keyword
https://read.qxmd.com/read/38593804/enhancer-switching-in-cell-lineage-priming-is-linked-to-erna-brg1-s-at-hook-and-swi-snf-recruitment
#1
JOURNAL ARTICLE
Dhurjhoti Saha, Srinivas Animireddy, Junwoo Lee, Anna Thommen, McKenzie M Murvin, Yue Lu, J Mauro Calabrese, Blaine Bartholomew
RNA transcribed from enhancers, i.e., eRNA, has been suggested to directly activate transcription by recruiting transcription factors and co-activators. Although there have been specific examples of eRNA functioning in this way, it is not clear how general this may be. We find that the AT-hook of SWI/SNF preferentially binds RNA and, as part of the esBAF complex, associates with eRNA transcribed from intronic and intergenic regions. Our data suggest that SWI/SNF is globally recruited in cis by eRNA to cell-type-specific enhancers, representative of two distinct stages that mimic early mammalian development, and not at enhancers that are shared between the two stages...
April 8, 2024: Molecular Cell
https://read.qxmd.com/read/38509250/different-types-of-pluripotent-stem-cells-represent-different-developmental-stages
#2
JOURNAL ARTICLE
Hisato Kondoh
Pluripotent stem cell lines established from early-stage embryos of mammals or other species represent the embryonic stages before the initiation of somatic development. In these stem cell lines, cell proliferation capacity is maintained while developmental progression is arrested at a specific developmental stage that is determined by the combination of culture conditions, cell state, and species. All of these pluripotent stem cell lines express the transcription factors (TFs) Sox2 and Pou5f1 (Oct3/4); hence, these TFs are often regarded as pluripotency factors...
2024: Results and Problems in Cell Differentiation
https://read.qxmd.com/read/38509249/the-epiblast-and-pluripotent-stem-cell-lines
#3
JOURNAL ARTICLE
Hisato Kondoh
All somatic cells develop from the epiblast, which occupies the upper layer of two-layered embryos and in most mammals is formed after the implantation stage but before gastrulation initiates. Once the epiblast is established, the epiblast cells begin to develop into various somatic cells via large-scale cell reorganization, namely, gastrulation. Different pluripotent stem cell lines representing distinct stages of embryogenesis have been established: mouse embryonic stem cells (mESCs), human embryonic stem cells (hESCs), and mouse epiblast stem cells (EpiSCs), which represent the preimplantation stage inner cell mass, an early  post-implantation stage epiblast, and a later-stage epiblast, respectively...
2024: Results and Problems in Cell Differentiation
https://read.qxmd.com/read/38473927/mir-290-family-maintains-pluripotency-and-self-renewal-by-regulating-mapk-signaling-pathway-in-intermediate-pluripotent-stem-cells
#4
JOURNAL ARTICLE
Yueshi Liu, Xiangnan Li, Xiaozhuang Ma, Qiankun Du, Jiemin Wang, Haiquan Yu
Mouse embryonic stem cells (ESCs) and epiblast stem cells (EpiSCs) are derived from pre- and post-implantation embryos, representing the initial "naïve" and final "primed" states of pluripotency, respectively. In this study, novel reprogrammed pluripotent stem cells (rPSCs) were induced from mouse EpiSCs using a chemically defined medium containing mouse LIF, BMP4, CHIR99021, XAV939, and SB203580. The rPSCs exhibited domed clones and expressed key pluripotency genes, with both X chromosomes active in female cells...
February 26, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38404642/selenomethionine-in-gelatin-methacryloyl-hydrogels-modulating-ferroptosis-to-attenuate-skin-aging
#5
JOURNAL ARTICLE
Jiachen Sun, Xiaoye Xie, Yaoyao Song, Tianjun Sun, Xinzhu Liu, Huageng Yuan, Chuanan Shen
During skin aging, the degeneration of epidermal stem cells (EpiSCs) leads to diminished wound healing capabilities and epidermal disintegration. This study tackles this issue through a comprehensive analysis combining transcriptomics and untargeted metabolomics, revealing age-dependent alterations in the Gpx gene family and arachidonic acid (AA) metabolic networks, resulting in enhanced ferroptosis. Selenomethionine (Se-Met) could enhance GPX4 expression, thereby assisting EpiSCs in countering AA-induced mitochondrial damage and ferroptosis...
May 2024: Bioactive Materials
https://read.qxmd.com/read/37932085/uncovering-phenotypes-in-mutant-mice-by-determining-embryo-organ-tissue-and-cell-developmental-potential
#6
JOURNAL ARTICLE
Virginia E Papaioannou, Richard R Behringer
The death of an embryo during gestation does not necessarily preclude the study of the mutant embryo or the developmental potential of its individual cells, tissues, or organs. Whole-embryo in vitro culture prior to the time of death will allow real-time observation of living embryos and direct comparisons with controls. Organ anlage can be removed from embryos and cultured in vitro beyond the time of death of the whole embryo. In both whole embryos and organ anlage culture, fluorescent protein reporters may be used productively to follow cell types or specific gene expression changes...
