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https://www.readbyqxmd.com/read/29666882/river-flow-impacts-bacterial-and-archaeal-community-structure-in-surface-sediments-in-the-northern-gulf-of-mexico
#1
Alice C Ortmann, Pamela M Brannock, Lei Wang, Kenneth M Halanych
Meiobenthic community structure in the northern Gulf of Mexico has been shown to be driven by geographical differences due to inshore-offshore gradients and location relative to river discharge. Samples collected along three transects spanning Mobile Bay, Alabama, showed significant differences in meiobenthic communities east of the bay compared to those sampled from the west. In contrast, analysis of bacterial and archaeal communities from the same sediment samples shows that the inshore-offshore gradient has minimal impact on their community structure...
April 17, 2018: Microbial Ecology
https://www.readbyqxmd.com/read/29666446/life-on-the-edge-active-microbial-communities-in-the-kryos-mgcl-2-brine-basin-at-very-low-water-activity
#2
Lea Steinle, Katrin Knittel, Nicole Felber, Claudia Casalino, Gert de Lange, Chiara Tessarolo, Alina Stadnitskaia, Jaap S Sinninghe Damsté, Jakob Zopfi, Moritz F Lehmann, Tina Treude, Helge Niemann
The Kryos Basin is a deep-sea hypersaline anoxic basin (DHAB) located in the Eastern Mediterranean Sea (34.98°N 22.04°E). It is filled with brine of re-dissolved Messinian evaporites and is nearly saturated with MgCl2 -equivalents, which makes this habitat extremely challenging for life. The strong density difference between the anoxic brine and the overlying oxic Mediterranean seawater impedes mixing, giving rise to a narrow chemocline. Here, we investigate the microbial community structure and activities across the seawater-brine interface using a combined biogeochemical, next-generation sequencing, and lipid biomarker approach...
April 17, 2018: ISME Journal
https://www.readbyqxmd.com/read/29663079/effect-of-salinity-on-diazotrophic-activity-and-microbial-composition-of-phototrophic-communities-from-bitter-1-soda-lake-kulunda-steppe-russia
#3
Zorigto Namsaraev, Olga Samylina, Marina Sukhacheva, Gennadii Borisenko, Dimitry Y Sorokin, Tatiana Tourova
Bitter-1 is a shallow hypersaline soda lake in Kulunda Steppe (Altai region, Russia). During a study period between 2005 and 2016, the salinity in the littoral area of the lake fluctuated within the range from 85 to 400 g/L (in July of each year). Light-dependent nitrogen fixation occurred in this lake up to the salt-saturating conditions. The rates increased with a decrease in salinity, both under environmental conditions and in laboratory simulations. The salinities below 100 g/L were favorable for light-dependent nitrogen fixation, while the process was dramatically inhibited above 200 g/L salts...
April 16, 2018: Extremophiles: Life Under Extreme Conditions
https://www.readbyqxmd.com/read/29656514/microbial-diversity-and-biomarker-analysis-of-modern-freshwater-microbialites-from-laguna-bacalar-mexico
#4
D B Johnson, P A Beddows, T M Flynn, M R Osburn
Laguna Bacalar is a sulfate-rich freshwater lake on the Yucatan Peninsula that hosts large microbialites. High sulfate concentrations distinguish Laguna Bacalar from other freshwater microbialite sites such as Pavilion Lake and Alchichica, Mexico, as well as from other aqueous features on the Yucatan Peninsula. While cyanobacterial populations have been described here previously, this study offers a more complete characterization of the microbial populations and corresponding biogeochemical cycling using a three-pronged geobiological approach of microscopy, high-throughput DNA sequencing, and lipid biomarker analyses...
April 15, 2018: Geobiology
https://www.readbyqxmd.com/read/29628081/biogeochemical-cycling-of-metals-impacting-by-microbial-mobilization-and-immobilization
#5
REVIEW
Ran Jing, Birthe V Kjellerup
Microbial mobilization and immobilization processes can affect the bioavailability and mobility of metals thereby influencing their toxicity and can therefore be utilized to treat solid and liquid wastes contaminated by metals. However, the microbial mobilization and immobilization of metals depends on the microbial metabolism, the environment conditions. In this review, mobilization and immobilization of metals are discussed with regard to the presence and function of involved microorganisms and in relation to applications such as bioleaching...
April 2018: Journal of Environmental Sciences (China)
https://www.readbyqxmd.com/read/29625978/subgroup-characteristics-of-marine-methane-oxidizing-anme-2-archaea-and-their-syntrophic-partners-revealed-by-integrated-multimodal-analytical-microscopy
#6
Shawn E McGlynn, Grayson L Chadwick, Ariel O'Neill, Mason Mackey, Andrea Thor, Thomas J Deerinck, Mark H Ellisman, Victoria J Orphan
Phylogenetically diverse environmental ANME archaea and sulfate-reducing bacteria cooperatively catalyze the anaerobic oxidation of methane oxidation (AOM) in multi-celled consortia within methane seep environments. To better understand these cells and their symbiotic associations, we applied a suite of electron microscopy approaches including correlative<u>f</u>luorescence <u>i</u> n<u>s</u>itu <u>h</u>ybridization -<u>e</u>lectron<u>m</u>icroscopy (FISH-EM),<u>t</u>ransmission<u>e</u>lectron<u>m</u>icroscopy (TEM), and<u>s</u>erial<u>b</u>lock face scanning<u>e</u>lectron<u>m</u>icroscopy 3D reconstructions (SBEM)...
