keyword
https://read.qxmd.com/read/38625795/space-and-genealogy-determine-inter-individual-differences-in-siderophore-gene-expression-in-bacterial-colonies
#21
JOURNAL ARTICLE
Subham Mridha, Tobias Wechsler, Rolf Kümmerli
Heterogeneity in gene expression is common among clonal cells in bacteria, although the sources and functions of variation often remain unknown. Here, we track cellular heterogeneity in the bacterium Pseudomonas aeruginosa during colony growth by focusing on siderophore gene expression (pyoverdine versus pyochelin) important for iron nutrition. We find that the spatial position of cells within colonies and non-genetic yet heritable differences between cell lineages are significant sources of cellular heterogeneity, while cell pole age and lifespan have no effect...
April 15, 2024: Cell Reports
https://read.qxmd.com/read/38624181/iron-limitation-of-heterotrophic-bacteria-in-the-california-current-system-tracks-relative-availability-of-organic-carbon-and-iron
#22
JOURNAL ARTICLE
Lauren E Manck, Tyler H Coale, Brandon M Stephens, Kiefer O Forsch, Lihini I Aluwihare, Christopher L Dupont, Andrew E Allen, Katherine A Barbeau
Iron is an essential nutrient for all microorganisms in the marine environment. Iron limitation of primary production has been well documented across a significant portion of the global surface ocean, but much less is known regarding the potential for iron limitation of the marine heterotrophic microbial community. In this work, we characterize the transcriptomic response of the heterotrophic bacterial community to iron additions in the California Current System, an eastern boundary upwelling system, to detect in situ iron stress of heterotrophic bacteria...
April 16, 2024: ISME Journal
https://read.qxmd.com/read/38616197/equilibrium-and-kinetic-modeling-of-cr-vi-removal-by-novel-tolerant-bacteria-species-along-with-zero-valent-iron-nanoparticles
#23
JOURNAL ARTICLE
Shashank Garg, Simranjeet Singh, Nadeem A Khan, Jastin Samuel, Praveen C Ramamurthy, Joginder Singh
This work describes the study of the removal of a refractory contaminant, i.e., Hexavalent chromium (Cr(VI)) from aqueous systems by a novel adsorbent comprising Cr(VI) tolerant bacteria and zero valent iron nanoparticle (nZVI). A gram-positive, rod-shaped bacteria used in the study were isolated from wastewater (WW) received from the effluent of leather industries. The adsorbents were prepared with bacteria, nZVI alone, and a combination of both. The adsorbent comprising both elements was found to remove Cr(VI) with a higher percentage (93%) and higher capacities (0...
April 14, 2024: Scientific Reports
https://read.qxmd.com/read/38614291/novel-transcriptional-regulator-oxtr1-regulates-potential-ferrodoxin-in-response-to-oxygen-stress-in-treponema-denticola
#24
JOURNAL ARTICLE
Yumi Numata, Yuichiro Kikuchi, Toru Sato, Kazuko Okamoto-Shibayama, Yutaro Ando, Yuri Miyai-Murai, Eitoyo Kokubu, Kazuyuki Ishihara
OBJECTIVE: Treponema denticola has been strongly implicated in the pathogenesis of chronic periodontitis. Previously, we reported that the potential transcriptional regulator TDE_0259 (oxtR1) is upregulated in the bacteriocin ABC transporter gene-deficient mutant. OxtR1 may regulate genes to adapt to environmental conditions during colonization; however, the exact role of the gene in T. denticola has not been reported. Therefore, we investigated its function using an oxtR1-deficient mutant...
April 11, 2024: Anaerobe
https://read.qxmd.com/read/38614032/amorphous-fe-substrate-enhances-nitrogen-and-phosphorus-removal-in-sulfur-autotrophic-process
#25
JOURNAL ARTICLE
Kebing Zhou, Hao Zhang, Dong Guo, Shuocheng Gao, Yuansheng Pei, Li'an Hou
The autotrophic denitrification of coupled sulfur and natural iron ore can remove nitrogen and phosphorus from wastewater with low C/N ratios. However, the low solubility of crystalline Fe limits its bioavailability and P absorption capacity. This study investigated the effects of amorphous Fe in drinking water treatment residue (DWTR) and crystalline Fe in red mud (RM) on nitrogen and phosphorus removal during sulfur autotrophic processes. Two types of S-Fe cross-linked filler particles with three-dimensional mesh structures were obtained by combining sulfur with the DWTR/RM using the hydrogel encapsulation method...
