keyword
https://read.qxmd.com/read/38355578/leukemic-stem-cells-activate-lineage-inappropriate-signalling-pathways-to-promote-their-growth
#21
JOURNAL ARTICLE
Sophie G Kellaway, Sandeep Potluri, Peter Keane, Helen J Blair, Luke Ames, Alice Worker, Paulynn S Chin, Anetta Ptasinska, Polina K Derevyanko, Assunta Adamo, Daniel J L Coleman, Naeem Khan, Salam A Assi, Anja Krippner-Heidenreich, Manoj Raghavan, Peter N Cockerill, Olaf Heidenreich, Constanze Bonifer
Acute Myeloid Leukemia (AML) is caused by multiple mutations which dysregulate growth and differentiation of myeloid cells. Cells adopt different gene regulatory networks specific to individual mutations, maintaining a rapidly proliferating blast cell population with fatal consequences for the patient if not treated. The most common treatment option is still chemotherapy which targets such cells. However, patients harbour a population of quiescent leukemic stem cells (LSCs) which can emerge from quiescence to trigger relapse after therapy...
February 14, 2024: Nature Communications
https://read.qxmd.com/read/38346193/the-gata-transcriptional-program-dictates-cell-fate-equilibrium-to-establish-the-maternal-fetal-exchange-interface-and-fetal-development
#22
JOURNAL ARTICLE
Ananya Ghosh, Rajnish Kumar, Ram P Kumar, Soma Ray, Abhik Saha, Namrata Roy, Purbasa Dasgupta, Courtney Marsh, Soumen Paul
The placenta establishes a maternal-fetal exchange interface to transport nutrients and gases between the mother and the fetus. Establishment of this exchange interface relies on the development of multinucleated syncytiotrophoblasts (SynT) from trophoblast progenitors, and defect in SynT development often leads to pregnancy failure and impaired embryonic development. Here, we show that mouse embryos with conditional deletion of transcription factors GATA2 and GATA3 in labyrinth trophoblast progenitors (LaTPs) have underdeveloped placenta and die by ~embryonic day 9...
February 20, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38344749/-dbx1-is-a-dorsal-midbrain-specific-determinant-of-gabaergic-neuron-fate-and-regulates-differentiation-of-the-dorsal-midbrain-into-the-inferior-and-superior-colliculi
#23
JOURNAL ARTICLE
Hong-Nhung Tran, Quy-Hoai Nguyen, Yongsu Jeong
The mechanism underlying the differentiation of the dorsal midbrain into two morphologically and functionally distinct compartments, the inferior colliculus (IC) and superior colliculus (SC), which process auditory and visual information, respectively, remains largely unexplored. By using null and conditional alleles, we uncover the roles of a homeodomain transcription factor Dbx1 in the regulation of IC and SC differentiation. We show that Dbx1 regulates GABAergic neuron development in the dorsal midbrain...
2024: Frontiers in Cell and Developmental Biology
https://read.qxmd.com/read/38290790/gata2-deficiency-of-a-novel-missense-variant-with-multiorgan-inflammation
#24
JOURNAL ARTICLE
Hiroyuki Baba, Naoki Kimura, Hirokazu Kanegane, Fuyuki Miya, Kenjiro Kosaki, Tomohiro Morio, Ryuji Koike
No abstract text is available yet for this article.
January 30, 2024: Rheumatology
https://read.qxmd.com/read/38290592/transcriptome-wide-n6-methyladenosine-m6a-methylation-profiling-of-long-non-coding-rnas-in-ovarian-endometriosis
#25
JOURNAL ARTICLE
Hengwei Liu, Jiaxin Liang, Xin Dai, Yuan Peng, Wenqian Xiong, Ling Zhang, Xiaoou Li, Wenyuan Li, Keyi Liu, Siyi Bi, Xiwen Wang, Wei Zhang, Yi Liu
N6-methyladenosine (m6A) methylation is the most prevalent internal epigenetic posttranscriptional mechanism for regulating mammalian RNA. Despite recent advances in determining the biological functions of m6A methylation, its association with the pathology of ovarian endometriosis remains uncertain. Herein, we performed m6A transcriptome-wide profiling to identify key lncRNAs with m6A modification involved in ovarian endometriosis development by bioinformatics analysis. We found the total m6A level was lower in ovarian endometriosis than in normal endometrium samples, with 9663 m6A peaks associated with 8989 lncRNAs detected in ovarian endometriosis and 9902 m6A peaks associated with 9210 lncRNAs detected in normal endometrium samples...
