keyword
https://read.qxmd.com/read/38627394/an-optoacoustic-field-programmable-perceptron-for-recurrent-neural-networks
#1
JOURNAL ARTICLE
Steven Becker, Dirk Englund, Birgit Stiller
Recurrent neural networks (RNNs) can process contextual information such as time series signals and language. But their tracking of internal states is a limiting factor, motivating research on analog implementations in photonics. While photonic unidirectional feedforward neural networks (NNs) have demonstrated big leaps, bi-directional optical RNNs present a challenge: the need for a short-term memory that (i) programmable and coherently computes optical inputs, (ii) minimizes added noise, and (iii) allows scalability...
April 16, 2024: Nature Communications
https://read.qxmd.com/read/38626504/a-delayed-decoupling-methyl-trosy-pulse-sequence-for-atomic-resolution-studies-of-folded-proteins-and-rnas-in-condensates
#2
JOURNAL ARTICLE
Rashik Ahmed, Atul K Rangadurai, Lisa Ruetz, Martin Tollinger, Christoph Kreutz, Lewis E Kay
Solution NMR spectroscopy has tremendous potential for providing atomic resolution insights into the interactions between proteins and nucleic acids partitioned into condensed phases of phase-separated systems. However, the highly viscous nature of the condensed phase challenges applications, and in particular, the extraction of quantitative, site-specific information. Here, we present a delayed decoupling-based HMQC pulse sequence for methyl-TROSY studies of 'client' proteins and nucleic acids partitioned into 'scaffold' proteinaceous phase-separated solvents...
March 28, 2024: Journal of Magnetic Resonance
https://read.qxmd.com/read/38621069/generation-of-high-energy-sub-20%C3%A2-fs-deep-uv-pulses-in-a-twin-crystal-third-harmonic-generation-scheme
#3
JOURNAL ARTICLE
Peter Susnjar, Gabor Kurdi, Paolo Cinquegrana, Alexander Demidovich, Ivaylo Nikolov, Paolo Sigalotti, Miltcho B Danailov
Ultrashort deep ultraviolet (DUV) pulses serve as indispensable tools for investigating molecular dynamics on the femtosecond scale. Nonlinear frequency upconversion of near-infrared (NIR) light sources in a sequence of nonlinear crystals is a common method for their generation. However, preserving the temporal duration of the starting source encounters challenges owing to phase-matching bandwidth limitations within the harmonic generation process. Here we propose an approach for circumventing this limitation and demonstrate it for the case of generation of the third harmonic of 800 nm pulses in a two-stage scheme (second harmonic generation succeeded by sum-frequency mixing of the fundamental and second harmonic pulses)...
April 15, 2024: Optics Letters
https://read.qxmd.com/read/38619985/enhancing-cerebral-amyloid-angiopathy-related-inflammation-diagnosis-with-pet-using-pittsburgh-compound-b
#4
JOURNAL ARTICLE
Shinobu Adaniya, Hiroshi Matsuda, Masaki Tomori, Chikako Kaneko, Noriaki Tomura
Cerebral amyloid angiopathy-related inflammation is a rare encephalopathy characterized by inflammation against amyloid protein accumulated in cerebral small vessels. A 50-year-old man was presented with a subacute consciousness disorder. Brain MRI revealed high intensity lesions in the white matter of the right parietal and occipital lobes on fluid-attenuated inversion recovery sequences and cerebral microbleeds in the right parietal and occipital lobes on T2*-weighted images. Pittsburgh compound B-PET demonstrated accumulation in the right temporoparietal lobe, confirming a potential diagnosis of probable cerebral amyloid angiopathy-related inflammation without brain biopsy...
April 12, 2024: Clinical Nuclear Medicine
https://read.qxmd.com/read/38619932/two-dimensional-fourier-transform-ion-cyclotron-resonance-mass-spectrometry-by-matrix-assisted-laser-desorption-ionization
#5
JOURNAL ARTICLE
Richard J Bell, David S Hage, Eric D Dodds
Two-dimensional Fourier transform ion cyclotron resonance (2D FTICR) mass spectrometry is a developing form of data-independent acquisition that allows for the simultaneous fragmentation and correlation of fragment ions to their precursors across a range of m / z values. The modern usage of 2D FTICR is performed using electrospray ionization (ESI) as the dried droplet preparation for matrix-assisted laser desorption ionization (MALDI) does not produce a consistent packet of ions over a number of scans. This work uses pneumatic spray techniques from mass spectrometry imaging to create a homogeneous surface for use with MALDI as an ionization source for 2D FTICR...