April 9, 2024: Water Research
https://read.qxmd.com/read/38607527/biosynthesis-optimization-of-antibacterial-magnetic-iron-oxide-nanoparticles-from-bacillus-megaterium
#26
JOURNAL ARTICLE
Sajedeh Hajiali, Sara Daneshjou, Somayeh Daneshjoo, Khosro Khajeh
The occurrence of antibiotic resistance on common bacterial agents and the need to use new generations of antibiotics have led to the use of various strategies for production. Taking inspiration from nature, using bio-imitation patterns, in addition to the low cost of production, is advantageous and highly accurate. In this research, we were able to control the temperature, shake, and synthesis time of the synthesis conditions of Bacillus megaterium bacteria as a model for the synthesis of magnetic iron nanoparticles and optimize the ratio of reducing salt to bacterial regenerating agents as well as the concentration of salt to create iron oxide nanoparticles with more favorable properties and produced with more antibacterial properties...
April 12, 2024: Biological Trace Element Research
https://read.qxmd.com/read/38606523/current-iron-therapy-in-the-light-of-regulation-intestinal-microbiome-and-toxicity-are-we-prescribing-too-much-iron
#27
REVIEW
Anaëlle L Dentand, Morton G Schubert, Pierre-Alexandre Krayenbuehl
Iron deficiency is a widespread global health concern with varying prevalence rates across different regions. In developing countries, scarcity of food and chronic infections contribute to iron deficiency, while in industrialized nations, reduced food intake and dietary preferences affect iron status. Other causes that can lead to iron deficiency are conditions and diseases that result in reduced intestinal iron absorption and blood loss. In addition, iron absorption and its bioavailability are influenced by the composition of the diet...
April 12, 2024: Critical Reviews in Clinical Laboratory Sciences
https://read.qxmd.com/read/38604480/deep-insights-into-the-roles-and-microbial-ecological-mechanisms-behind-waste-activated-sludge-digestion-triggered-by-persulfate-oxidation-activated-through-multiple-modes
#28
JOURNAL ARTICLE
Lijiao Yin, Aijuan Zhou, Yaoli Wei, Cristiano Varrone, Dengfei Li, Jingyang Luo, Zhangwei He, Wenzong Liu, Xiuping Yue
Persulfate oxidation (PS) is widely employed as a promising alternative for waste activated sludge pretreatment due to the capability of generating free radicals. The product differences and microbiological mechanisms by which PS activation triggers WAS digestion through multiple modes need to be further investigated. This study comprehensively investigated the effects of persulfate oxidation activated through multiple modes, i.e., ferrous, zero-valent iron (ZVI), ultraviolet (UV) and heat, on the performance of sludge digestion...
April 9, 2024: Environmental Research
https://read.qxmd.com/read/38599352/biogas-upgrading-performance-and-underlying-mechanism-in-microbial-electrolysis-cell-and-anaerobic-digestion-integrated-system
#29
JOURNAL ARTICLE
Yufang Wei, Wangmi Chen, Jiaqi Hou, Xuejiao Qi, Meiying Ye, Ning Jiang, Fanhua Meng, Beidou Xi, Mingxiao Li
The productivity and efficiency of two-chamber microbial electrolysis cell and anaerobic digestion integrated system (MEC-AD) were promoted by a complex of anaerobic granular sludge and iron oxides (Fe-AnGS) as inoculum. Results showed that MEC-AD with Fe-AnGS achieved biogas upgrading with a 23%-29% increase in the energy recovery rate of external circuit current and a 26%-31% decrease in volatile fatty acids. The energy recovery rate of MEC-AD remained at 52%-57%, indicating a stable operation performance...
April 8, 2024: Bioresource Technology
https://read.qxmd.com/read/38599347/l-tryptophan-anaerobic-fermentation-for-indole-acetic-acid-production-bacterial-enrichment-and-effects-of-zero-valent-iron
#30
JOURNAL ARTICLE
Meng-Yao Ma, Li-Li Hu, Wen-Yan Xu, Wei Zhang
Indole acetic acid (IAA) as a plant hormone, was one of the valuable products of anaerobic fermentation. However, the enriching method remained unknown. Moreover, whether zero-valent iron (ZVI) could enhance IAA production was unexplored. In this work, IAA producing bacteria Klebsiella (63 %) was enriched successfully. IAA average production rate and concentration were up to 3 mg/L/h and 56 mg/L. With addition of 1 g/L ZVI, IAA average production rate and concentration was increased for 2 and 3 folds...