January 28, 2024: Genomics
https://read.qxmd.com/read/38281404/growth-hormone-directly-stimulates-gata2-expression
#26
JOURNAL ARTICLE
Mana Mitsutani, Midori Matsushita, Mei Yokoyama, Ayumu Morita, Hiromi Hano, Tomomi Fujikawa, Tetsuya Tagami, Kenji Moriyama
OBJECTIVE: GATA2 is a key transcription factor involved in the differentiation and determination of thyrotrophs and gonadotrophs in pituitary and hematopoietic development. However, studies on the upstream ligands of the GATA2 signal transduction pathway have been limited. To identify upstream ligands, we examined growth hormone (GH) as a plausible stimulator. DESIGN: We evaluated GH-induced GATA2 expression in murine TtT/GF thyrotrophic pituitary tumor cells and its direct impact on the GHR/JAK/STAT5 pathway using a combination of a reporter assay, real-time quantitative polymerase chain reaction, and western blotting...
January 24, 2024: Growth Hormone & IGF Research
https://read.qxmd.com/read/38267311/-suspicion-of-constitutional-abnormality-at-diagnosis-of-childhood-leukemia-update-of-the-leukemia-committee-of-the-french-society-of-childhood-cancers
#27
Marion Strullu, Elie Cousin, Sandrine de Montgolfier, Laurene Fenwarth, Nathalie Gachard, Isabelle Arnoux, Nicolas Duployez, Sandrine Girard, Audrey Guilmatre, Marina Lafage, Marie Loosveld, Arnaud Petit, Laurence Perrin, Yoan Vial, Paul Saultier
The spectrum of childhood leukemia predisposition syndromes has grown significantly over last decades. These predisposition syndromes mainly involve CEBPA, ETV6, GATA2, IKZF1, PAX5, RUNX1, SAMD9/SAMD9L, TP53, RAS-MAPK pathway, DNA mismatch repair system genes, genes associated with Fanconi anemia, and trisomy 21. The clinico-biological features leading to the suspicion of a leukemia predisposition are highly heterogeneous and require varied exploration strategies. The study of the initial characteristics of childhood leukemias includes high-throughput sequencing techniques, which have increased the frequency of situations where a leukemia predisposing syndrome is suspected...
January 23, 2024: Bulletin du Cancer
https://read.qxmd.com/read/38236609/acute-myeloid-leukemia-with-gata2-and-wt1-mutations-mimicking-acute-promyelocytic-leukemia
#28
JOURNAL ARTICLE
Hongwei Chen, Haiyang Wang
No abstract text is available yet for this article.
January 18, 2024: Blood
https://read.qxmd.com/read/38231078/cdkn2b-as1-may-act-as-mir-92a-3p-sponge-in-coronary-artery-disease
#29
JOURNAL ARTICLE
Fei Xie, Dan Wang, Ming Cheng
BACKGROUND: LncRNAs, miRNAs, and the sponge effect between them exert diverse biological influences on the pathogenesis and progression of coronary artery disease (CAD), thus necessitating an exploration of the lncRNA-miRNA-gene regulatory network in CAD. METHODS: Expression profile GSE98583 was obtained from NCBI, containing the data of 12 CAD patients and 6 controls. Limma package was utilized to determine the differentially expressed genes (DEGs). Functional enrichment analysis was performed by DAVID...