April 15, 2024: Analytical Chemistry
https://read.qxmd.com/read/38619716/a-machine-learning-algorithm-for-detecting-abnormal-patterns-in-continuous-capnography-and-pulse-oximetry-monitoring
#6
JOURNAL ARTICLE
Feline L Spijkerboer, Frank J Overdyk, Albert Dahan
Continuous capnography monitors patient ventilation but can be susceptible to artifact, resulting in alarm fatigue. Development of smart algorithms may facilitate accurate detection of abnormal ventilation, allowing intervention before patient deterioration. The objective of this analysis was to use machine learning (ML) to classify combined waveforms of continuous capnography and pulse oximetry as normal or abnormal. We used data collected during the observational, prospective PRODIGY trial, in which patients receiving parenteral opioids underwent continuous capnography and pulse oximetry monitoring while on the general care floor [1]...
April 15, 2024: Journal of Clinical Monitoring and Computing
https://read.qxmd.com/read/38617145/accelerated-four-dimensional-free-breathing-whole-liver-water-fat-magnetic-resonance-imaging-with-deep-dictionary-learning-and-chemical-shift-modeling
#7
JOURNAL ARTICLE
Shuo Li, Zhijun Wang, Zekang Ding, Huajun She, Yiping P Du
BACKGROUND: Multi-echo chemical-shift-encoded magnetic resonance imaging (MRI) has been widely used for fat quantification and fat suppression in clinical liver examinations. Clinical liver water-fat imaging typically requires breath-hold acquisitions, with the free-breathing acquisition method being more desirable for patient comfort. However, the acquisition for free-breathing imaging could take up to several minutes. The purpose of this study is to accelerate four-dimensional free-breathing whole-liver water-fat MRI by jointly using high-dimensional deep dictionary learning and model-guided (MG) reconstruction...
April 3, 2024: Quantitative Imaging in Medicine and Surgery
https://read.qxmd.com/read/38617143/high-angular-resolution-diffusion-imaging-hardi-of-porcine-menisci-a-comparison-of-diffusion-tensor-imaging-and-generalized-q-sampling-imaging
#8
JOURNAL ARTICLE
Qi Zhao, Abigail Holt, Charles E Spritzer, Louis E DeFrate, Amy L McNulty, Nian Wang
BACKGROUND: Diffusion magnetic resonance imaging (MRI) allows for the quantification of water diffusion properties in soft tissues. The goal of this study was to characterize the 3D collagen fiber network in the porcine meniscus using high angular resolution diffusion imaging (HARDI) acquisition with both diffusion tensor imaging (DTI) and generalized q-sampling imaging (GQI). METHODS: Porcine menisci (n=7) were scanned ex vivo using a three-dimensional (3D) HARDI spin-echo pulse sequence with an isotropic resolution of 500 µm at 7...
April 3, 2024: Quantitative Imaging in Medicine and Surgery
https://read.qxmd.com/read/38615456/an-ultrasensitive-genosensor-for-detection-of-toxigenic-and-non-toxigenic-clostridioides-difficile-based-on-a-conserved-sequence-in-surface-layer-protein-coding-gene
#9
JOURNAL ARTICLE
Sepideh Ziaei Chamgordani, Abbas Yadegar, Masoumeh Azimirad, Hedayatollah Ghourchian
Clostridioides difficile (C. difficile) is the most common agent of antibiotic-associated diarrhea, leading to intestinal infection through the secretion of two major toxins. Not all strains of this bacterium are toxigenic, but some of them cause infection via their accessory virulence factors, such as surface layer protein (SlpA). SlpA is conserved in both toxigenic and non-toxigenic strains of C. difficile. In the present work, an amplification-free electrochemical genosensor was designed for the detection of the slpA gene...
April 13, 2024: Talanta
https://read.qxmd.com/read/38614223/amide-proton-transfer-weighted-imaging-with-a-short-acquisition-time-based-on-a-self-b0-correction-using-the-turbo-spin-echo-dixon-method-a-phantom-study
#10
JOURNAL ARTICLE
Chiaki Tokunaga, Tatsuhiro Wada, Osamu Togao, Kouji Kobayashi, Toyoyuki Kato
PURPOSE: Conventional amide proton transfer (APT)-weighted imaging requires a chemical exchange saturation transfer (CEST) sequence with multiple saturation frequency offsets and a B0 correction sequence, plus a long acquisition time that can be reduced by applying the conventional method using CEST images with seven radiation pulses (i.e., the seven-points method). For a further reduction of acquisition times, we propose fast two-dimensional (2D) APT-weighted imaging based on a self B0 correction using the turbo spin echo (TSE)-Dixon method...
