying the origin of their blood meals...
2017: PloS One
https://www.readbyqxmd.com/read/28817618/national-scale-cropland-mapping-based-on-spectral-temporal-features-and-outdated-land-cover-information
#2
François Waldner, Matthew C Hansen, Peter V Potapov, Fabian Löw, Terence Newby, Stefanus Ferreira, Pierre Defourny
The lack of sufficient ground truth data has always constrained supervised learning, thereby hindering the generation of up-to-date satellite-derived thematic maps. This is all the more true for those applications requiring frequent updates over large areas such as cropland mapping. Therefore, we present a method enabling the automated production of spatially consistent cropland maps at the national scale, based on spectral-temporal features and outdated land cover information. Following an unsupervised approach, this method extracts reliable calibration pixels based on their labels in the outdated map and their spectral signatures...
2017: PloS One
https://www.readbyqxmd.com/read/28816806/autologous-blood-transfusion-for-postpartum-hemorrhage
#3
Julia A Greenawalt, Denise Zernell
Postpartum hemorrhage (PPH) is a leading contributor to maternal morbidity and mortality in the United States and globally. Although the rate of PPH is generally decreasing nationally, severity of PPH appears to be increasing, potentially related to the various comorbidities associated with women of childbearing age. There is increasing evidence of risks associated with allogeneic blood transfusion, which has historically been the classic therapeutic approach for treatment to PPH. Pregnant women are particularly susceptible to the implications of sensitization to red cell antigens, a common sequela to allogenic blood transfusion...
September 2017: MCN. the American Journal of Maternal Child Nursing
https://www.readbyqxmd.com/read/28816670/colorization-using-neural-network-ensemble
#4
Zezhou Cheng, Qingxiong Yang, Bin Sheng
This paper investigates into the colorization problem which converts a grayscale image to a colorful version. This is a difficult problem and normally requires manual adjustment to achieve artifact-free quality. For instance, it normally requires human-labelled color scribbles on the grayscale target image or a careful selection of colorful reference images. The recent learning-based colorization techniques automatically colorize a grayscale image using a single neural network. Since different scenes usually have distinct color styles, it is difficult to accurately capture the color characteristics using a single neural network...
August 16, 2017: IEEE Transactions on Image Processing: a Publication of the IEEE Signal Processing Society
https://www.readbyqxmd.com/read/28816662/distortion-aware-correlation-tracking
#5
Hanhui Li, Hefeng Wu, Huifang Zhang, Shujin Lin, Xiaonan Luo, Ruomei Wang
Recently, correlation filter (CF) based tracking methods have attracted considerable attention because of their high-speed performance. However, distortion, which refers to the phenomenon that the correlation outputs of CF based trackers are distorted, remains a major obstacle for these methods. In this paper, we propose a Distortion-Aware Correlation Filter (DACF) framework, which can detect distortions and recover from tracking failures. Our framework employs a simple yet effective feature termed normed correlation response to detect distortions...
August 14, 2017: IEEE Transactions on Image Processing: a Publication of the IEEE Signal Processing Society
https://www.readbyqxmd.com/read/28816657/a-dynamic-regression-approach-for-frequency-domain-partial-coherence-and-causality-analysis-of-functional-brain-networks
#6
Lipeng Ning, Yogesh Rathi
Coherence and causality measures are often used to analyze the influence of one region on another during analysis of functional brain networks. The analysis methods usually involve a regression problem where the signal of interest is decomposed into a mixture of regressor and a residual signal. In this paper, we revisit this basic problem and present solutions that provide the minimal-entropy residuals for different types of regression filters, such as causal, instantaneously causal and noncausal filters. Using optimal prediction theory, we derive several novel frequency-domain expressions for partial coherence, causality and conditional causality analysis...