January 17, 2024: Minerva cardiology and angiology
https://read.qxmd.com/read/38228680/prognostic-impact-of-cebpa-mutational-subgroups-in-adult-aml
#30
JOURNAL ARTICLE
Julia-Annabell Georgi, Sebastian Stasik, Michael Kramer, Manja Meggendorfer, Christoph Röllig, Torsten Haferlach, Peter Valk, David Linch, Tobias Herold, Nicolas Duployez, Franziska Taube, Jan Moritz Middeke, Uwe Platzbecker, Hubert Serve, Claudia D Baldus, Carsten Muller-Tidow, Claudia Haferlach, Sarah Koch, Wolfgang E Berdel, Bernhard J Woermann, Utz Krug, Jan Braess, Wolfgang Hiddemann, Karsten Spiekermann, Emma L Boertjes, Robert K Hills, Alan Burnett, Gerhard Ehninger, Klaus Metzeler, Maja Rothenberg-Thurley, Annika Dufour, Hervé Dombret, Cecile Pautas, Claude Preudhomme, Laurene Fenwarth, Martin Bornhäuser, Rosemary Gale, Christian Thiede
Despite recent refinements in the diagnostic and prognostic assessment of CEBPA mutations in AML, several questions remain open, i.e. implications of different types of basic region leucin zipper (bZIP) mutations, the role of co-mutations and the allelic state. Using pooled primary data analysis on 1010 CEBPA-mutant adult AML patients, a comparison was performed taking into account the type of mutation (bZIP: either typical in-frame insertion/deletion (InDel) mutations (bZIPInDel ), frameshift InDel or nonsense mutations inducing translational stop (bZIPSTOP ) or single base-pair missense alterations (bZIPms ), and transcription activation domain (TAD) mutations) and the allelic state (single (smCEBPA) vs...
January 16, 2024: Leukemia
https://read.qxmd.com/read/38224029/identification-of-renal-transplantation-rejection-biomarkers-in-blood-using-the-systems-biology-approach
#31
JOURNAL ARTICLE
Fatemeh Saberi, Zeinab Dehghan, Effat Noori, Hakimeh Zali
BACKGROUND: Renal transplantation plays an essential role in the quality of life of patients with end-stage renal disease. At least 12% of the renal patients receiving transplantations show graft rejection. One of the methods used to diagnose renal transplantation rejection is renal allograft biopsy. This procedure is associated with some risks such as bleeding and arteriovenous fistula formation. In this study, we applied a bioinformatics approach to identify serum markers for graft rejection in patients receiving a renal transplantation...
August 23, 2023: Iranian Biomedical Journal
https://read.qxmd.com/read/38205536/evaluation-of-the-genetic-basis-of-familial-associated-early-onset-hematologic-cancers-in-an-ancestral-ethnically-diverse-population
#32
JOURNAL ARTICLE
Qianxi Feng, Keren Xu, Mancy Shah, Shaobo Li, Andrew D Leavitt, Lucy A Godley, Adam J De Smith, Joseph L Wiemels
Genetic predisposition to hematologic malignancies has historically been addressed utilizing patients recruited from clinical trials and pedigrees constructed at major treatment centers. Such efforts leave unexplored the genetic basis of variations in risk by race/ethnic group shown in population-based surveillance data where cancer registration, compulsory by law, delivers universal enrollment. To address this, we performed exome sequencing on DNA isolated from newborn bloodspots derived from sibling pairs with early-onset cancers across California in which at least one of the siblings developed a hematologic cancer, using unbiased recruitment from the full state population...