November 6, 2023: Cold Spring Harbor Protocols
https://read.qxmd.com/read/37838693/c-jun-as-a-one-way-valve-at-the-naive-to-primed-interface
#7
JOURNAL ARTICLE
Dongwei Li, Ling Luo, Lin Guo, Chuman Wu, Ran Zhang, Yuling Peng, Menghua Wu, Junqi Kuang, Yan Li, Yudan Zhang, Jun Xie, Wenxiu Xie, Rui Mao, Gang Ma, Xiuling Fu, Jiekai Chen, Andrew P Hutchins, Duanqing Pei
BACKGROUND: c-Jun is a proto-oncogene functioning as a transcription factor to activate gene expression under many physiological and pathological conditions, particularly in somatic cells. However, its role in early embryonic development remains unknown. RESULTS: Here, we show that c-Jun acts as a one-way valve to preserve the primed state and impair reversion to the naïve state. c-Jun is induced during the naive to primed transition, and it works to stabilize the chromatin structure and inhibit the reverse transition...
October 14, 2023: Cell & Bioscience
https://read.qxmd.com/read/37838331/epidermal-stem-cell-derived-exosomes-alleviate-excessive-autophagy-induced-endothelial-cell-apoptosis-by-delivering-mir200b-3p-to-diabetic-wounds
#8
JOURNAL ARTICLE
Hailin Xu, Hao Yang, Zhiyong Wang, Qizhi Tang, Xiaoling Cao, Chufen Chen, Yunxian Dong, Zhongye Xu, Dongming Lv, Yanchao Rong, Miao Chen, Bing Tang, Wuguo Deng, Jiayuan Zhu, Zhicheng Hu
The dysfunction of endothelial cells caused by hyperglycaemia is observed as a decrease in neovascularization in diabetic wound healing. Studies have found that epidermal stem cells (EpiSCs) can promote the angiogenesis of full-thickness wounds. To further explain the therapeutic effect of EpiSCs, epidermal stem cell-derived exosomes (EpiSC-EXOs) are considered the main substance contributing to stem cell effectivity. In our study, EpiSCs and EpiSC-EXOs were supplied to the dorsal wounds of db/db mouse. Results showed that EpiSCs could colonize in the wound area and both EpiSCs and EpiSC-EXOs could accelerate diabetic wound healing by promoting angiogenesis...
October 12, 2023: Journal of Investigative Dermatology
https://read.qxmd.com/read/37671016/rat-post-implantation-epiblast-derived-pluripotent-stem-cells-produce-functional-germ-cells
#9
JOURNAL ARTICLE
Kenyu Iwatsuki, Mami Oikawa, Hisato Kobayashi, Christopher A Penfold, Makoto Sanbo, Takuya Yamamoto, Shinichi Hochi, Kazuki Kurimoto, Masumi Hirabayashi, Toshihiro Kobayashi
In mammals, pluripotent cells transit through a continuum of distinct molecular and functional states en route to initiating lineage specification. Capturing pluripotent stem cells (PSCs) mirroring in vivo pluripotent states provides accessible in vitro models to study the pluripotency program and mechanisms underlying lineage restriction. Here, we develop optimal culture conditions to derive and propagate post-implantation epiblast-derived PSCs (EpiSCs) in rats, a valuable model for biomedical research...
August 28, 2023: Cell Rep Methods
https://read.qxmd.com/read/37013936/zbtb7a-regulates-primed-to-na%C3%A3-ve-transition-of-pluripotent-stem-cells-via-recognition-of-the-pnt-associated-sequence-by-zinc-fingers-1-2-and-recognition-of-%C3%AE-globin-200-gene-element-by-zinc-fingers-1-4
#10
JOURNAL ARTICLE
Yang Yang, Lizhan Xiao, Yanting Xue, Mukhtar Oluwaseun Idris, Jing Liu, Duanqing Pei, Yunyu Shi, Baojian Liao, Fudong Li
ZBTB7A, a transcription factor containing a tandem array of four Cys2-His2 zinc fingers (ZFs), is vital for multiple physiological events through directional binding to different genomic loci. Our previously determined crystal structure of ZBTB7A in complex with a GCCCCTTCCCC sequence revealed that all the four ZFs (ZF1-4) are involved in binding to γ-globin -200 gene element to repress fetal hemoglobin expression. Recently, it has been reported that ZBTB7A drives primed-to-naïve transition (PNT) of pluripotent stem cells through binding to a 12-bp consensus sequence ([AAGGACCCAGAT], referred to as PNT associated sequence)...