August 14, 2017: IEEE Transactions on Medical Imaging
https://www.readbyqxmd.com/read/28816463/signaling-related-mobility-changes-in-bacterial-chemotaxis-receptors-revealed-by-solid-state-nmr
#7
Maryam Kashefi, Lynmarie K Thompson
Bacteria employ remarkable membrane-bound nanoarrays to sense their environment and direct their swimming. Arrays consist of chemotaxis receptor trimers of dimers that are bridged at their membrane-distal tips by rings of two cytoplasmic proteins, a kinase CheA and a coupling protein CheW. It is not clear how ligand binding to the periplasmic domain of the receptor deactivates the CheA kinase bound to the cytoplasmic tip ~300 Å away, but the mechanism is thought to involve changes in dynamics within the cytoplasmic domain...
August 17, 2017: Journal of Physical Chemistry. B
https://www.readbyqxmd.com/read/28816397/a-flow-through-column-electrolytic-cell-for-supercritical-fluid-chromatography
#8
Kazuhiro Yamamoto, Tatsuya Ueki, Naoyuki Higuchi, Kouji Takahashi, Akira Kotani, Hideki Hakamata
A novel flow-through column electrolytic cell was proposed as a detector to obtain current signals for supercritical fluid chromatography. The electrochemical cell consisted of two electrodes and its holder, and a working and a counter electrode were fabricated from 192 carbon strings, which were composed of 400 carbon fibers of 10 μm in diameter filled into a heat-shrinkable tube. These electrodes were placed in the center of a holder made from polyether ether ketone blocks and they were separated by polytetrafluoroethylene membrane filters...
August 17, 2017: Journal of Separation Science
https://www.readbyqxmd.com/read/28816299/-application-of-intraoperative-cell-salvage-combined-with-leukocyte-depletion-filter-on-radical-nephrectomy-for-renal-carcinoma-with-inferior-vena-cava-tumor-thrombus-2-case-reports
#9
H Zeng, X Y Rong, X Q Zhang, X Y Guo
Intraoperative cell salvage (IOCS) has been widely used to reduce allogeneic blood transfusion and prevent blood transfusion related complications during surgery. However, due to the risk of transfusion related reaction, contamination, and immunological reaction, its use for tumor patients has been controversial and limited. To explore the feasibility of the application of IOCS in cancer patients, we reported 2 cases of renal cell carcinoma (RCC) with tumor embolism in IVC that underwent radical nephrectomy,and inferior caval venous thrombectomy receiving IOCS combined with leukocyte depletion filter (LDF) from August 2016 to November 2016 in our hospital...
August 18, 2017: Beijing da Xue Xue Bao. Yi Xue Ban, Journal of Peking University. Health Sciences
https://www.readbyqxmd.com/read/28816067/post-acquisition-data-mining-techniques-for-lc-ms-ms-acquired-data-in-drug-metabolite-identification
#10
Pooja Sukhdev Dhurjad, Vamsi Krishna Marothu, Rajeshwari Rathod
Metabolite identification is a crucial part of the drug discovery process. LC-MS/MS-based metabolite identification has gained widespread use, but the data acquired by the LC-MS/MS instrument is complex, and thus the interpretation of data becomes troublesome. Fortunately, advancements in data mining techniques have simplified the process of data interpretation with improved mass accuracy and provide a potentially selective, sensitive, accurate and comprehensive way for metabolite identification. In this review, we have discussed the targeted (extracted ion chromatogram, mass defect filter, product ion filter, neutral loss filter and isotope pattern filter) and untargeted (control sample comparison, background subtraction and metabolomic approaches) post-acquisition data mining techniques, which facilitate the drug metabolite identification...
August 17, 2017: Bioanalysis
https://www.readbyqxmd.com/read/28815925/the-effects-of-hydropeaking-on-riverine-plants-a-review
#11
María D Bejarano, Roland Jansson, Christer Nilsson
Hydropeaking refers to frequent, rapid and short-term fluctuations in water flow and water levels downstream and upstream of hydropower stations. Such fluctuations are becoming increasingly common worldwide and are known to have far-reaching effects on riverine vegetation. Novel hydrology caused by hydropeaking has no natural correspondence in freshwater systems, and hence few species have adaptations to all its aspects. Here, we review the literature on hydropeaking effects on riverine plants and define the state of the information on this human alteration of riverine ecosystems...