January 11, 2024: Haematologica
https://read.qxmd.com/read/38203823/germline-variants-and-characteristic-features-of-hereditary-hematological-malignancy-syndrome
#33
REVIEW
Hironori Arai, Hirotaka Matsui, SungGi Chi, Yoshikazu Utsu, Shinichi Masuda, Nobuyuki Aotsuka, Yosuke Minami
Due to the proliferation of genetic testing, pathogenic germline variants predisposing to hereditary hematological malignancy syndrome (HHMS) have been identified in an increasing number of genes. Consequently, the field of HHMS is gaining recognition among clinicians and scientists worldwide. Patients with germline genetic abnormalities often have poor outcomes and are candidates for allogeneic hematopoietic stem cell transplantation (HSCT). However, HSCT using blood from a related donor should be carefully considered because of the risk that the patient may inherit a pathogenic variant...
January 4, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38200865/optimising-electroporation-condition-for-crispr-cas-mediated-knockout-in-zona-intact-buffalo-zygotes
#34
JOURNAL ARTICLE
Meeti Punetha, Dharmendra Kumar, Sheetal Saini, Suman Chaudhary, Kamlesh Kumari Bajwa, Surabhi Sharma, Manu Mangal, Prem S Yadav, Jonathan A Green, Kristin Whitworth, Tirtha K Datta
Somatic cell nuclear transfer or cytoplasm microinjection has widely been used to produce genome-edited farm animals; however, these methods have several drawbacks which reduce their efficiency. In the present study, we describe an easy adaptable approach for the introduction of mutations using CRISPR-Cas9 electroporation of zygote (CRISPR-EP) in buffalo. The goal of the study was to determine the optimal conditions for an experimental method in which the CRISPR/Cas9 system is introduced into in vitro-produced buffalo zygotes by electroporation...
December 30, 2023: Animals: An Open Access Journal From MDPI
https://read.qxmd.com/read/38193715/linking-gata2-to-myeloid-dysplasia-and-complex-cytogenetics-in-adult-myelodysplastic-neoplasm-and-acute-myeloid-leukemia
#35
JOURNAL ARTICLE
Daniel J Robbins, Tatiana S Pavletich, Apoorva T Patil, Demetra Pahopos, Michael Lasarev, Usha S Polaki, Zhubin J Gahvari, Emery H Bresnick, Daniel R Matson
GATA binding protein 2 (GATA2) is a conserved zinc finger transcription factor that regulates the emergence and maintenance of complex genetic programs driving development and function of hematopoietic stem and progenitor cells (HSPCs). Patients born with monoallelic GATA2 mutations develop myelodysplastic neoplasm (MDS) and acute myeloid leukemia (AML), whereas acquired GATA2 mutations are reported in 3% to 5% of sporadic AML cases. The mechanisms by which aberrant GATA2 activity promotes MDS and AML are incompletely understood...
January 9, 2024: Blood Advances
https://read.qxmd.com/read/38191334/the-role-of-genetic-factors-in-pediatric-myelodysplastic-syndromes-with-different-outcomes
#36
JOURNAL ARTICLE
Ying Li, Li Cheng, Yun Peng, Lin Wang, Wenzhi Zhang, Yuhong Yin, Jing Zhang, Xiaoyan Wu
BACKGROUND: Pediatric myelodysplastic syndromes (MDS) are rare disorders with an unrevealed pathogenesis. Our aim is to explore the role of genetic factors in the pathogenesis of MDS in children with different outcomes and to discover the correlation between genetic features and clinical outcomes as well as disease characteristics. METHODS: We conducted an analysis of archived genetic data from 26 patients diagnosed with pediatric MDS at our institution between 2015 and 2021, examining the association between different genetic characteristics and clinical manifestations as well as prognosis...
January 8, 2024: BMC Pediatrics
https://read.qxmd.com/read/38189472/potential-diagnostic-markers-and-therapeutic-targets-for-periodontitis-and-alzheimer-s-disease-based-on-bioinformatics-analysis
#37
JOURNAL ARTICLE
Kai Yang, Zhaoqi Zhang, Qingyuan Zhang, Hongyu Zhang, Xiaoju Liu, Zhicheng Jia, Zhenhao Ying, Wei Liu
BACKGROUND AND OBJECTIVE: As a chronic inflammatory disease, periodontitis threatens oral health and is a risk factor for Alzheimer's disease (AD). There is growing evidence that these two diseases are closely related. However, current research is still incomplete in understanding the common genes and common mechanisms between periodontitis and AD. In this study, we aimed to identify common genes in periodontitis and AD and analyze the relationship between crucial genes and immune cells to provide new therapeutic targets for clinical treatment...