April 8, 2024: Bioresource Technology
https://read.qxmd.com/read/38593340/biosynthetic-potential-of-the-sediment-microbial-subcommunities-of-an-unexplored-karst-ecosystem-and-its-ecological-implications
#31
JOURNAL ARTICLE
Pablo Suárez-Moo, Alejandra Prieto-Davó
Microbial communities from various environments have been studied in the quest for new natural products with a broad range of applications in medicine and biotechnology. We employed an enrichment method and genome mining tools to examine the biosynthetic potential of microbial communities in the sediments of a coastal sinkhole within the karst ecosystem of the Yucatán Peninsula, Mexico. Our investigation led to the detection of 203 biosynthetic gene clusters (BGCs) and 55 secondary metabolites (SMs) within 35 high-quality metagenome-assembled genomes (MAGs) derived from these subcommunities...
April 2024: MicrobiologyOpen
https://read.qxmd.com/read/38591913/siderophore-mediated-iron-acquisition-by-klebsiella-pneumoniae
#32
JOURNAL ARTICLE
Ashish Kumar, Somnath Chakravorty, Taihao Yang, Thomas A Russo, Salete M Newton, Phillip E Klebba
UNLABELLED: Microbes synthesize and secrete siderophores, that bind and solubilize precipitated or otherwise unavailable iron in their microenvironments. Gram (-) bacterial TonB-dependent outer membrane receptors capture the resulting ferric siderophores to begin the uptake process. From their similarity to fepA, the structural gene for the Escherichia coli ferric enterobactin (FeEnt) receptor, we identified four homologous genes in the human and animal ESKAPE pathogen Klebsiella pneumoniae (strain Kp52...
April 9, 2024: Journal of Bacteriology
https://read.qxmd.com/read/38590537/new-variochelins-from-soil-isolated-variovorax-sp-h002
#33
JOURNAL ARTICLE
Jabal Rahmat Haedar, Aya Yoshimura, Toshiyuki Wakimoto
The soil bacterial genus Variovorax produce distinct photoreactive siderophores that may play a crucial role in the iron cycle within the rhizosphere. This study focused on exploring the natural products of the soil-isolated Variovorax sp. H002, leading to the isolation of variochelins A-E ( 1 - 5 ), a series of lipohexapeptide siderophores. NMR and MS/MS analyses revealed that these siderophores share a common core structure - a linear hexapeptide with β-hydroxyaspartate and hydroxamate functional groups, serving in iron-binding coordination...
2024: Beilstein Journal of Organic Chemistry
https://read.qxmd.com/read/38585906/outer-membrane-vesicles-can-contribute-to-cellulose-degradation-in-teredinibacter-turnerae-a-cultivable-intracellular-endosymbiont-of-shipworms
#34
Mark T Gasser, Annie Liu, Marvin Altamia, Bryan R Brensinger, Sarah L Brewer, Ron Flatau, Eric R Hancock, Sarah P Preheim, Claire Marie Filone, Dan L Distel
Teredinibacter turnerae is a cultivable cellulolytic Gammaproeteobacterium (Cellvibrionaceae) that commonly occurs as an intracellular endosymbiont in the gills of wood-eating bivalves of the family Teredinidae (shipworms). The genome of T. turnerae encodes a broad range of enzymes that deconstruct cellulose, hemicellulose, and pectin and contribute to lignocellulose digestion in the shipworm gut. However, the mechanism by which symbiont-made enzymes are secreted by T. turnerae and subsequently transported to the site of lignocellulose digestion in the shipworm gut is incompletely understood...
March 27, 2024: bioRxiv
https://read.qxmd.com/read/38584952/endophytic-bacillus-vallismortis-and-bacillus-tequilensis-bacteria-isolated-from-medicinal-plants-enhance-phosphorus-acquisition-and-fortify-brassica-napus-l-vegetative-growth-and-metabolic-content
#35
JOURNAL ARTICLE
Aziza Nagah, Mostafa M El-Sheekh, Omnia M Arief, Mashael Daghash Alqahtani, Basmah M Alharbi, Ghada E Dawwam
Phosphorus fertilization imposes critical limitations on crop productivity and soil health. The aim of the present work is to explore the potential of two phosphate solubilizing bacteria (PSB) species in phosphorus supplementation of canola ( Brassica napus L.). Out of 38 bacterial isolates obtained from nine medicinal plants, two bacterial strains (20P and 28P) were proved as the most potent for the in-vitro tricalcium phosphate solubilization test. These isolates verified their activity toward different enzymes as nitrogenase and alkaline phosphatase...