April 4, 2023: FEBS Journal
https://read.qxmd.com/read/36764461/analysis-of-mir-203a-3p-socs3-mediated-induction-of-m2-macrophage-polarization-to-promote-diabetic-wound-healing-based-on-epidermal-stem-cell-derived-exosomes
#11
JOURNAL ARTICLE
Hao Yang, Hailin Xu, Zhiyong Wang, Xiaohui Li, Peng Wang, Xiaoling Cao, Zhongye Xu, Dongming Lv, Yanchao Rong, Miao Chen, Bing Tang, Zhicheng Hu, Wuguo Deng, Jiayuan Zhu
BACKGROUND: The development of therapeutic strategies to improve wound healing in individual diabetic patients remains challenging. Stem cell-derived exosomes represent a promising nanomaterial, and microRNAs (miRNAs) can be isolated from them. It is important to identify the potential therapeutic role of specific miRNAs, given that miRNAs can play a therapeutic role. METHODS: qPCR, flow cytometry, and western blotting were used to verify the effect of epidermal stem cell-derived exosomes (EpiSC-EXOs) on M2 macrophage polarization and SOCS3 expression...
March 2023: Diabetes Research and Clinical Practice
https://read.qxmd.com/read/36672261/reduced-cell-ecm-interactions-in-the-episc-colony-center-cause-heterogeneous-differentiation
#12
JOURNAL ARTICLE
Kshitij Amar, Sanjoy Saha, Avishek Debnath, Chun Hung Weng, Arpan Roy, Kyu Young Han, Farhan Chowdhury
Mechanoregulation of cell-extracellular matrix (ECM) interactions are crucial for dictating pluripotent stem cell differentiation. However, not all pluripotent cells respond homogeneously which results in heterogeneous cell populations. When cells, such as mouse epiblast stem cells (EpiSCs), are cultured in clusters, the heterogeneity effect during differentiation is even more pronounced. While past studies implicated variations in signaling pathways to be the root cause of heterogeneity, the biophysical aspects of differentiation have not been thoroughly considered...
January 15, 2023: Cells
https://read.qxmd.com/read/36600269/stability-and-biosafety-of-human-epidermal-stem-cell-for-wound-repair-preclinical-evaluation
#13
JOURNAL ARTICLE
Xiaohong Zhao, Xue Li, Ying Wang, Yicheng Guo, Yong Huang, Dalun Lv, Mingxing Lei, Shicang Yu, Gaoxing Luo, Rixing Zhan
BACKGROUND: Cell therapy is a key technology to prevent sacrificing normal skin. Although some studies have shown the promise of human epidermal stem cells (EpiSCs), the efficacy, biosafety and quality control of EpiSC therapy have not been systematically reported. METHODS: The biosafety, stemness maintenance and wound repair of EpiSC were systematically verified by in vitro and in vivo experiments. EpiSC were prepared from the foreskin using a collagen type IV rapid adherence method...
January 5, 2023: Stem Cell Research & Therapy
https://read.qxmd.com/read/35903955/stepwise-pluripotency-transitions-in-mouse-stem-cells
#14
REVIEW
Mitsuhiro Endoh, Hitoshi Niwa
Pluripotent cells in mouse embryos, which first emerge in the inner cell mass of the blastocyst, undergo gradual transition marked by changes in gene expression, developmental potential, polarity, and morphology as they develop from the pre-implantation until post-implantation gastrula stage. Recent studies of cultured mouse pluripotent stem cells (PSCs) have clarified the presence of intermediate pluripotent stages between the naïve pluripotent state represented by embryonic stem cells (ESCs-equivalent to the pre-implantation epiblast) and the primed pluripotent state represented by epiblast stem cells (EpiSCs-equivalent to the late post-implantation gastrula epiblast)...
July 29, 2022: EMBO Reports
https://read.qxmd.com/read/35899604/rapid-and-robust-directed-differentiation-of-mouse-epiblast-stem-cells-into-definitive-endoderm-and-forebrain-organoids
#15
JOURNAL ARTICLE
Daniel Medina-Cano, Emily K Corrigan, Rachel A Glenn, Mohammed T Islam, Yuan Lin, Juliet Kim, Hyunwoo Cho, Thomas Vierbuchen
Directed differentiation of pluripotent stem cells (PSCs) is a powerful model system for deconstructing embryonic development. Although mice are the most advanced mammalian model system for genetic studies of embryonic development, state-of-the-art protocols for directed differentiation of mouse PSCs into defined lineages require additional steps and generates target cell types with lower purity than analogous protocols for human PSCs, limiting their application as models for mechanistic studies of development...