January 8, 2024: Journal of Periodontal Research
https://read.qxmd.com/read/38189150/a-genomic-link-from-heart-failure-to-atrial-fibrillation-risk-fog2-modulates-a-tbx5-gata4-dependent-atrial-gene-regulatory-network
#38
JOURNAL ARTICLE
Michael T Broman, Rangarajan D Nadadur, Carlos Perez-Cervantes, Ozanna Burnicka-Turek, Sonja Lazarevic, Anna Gams, Brigitte Laforest, Jeffrey D Steimle, Sabrina Iddir, Zhezhen Wang, Linsin Smith, Stefan R Mazurek, Harold E Olivey, Pingzhu Zhou, Margaret Gadek, Kaitlyn M Shen, Zoheb Khan, Joshua W M Theisen, Xinan H Yang, Kohta Ikegami, Igor R Efimov, William T Pu, Christopher R Weber, Elizabeth M McNally, Eric C Svensson, Ivan P Moskowitz
BACKGROUND: The relationship between heart failure (HF) and atrial fibrillation (AF) is clear, with up to half of patients with HF progressing to AF. The pathophysiological basis of AF in the context of HF is presumed to result from atrial remodeling. Upregulation of the transcription factor FOG2 (friend of GATA2; encoded by ZFPM2 ) is observed in human ventricles during HF and causes HF in mice. METHODS: FOG2 expression was assessed in human atria. The effect of adult-specific FOG2 overexpression in the mouse heart was evaluated by whole animal electrophysiology, in vivo organ electrophysiology, cellular electrophysiology, calcium flux, mouse genetic interactions, gene expression, and genomic function, including a novel approach for defining functional transcription factor interactions based on overlapping effects on enhancer noncoding transcription...
January 8, 2024: Circulation
https://read.qxmd.com/read/38178813/a-five-gene-qpcr-signature-can-classify-type-2-asthma-comparably-to-microscopy-of-induced-sputum-from-severe-asthma-patients
#39
JOURNAL ARTICLE
B Toennesen, J M Schmid, B S Sørensen, M Fricker, H J H Hoffmann
UNLABELLED: Asthma is a heterogenous disease characterized by airway inflammation and variable expiratory airflow limitation resulting in variable respiratory symptoms. Characterization of airway inflammation is important to choose the optimal treatment for severe asthma patients eligible for biological treatment. However, counting cells in induced sputum samples are a time-consuming process, highly dependent on personal skills. Replacing eosinophil and neutrophil cell counting with qPCR for transcripts of selected mast cell, and basophil genes may provide more reproducible results...
2024: European Clinical Respiratory Journal
https://read.qxmd.com/read/38168819/perturbed-collagen-metabolism-underlies-lymphatic-recanalization-failure-in-gata2-heterozygous-deficient-mice
#40
JOURNAL ARTICLE
Tomomi Watanabe-Asaka, Moyuru Hayashi, Takuya Harada, Satoshi Uemura, Jun Takai, Yasuhiro Nakamura, Takashi Moriguchi, Yoshiko Kawai
Lymphedema has become a global health issue following the growing number of cancer surgeries. Curative or supportive therapeutics have long been awaited for this refractory condition. Transcription factor GATA2 is crucial in lymphatic development and maintenance, as GATA2 haploinsufficient disease often manifests as lymphedema. We recently demonstrated that Gata2 heterozygous deficient mice displayed delayed lymphatic recanalization upon lymph node resection. However, whether GATA2 contributes to lymphatic regeneration by functioning in the damaged lymph vessels' microenvironment remains explored...
January 2, 2024: Journal of Biochemistry
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