August 17, 2017: Biological Reviews of the Cambridge Philosophical Society
https://www.readbyqxmd.com/read/28815839/circulating-tumor-cells-in-patients-with-head-and-neck-squamous-cell-carcinoma-feasibility-of-detection-and-quantitation
#12
Tomoyuki Kawada, Hideyuki Takahashi, Koichi Sakakura, Shota Ida, Ikko Mito, Minoru Toyoda, Kazuaki Chikamatsu
BACKGROUND: The purpose of this study was to present our findings that because circulating tumor cells (CTCs) exist in extremely low numbers, their detection and quantification are challenging. METHODS: Peripheral blood samples were collected from 32 patients with head and neck squamous cell carcinoma (HNSCC), and were subjected to the CellSieve Microfiltration Assay using a low-pressure filtration system. The CTCs captured by the filter were stained with an antibody cocktail (anti-cytokeratin (CK) 8, 18, and 19, anti-epithelial cell adhesion molecule (EpCAM), and anti-CD45 antibodies)...
August 17, 2017: Head & Neck
https://www.readbyqxmd.com/read/28815487/benzophenone-3-impairs-autophagy-alters-epigenetic-status-and-disrupts-retinoid-x-receptor-signaling-in-apoptotic-neuronal-cells
#13
Agnieszka Wnuk, Joanna Rzemieniec, Władysław Lasoń, Wojciech Krzeptowski, Małgorzata Kajta
Benzophenone-3 (BP-3) is the most widely used compound among UV filters for the prevention of photodegradation. Population studies have demonstrated that it penetrates through the skin and crosses the blood-brain barrier. However, little is known about the impact of BP-3 on the nervous system and its possible adverse effects on the developing brain. We demonstrated that the neurotoxic effects of BP-3 were accompanied by the induction of apoptosis, as evidenced by apoptosis-related caspase-3 activation and apoptotic body formation as well as the inhibition of autophagy, as determined by the downregulation of autophagy-related genes, decreased autophagosome formation, and reduced LC3B-to-LC3A ratio...
August 16, 2017: Molecular Neurobiology
https://www.readbyqxmd.com/read/28815377/bacterial-community-structures-in-air-conditioners-installed-in-japanese-residential-buildings
#14
Kouta Hatayama, Yurika Oikawa, Hiroyuki Ito
The bacterial community structures in four Japanese split-type air conditioners were analyzed using a next-generation sequencer. A variety of bacteria were detected in the air filter of an air conditioner installed on the first floor. In the evaporator of this air conditioner, bacteria belonging to the genus Methylobacterium, or the family of Sphingomonadaceae, were predominantly detected. On the other hand, the majority of bacteria detected in the air filters and evaporators of air conditioners installed on the fifth and twelfth floors belonged to the family Enterobacteriaceae...
August 16, 2017: Antonie Van Leeuwenhoek
https://www.readbyqxmd.com/read/28815369/suspended-particulate-matter-collection-methods-influence-the-quantification-of-polycyclic-aromatic-compounds-in-the-river-system
#15
Fayez Abuhelou, Laurence Mansuy-Huault, Catherine Lorgeoux, Delphine Catteloin, Valéry Collin, Allan Bauer, Hussein Jaafar Kanbar, Renaud Gley, Luc Manceau, Fabien Thomas, Emmanuelle Montargès-Pelletier
In this study, we compared the influence of two different collection methods, filtration (FT) and continuous flow field centrifugation (CFC), on the concentration and the distribution of polycyclic aromatic compounds (PACs) in suspended particulate matter (SPM) occurring in river waters. SPM samples were collected simultaneously with FT and CFC from a river during six sampling campaigns over 2 years, covering different hydrological contexts. SPM samples were analyzed to determine the concentration of PACs including 16 polycyclic aromatic hydrocarbons (PAHs), 11 oxygenated PACs (O-PACs), and 5 nitrogen PACs (N-PACs)...