April 11, 2024: Magnetic Resonance Imaging
https://read.qxmd.com/read/38614057/towards-a-unified-picture-of-polarization-transfer-pulsed-dnp-and-chemically-equivalent-phip
#11
JOURNAL ARTICLE
Martin C Korzeczek, Laurynas Dagys, Christoph Müller, Benedikt Tratzmiller, Alon Salhov, Tim Eichhorn, Jochen Scheuer, Stephan Knecht, Martin B Plenio, Ilai Schwartz
Nuclear spin hyperpolarization techniques, such as dynamic nuclear polarization (DNP) and parahydrogen-induced polarization (PHIP), have revolutionized nuclear magnetic resonance and magnetic resonance imaging. In these methods, a readily available source of high spin order, either electron spins in DNP or singlet states in hydrogen for PHIP, is brought into close proximity with nuclear spin targets, enabling efficient transfer of spin order under external quantum control. Despite vast disparities in energy scales and interaction mechanisms between electron spins in DNP and nuclear singlet states in PHIP, a pseudo-spin formalism allows us to establish an intriguing equivalence...
April 12, 2024: Journal of Magnetic Resonance
https://read.qxmd.com/read/38612932/usefulness-and-limitations-of-pfge-diagnosis-and-nucleotide-sequencing-method-in-the-analysis-of-food-poisoning-pathogens-found-in-cooking-employees
#12
JOURNAL ARTICLE
Mi-Na Park, Sang-Gu Yeo, Junhyuk Park, Yoomi Jung, Se-Min Hwang
In the case of a food poisoning outbreak, it is essential to understand the relationship between cooking workers and food poisoning. Many biological diagnostic methods have recently been developed to detect food poisoning pathogens. Among these diagnostic tools, this study presents PCR-based pulsed-field gel electrophoresis and nucleotide sequencing diagnostic analysis results for diagnosing food poisoning outbreaks associated with cooking employees in Chungcheongnam-do, Republic of Korea. Pulsed-field gel electrophoresis was useful in identifying the food poisoning outbreaks caused by Staphylococcus aureus and Enteropathogenic Escherichia coli...
April 8, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38610881/advancements-in-laser-therapies-for-dermal-hyperpigmentation-in-skin-of-color-a-comprehensive-literature-review-and-experience-of-sequential-laser-treatments-in-a-cohort-of-122-indian-patients
#13
REVIEW
Suruchi Garg, Kanya Rani Vashisht, Diksha Garg, Bhavni Oberoi, Geeta Sharma
The heightened awareness of ethnic dermatology aligns with the growing prevalence of skin of color communities globally, where hyperpigmentation disorders pose a common dermatological challenge. Effectively addressing dermal pigmentation is challenging due to its resistance to conventional therapies and its association with impaired quality of life. This underscores the need for effective treatments and a thorough grasp of laser advancements. A relevant literature search spanning the last 7 years across the PubMed database reveals core studies, challenges, and the evolution of laser technologies tailored for various forms of congenital and acquired dermal hyperpigmentation in skin of color...
April 5, 2024: Journal of Clinical Medicine
https://read.qxmd.com/read/38607722/a-radiological-clip-design-using-ultrasound-identification-to-improve-localization
#14
JOURNAL ARTICLE
Jenna Cario, Zhengchang Kou, Rita J Miller, April Dickenson, Christine U Lee, Michael L Oelze
OBJECTIVE: We demonstrate the use of ultrasound to receive an acoustic signal transmitted from a radiological clip designed from a custom circuit. This signal encodes an identification number and is localized and identified wirelessly by the ultrasound imaging system. METHODS: We designed and constructed the test platform with a Teensy 4.0 microcontroller core to detect ultrasonic imaging pulses received by a transducer embedded in a phantom, which acted as the radiological clip...
April 12, 2024: IEEE Transactions on Bio-medical Engineering
https://read.qxmd.com/read/38603921/clean-pdi-1-sq-suppression-of-hsqc-artifacts-in-2d-proton-detected-inadequate-spectra-by-pulse-sequence-redesign
#15
JOURNAL ARTICLE
Justinas Sakas, Dušan Uhrín, Ole W Sørensen
Proton-detected INADEQUATE NMR experiments are widely used for structure elucidation of small molecules, in particular the implementations that display 13 C single-quantum rather than double-quantum frequencies in the indirect dimension of 2D spectra. But unfortunately, such spectra in addition to the desired 1 H-13 C two-bond correlations also contain HSQC artifacts of comparable magnitude. The redesigned versatile experiment presented in this paper requires no compromise based on different 13 C multiplicities and suppresses the HSQC artifacts that are a source of possible spectral misinterpretation...