October 15, 2022: Development
https://read.qxmd.com/read/35831949/smchd1-underlies-the-formation-of-h3k9me3-blocks-on-the-inactive-x-chromosome-in-mice
#16
JOURNAL ARTICLE
Saya Ichihara, Koji Nagao, Takehisa Sakaguchi, Chikashi Obuse, Takashi Sado
Stable silencing of the inactive X chromosome (Xi) in female mammals is critical for the development of embryos and their postnatal health. SmcHD1 is essential for stable silencing of the Xi, and its functional deficiency results in derepression of many X-inactivated genes. Although SmcHD1 has been suggested to play an important role in the formation of higher order chromatin structure of the Xi, the underlying mechanism is largely obscure. Here we explore the epigenetic state of the Xi in SmcHD1-deficient epiblast stem cells (EpiSCs) and mouse embryonic fibroblasts (MEFs) in comparison with their wild-type counterparts...
July 14, 2022: Development
https://read.qxmd.com/read/35729652/tideglusib-promotes-wound-healing-in-aged-skin-by-activating-pi3k-akt-pathway
#17
JOURNAL ARTICLE
Jiachen Sun, Hongqing Zhao, Chuan'an Shen, Shiyi Li, Wen Zhang, Jinglong Ma, Zhisheng Li, Ming Zhang, Jianqiu Yang
BACKGROUND: Aging disturbs the skin morphology and function, manifested as thinned epithelium and impaired wound healing. As a major type of skin cells, epidermal stem cells (EpiSCs) are inevitably affected by aging. The effect of age on EpiSCs and wound healing needs to be further explored. METHODS: Skin RNA-seq data of young (5 months) and old (30 months) CB6F1 mice were obtained from GEO Series GSE35322 with 10 in each age group. Differentially expressed genes were analyzed, and EpiSCs-related pathways were enriched by KEGG...
June 21, 2022: Stem Cell Research & Therapy
https://read.qxmd.com/read/35594859/esrrb-is-a-cell-cycle-dependent-associated-factor-balancing-pluripotency-and-xen-differentiation
#18
JOURNAL ARTICLE
Sapir Herchcovici Levy, Sharon Feldman Cohen, Lee Arnon, Shlomtzion Lahav, Muhammad Awawdy, Adi Alajem, Danny Bavli, Xue Sun, Yosef Buganim, Oren Ram
Cell cycle and differentiation decisions are linked; however, the underlying principles that drive these decisions are unclear. Here, we combined cell-cycle reporter system and single-cell RNA sequencing (scRNA-seq) profiling to study the transcriptomes of embryonic stem cells (ESCs) in the context of cell-cycle states and differentiation. By applying retinoic acid, to G1 and G2/M ESCs, we show that, while both populations can differentiate toward epiblast stem cells (EpiSCs), only G2/M ESCs could differentiate into extraembryonic endoderm cells...
June 14, 2022: Stem Cell Reports
https://read.qxmd.com/read/35554344/untangling-the-web-of-protein-kinase-c-mediated-regulation-of-na%C3%A3-ve-vs-primed-state-of-pluripotency
#19
JOURNAL ARTICLE
Ishita Baral, Debasree Dutta
INTRODUCTION-: Pluripotency of stem cells is associated with the dynamicity of the embryo's developmental stage from which they are derived. Stem cells derived from the pre-implantation embryo, called embryonic stem cells (ESCs), are naïve in nature, whereas post-implantation embryo-derived stem cells, termed epiblast stem cells (EpiSCs), represent the primed state of pluripotency. Maintaining these stem cells in a naïve state is an essential arena of stem cell research since naïve ESCs are capable of clonal propagation and germline transmission, making them a crucial research tool in organogenesis and disease modeling...
May 2022: FASEB Journal: Official Publication of the Federation of American Societies for Experimental Biology
https://read.qxmd.com/read/35511866/linc1548-promotes-the-transition-of-epiblast-stem-cells-into-neural-progenitors-by-engaging-oct6-and-sox2
#20
JOURNAL ARTICLE
Mingliang Bai, Guoping Li, Zeyidan Jiapaer, Xudong Guo, Jiajie Xi, Guiying Wang, Dan Ye, Wen Chen, Baoyu Duan, Jiuhong Kang
The transition of embryonic stem cells from the epiblast stem cells (EpiSCs) to neural progenitor cells (NPCs), called the neural induction process, is crucial for cell fate determination of neural differentiation. However, the mechanism of this transition is unclear. Here, we identified a long non-coding RNA (linc1548) as a critical regulator of neural differentiation of mouse embryonic stem cells (mESCs). Knockout of linc1548 did not affect the conversion of mESCs to EpiSCs, but delayed the transition from EpiSCs to NPCs...
March 3, 2022: Stem Cells
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