August 16, 2017: Environmental Science and Pollution Research International
https://www.readbyqxmd.com/read/28815314/a-comparative-study-on-macro-and-microelement-bioaccumulation-properties-of-leaves-and-bark-of-quercus-petraea-and-pinus-sylvestris
#16
Agnieszka Klink, Ludmiła Polechońska, Małgorzata Dambiec, Kamila Białas
Trees are widely used for biomonitoring and filtering air in industrial, urban, and rural areas. This research was undertaken to examine accumulation capacities of macroelements (Ca, K, Mg, Na) and trace metals (As, Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, Zn) in needles and bark of Pinus sylvestris and leaves and bark of Quercus petraea growing in the vicinity of the chlor-alkali plant PCC Rokita in Brzeg Dolny (Lower Silesia, SW Poland). Because Scots pine is well studied and considered a useful bioindicator, we have used this species as a base for comparison of the accumulation ability of sessile oak that shows some features of good bioindicator, but whose biogeochemistry was scarcely studied...
August 16, 2017: Archives of Environmental Contamination and Toxicology
https://www.readbyqxmd.com/read/28814967/kalman-filtering-for-genetic-regulatory-networks-with-missing-values
#17
Qiongbin Lin, Qiuhua Liu, Tianyue Lai, Wu Wang
The filter problem with missing value for genetic regulation networks (GRNs) is addressed, in which the noises exist in both the state dynamics and measurement equations; furthermore, the correlation between process noise and measurement noise is also taken into consideration. In order to deal with the filter problem, a class of discrete-time GRNs with missing value, noise correlation, and time delays is established. Then a new observation model is proposed to decrease the adverse effect caused by the missing value and to decouple the correlation between process noise and measurement noise in theory...
2017: Computational and Mathematical Methods in Medicine
https://www.readbyqxmd.com/read/28814776/continuously-wavelength-tunable-passband-flattened-fiber-comb-filter-based-on-polarization-diversified-loop-structure
#18
Jaehoon Jung, Yong Wook Lee
Continuous wavelength tuning of optical comb filters, which is an essential functionality for flexible signal processing in reconfigurable optical systems, has been challenging in high order filter structures with two birefringent elements (BEs) or more due to cumbersomeness in finding a combination of waveplates and BEs and complexity in determining their individual azimuthal orientations. Here, we propose a continuously tunable polarization-independent passband-flattened fiber comb filter with two BEs using a polarization-diversified loop structure for the first time...
August 16, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28814668/injury-induced-actin-cytoskeleton-reorganization-in-podocytes-revealed-by-super-resolution-microscopy
#19
Hani Y Suleiman, Robyn Roth, Sanjay Jain, John E Heuser, Andrey S Shaw, Jeffrey H Miner
The architectural integrity of tissues requires complex interactions, both between cells and between cells and the extracellular matrix. Fundamental to cell and tissue homeostasis are the specific mechanical forces conveyed by the actomyosin cytoskeleton. Here we used super-resolution imaging methods to visualize the actin cytoskeleton in the kidney glomerulus, an organized collection of capillaries that filters the blood to make the primary urine. Our analysis of both mouse and human glomeruli reveals a network of myosin IIA-containing contractile actin cables within podocyte cell bodies and major processes at the outer aspects of the glomerular tuft...
August 17, 2017: JCI Insight
https://www.readbyqxmd.com/read/28814081/monitoring-genetic-population-biomarkers-with-wastewater-based-epidemiology
#20
Zhugen Yang, Gaolian Xu, Julien Reboud, Barbara Kasprzyk-Hordern, Jonathan Mark Cooper
We report a rapid "sample-to-answer" platform for the quantitative monitoring of genetic biomarkers within communities by analysis of wastewater. The assay is based on the loop-mediated isothermal amplification (LAMP) and shows for the first time the ability to rapidly quantify human-specific mitochondrial DNA (mtDNA) from raw untreated wastewater samples. mtDNA provides a model population biomarker associated with carcinogenesis including breast, renal and gastric cancers. We integrated a filter to remove solid impurities and perform DNA extraction and enrichment in a low cost lateral flow-based test...
August 17, 2017: Analytical Chemistry
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