2024: Frontiers in Plant Science
https://read.qxmd.com/read/38583819/cold-adapted-exiguobacterium-sibiricum-k1-as-a-potential-bioinoculant-in-cold-regions-physiological-and-genomic-elucidation-of-biocontrol-and-plant-growth-promotion
#36
JOURNAL ARTICLE
Sareeka Kumari, Anil Kumar, Ayush Lepcha, Rakshak Kumar
The scarcity of soil nutrient availability under cold conditions of Himalayan regions needs a sustainable approach for better crop yields. The cold-adapted bacteria, Exiguobacterium sibiricum K1, with the potential to produce several plant growth-promoting (PGP) attributes, nitrogen fixation, indole acetic acid production, phosphate and potassium solubilization at 10 °C can provide an opportunity to promote crop yield improvement in an eco-friendly way under cold conditions. The bacterium also exhibited biocontrol activity against two phytopathogens and produced siderophore (53...
April 5, 2024: Gene
https://read.qxmd.com/read/38582429/asynchronous-characteristics-of-feammox-and-iron-reduction-from-paddy-soils-in-southern-china
#37
JOURNAL ARTICLE
Ding Ma, Jin Wang, Jintao Fang, Yifan Jiang, Yue Zhengbo
Recently, the newly discovered anaerobic ammonium oxidation coupled with iron reduction (i.e., Feammox) has been proven to be a widespread nitrogen (N) loss pathway in ecosystems and has an essential contribution to gaseous N loss in paddy soil. However, the mechanism of iron-nitrogen coupling transformation and the role of iron-reducing bacteria (IRB) in Feammox were poorly understood. This study investigated the Feammox and iron reduction changes and microbial community evolution in a long-term anaerobic incubation by 15 N isotope labeling combined with molecular biological techniques...
April 4, 2024: Environmental Research
https://read.qxmd.com/read/38582166/magnetite-driven-bio-fenton-degradation-of-chloroacetanilide-herbicides-by-a-newly-isolated-hydrogen-peroxide-producing-bacterium-desemzia-sp-strain-c1
#38
JOURNAL ARTICLE
Yongseok Ko, Sunil Ghatge, Hor-Gil Hur, Youri Yang
The efficiency of the Fenton reaction is markedly contingent upon the operational pH related to iron solubility. Therefore, a heterogeneous Fenton reaction has been developed to function at neutral pH. In the present study, the Bio-Fenton reaction was carried out using magnetite (Fe(II)Fe(III)2 O4 ) and H2 O2 generated by a newly isolated H2 O2 -producing bacterium, Desemzia sp. strain C1 at pH 6.8 to degrade chloroacetanilide herbicides. The optimal conditions for an efficient Bio-Fenton reaction were 10 mM of lactate, 0...
April 4, 2024: Chemosphere
https://read.qxmd.com/read/38580110/enhanced-sb-v-removal-of-sulfate-rich-wastewater-by-anaerobic-granular-sludge-assisted-with-fe-c-amendment
#39
JOURNAL ARTICLE
Qi Li, Yanping Zhu, Nan Jiang, Jun Li, Yanbiao Liu, Xiaoguang Chen, Xiaoyang Xu, Huangyingzi Wang, Yimeng Ma, Manhong Huang
Antimony (Sb) and sulfate are two common pollutants in Sb mine drainage and Sb-containing textile wastewater. In this paper, it was found that iron‑carbon (Fe/C) enhanced Sb(V) removal from sulfate-rich wastewater by anaerobic granular sludge (AnGS). Sulfate inhibited Sb(V) removal (S + Sb, k = 0.101), while Fe/C alleviated the inhibition and increased Sb(V) removal rate by 2.3 times (Fe/C + S + Sb, k = 0.236). Fe/C could promote the removal of Sb(III), and Sb(III) content decreased significantly after 8 h...
April 3, 2024: Science of the Total Environment
https://read.qxmd.com/read/38577780/targeting-intracellular-bacteria-with-dual-drug-loaded-lactoferrin-nanoparticles
#40
JOURNAL ARTICLE
Moses Andima, Annette Boese, Pascal Paul, Marcus Koch, Brigitta Loretz, Claus-Micheal Lehr
Treatment of microbial infections is becoming daunting because of widespread antimicrobial resistance. The treatment challenge is further exacerbated by the fact that certain infectious bacteria invade and localize within host cells, protecting the bacteria from antimicrobial treatments and the host's immune response. To survive in the intracellular niche, such bacteria deploy surface receptors similar to host cell receptors to sequester iron, an essential nutrient for their virulence, from host iron-binding proteins, in particular lactoferrin and transferrin...
April 5, 2024: ACS Infectious Diseases
keyword
keyword
61138
2
3
Fetch more papers »
Fetching more papers... Fetching...
Remove bar
Read by QxMD icon Read
×

Save your favorite articles in one place with a free QxMD account.

×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"

We want to hear from doctors like you!

Take a second to answer a survey question.