April 6, 2024: Journal of Magnetic Resonance
https://read.qxmd.com/read/38600654/rosacea-treatment-with-532%C3%A2-nm-ktp-versus-595%C3%A2-nm-pulsed-dye-laser-a-prospective-controlled-study
#16
JOURNAL ARTICLE
Lynhda Nguyen, Cathy Dierckxsens, Martina Kerscher, Anna Hartjen, Stefan W Schneider, Katharina Herberger
BACKGROUND: Pulsed-dye lasers (PDL) are one of the standard therapies for rosacea, but alternatives are needed. AIMS: To compare the efficacy and safety of the variable-sequenced, large-spot 532 nm KTP laser to the 595 nm PDL in treating rosacea. MATERIALS AND METHODS: A prospective, controlled, evaluator-blinded study. Patients were treated with either a KTP or PDL with 1-3 sessions at intervals of 6-8 weeks. A follow-up visit was scheduled on Week 6 post-treatment...
April 10, 2024: Journal of Cosmetic Dermatology
https://read.qxmd.com/read/38594290/bubble-dynamics-and-atomization-of-acoustically-levitated-diesel-and-biodiesel-droplets-using-femtosecond-laser-pulses
#17
JOURNAL ARTICLE
Vishal S Jagadale, Devendra Deshmukh, Dag Hanstorp, Yogeshwar Nath Mishra
This study focuses on the bubble dynamics and associated breakup of individual droplets of diesel and biodiesel under the influence of femtosecond laser pulses. The bubble dynamics were examined by suspending the droplets in the air through an acoustically levitated setup. The laser pulse energies ranged from 25 to 1050 µJ, and droplet diameters varied between 0.25 and 1.5 mm. High-speed shadowgraphy was employed to examine the influence of femtosecond laser intensity and multiple laser pulses on various spatial-temporal parameters...
April 9, 2024: Scientific Reports
https://read.qxmd.com/read/38593383/versatile-nanoscale-three-terminal-memristive-switch-enabled-by-gating
#18
JOURNAL ARTICLE
Mila Lewerenz, Elias Passerini, Bojun Cheng, Markus Fischer, Alexandros Emboras, Mathieu Luisier, Ueli Koch, Juerg Leuthold
A three-terminal memristor with an ultrasmall footprint of only 0.07 μm2 and critical dimensions of 70 nm × 10 nm × 6 nm is introduced. The device's feature is the presence of a gate contact, which enables two operation modes: either tuning the set voltage or directly inducing a resistance change. In I - V mode, we demonstrate that by changing the gate voltages between ±1 V one can shift the set voltage by 69%. In pulsing mode, we show that resistance change can be triggered by a gate pulse...
April 9, 2024: ACS Nano
https://read.qxmd.com/read/38589494/an-ai-based-approach-for-modeling-the-synergy-between-radiotherapy-and-immunotherapy
#19
JOURNAL ARTICLE
Hao Peng, Casey Moore, Yuanyuan Zhang, Debabrata Saha, Steve Jiang, Robert Timmerman
Personalized, ultra-fractionated stereotactic adaptive radiotherapy (PULSAR) is designed to administer tumoricidal doses in a pulsed mode with extended intervals, spanning weeks or months. This approach leverages longer intervals to adapt the treatment plan based on tumor changes and enhance immune-modulated effects. In this investigation, we seek to elucidate the potential synergy between combined PULSAR and PD-L1 blockade immunotherapy using experimental data from a Lewis Lung Carcinoma (LLC) syngeneic murine cancer model...
April 8, 2024: Scientific Reports
https://read.qxmd.com/read/38588678/understanding-the-effects-of-microbubble-concentration-on-localization-accuracy-in-super-resolution-ultrasound-imaging
#20
JOURNAL ARTICLE
Marcelo Lerendegui, Jipeng Yan, Eleanor Stride, Christopher Dunsby, Meng-Xing Tang
Super-Resolution Ultrasound (SRUS) through localising and tracking of Microbubbles (MBs) can achieve sub-wavelength resolution for imaging microvascular structure and flow dynamics in deep tissue in-vivo. The technique assumes that signals from individual MBs can be isolated and localised accurately, but this assumption starts to break down when the MB concentration increases and the signals from neighbouring MBs start to interfere. The aim of this study is to gain understanding of the effect of MB-MB distance on ultrasound images and their localisation...
April 8, 2024: Physics in Medicine and Biology
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