April 6, 2018: Applied and Environmental Microbiology
https://www.readbyqxmd.com/read/29624877/electron-acceptors-for-anaerobic-oxidation-of-methane-drive-microbial-community-structure-and-diversity-in-mud-volcanoes
#7
Ge Ren, Anzhou Ma, Yanfen Zhang, Ye Deng, Guodong Zheng, Xuliang Zhuang, Guoqiang Zhuang, Danielle Fortin
Mud volcanoes (MVs) emit globally significant quantities of methane into the atmosphere, however, methane cycling in such environments is not yet fully understood, as the roles of microbes and their associated biogeochemical processes have been largely overlooked. Here, we used data from high-throughput sequencing of microbial 16S rRNA gene amplicons from six MVs in the Junggar Basin in northwest China to quantify patterns of diversity and characterize the community structure of archaea and bacteria. We found anaerobic methanotrophs and diverse sulfate- and iron-reducing microbes in all of the samples, and the diversity of both archaeal and bacterial communities was strongly linked to the concentrations of sulfate, iron, and nitrate, which could act as electron acceptors in anaerobic oxidation of methane (AOM)...
April 6, 2018: Environmental Microbiology
https://www.readbyqxmd.com/read/29617126/long-term-feeding-of-elemental-sulfur-alters-microbial-community-structure-and-eliminates-mercury-methylation-potential-in-srb-abundant-activated-sludge
#8
Jin-Ting Wang, Liang Zhang, Yuan Kang, Guanghao Chen, Feng Jiang
This study reported a novel observation that the long-term cultivation of sulfur-reducing bacteria (S0RB) from a sulfate-reducing bacteria (SRB)-abundant seeding sludge with elemental sulfur feeding, significantly shaped the microbial community structure and eliminated the mercury methylation potential in the S0RB-enriched sludge. In this study, the enrichments of SRB and S0RB from activated sludge were obtained through long-term cultivations. Subsequently, the batch tests showed that approximately 5000 μg/L Hg (II) was completely removed from the solution by both the SRB-enriched and S0RB-enriched sludge...
April 4, 2018: Environmental Science & Technology
https://www.readbyqxmd.com/read/29611893/comparative-proteome-analysis-of-propionate-degradation-by-syntrophobacter-fumaroxidans-in-pure-culture-and-in-coculture-with-methanogens
#9
Vicente T Sedano-Núñez, Sjef Boeren, Alfons J M Stams, Caroline M Plugge
Syntrophobacter fumaroxidans is a sulfate-reducing bacterium able to grow on propionate axenically or in syntrophic interaction with methanogens or other sulfate-reducing bacteria. We performed a proteome analysis of S. fumaroxidans growing with propionate axenically with sulfate or fumarate, and in syntrophy with Methanospirillum hungatei, Methanobacterium formicicum or Desulfovibrio desulfuricans. Special attention was put on the role of hydrogen and formate in interspecies electron transfer (IET) and energy conservation...
April 3, 2018: Environmental Microbiology
https://www.readbyqxmd.com/read/29610938/the-diversity-of-sulfate-reducing-bacteria-in-the-seven-bioreactors
#10
Ivan Kushkevych, Jozef Kováč, Monika Vítězová, Tomáš Vítěz, Milan Bartoš
Anaerobic technology has a wide scope of application in different areas such as manufacturing, food industry, and agriculture. Nowadays, it is mainly used to produce electrical and thermal energy from crop processing, solid waste treatment or wastewater treatment. More intensively, trend nowadays is usage of this technology biodegradable and biomass waste processing and biomethane or hydrogen production. In this paper, the diversities of sulfate-reducing bacteria (SRB) under different imputed raw material to the bioreactors were characterized...
April 2, 2018: Archives of Microbiology
https://www.readbyqxmd.com/read/29603341/antibiotic-loaded-calcium-sulfate-bead-and-pulse-lavage-eradicates-biofilms-on-metal-implant-materials-in-vitro
#11
Cory S Knecht, James P Moley, Mary S McGrath, Jeffrey F Granger, Paul Stoodley, Devendra H Dusane
Pulse lavage (PL) debridement and antibiotic loaded calcium sulfate beads (CS-B) are both used for the treatment of biofilm related periprosthetic joint infection (PJI). However, the efficacy of these alone and in combination for eradicating biofilm from orthopaedic metal implant surfaces is unclear. The purpose of the study was to understand the efficacy of PL and antibiotic loaded CS-B in eradicating bacterial biofilms on 316L stainless steel (SS) alone and in combination in vitro. Biofilms of bioluminescent strains of Pseudomonas aeruginosa Xen41 and a USA300 MRSA Staphylococcus aureus SAP231 were grown on SS coupons for 3 days...
March 30, 2018: Journal of Orthopaedic Research: Official Publication of the Orthopaedic Research Society
https://www.readbyqxmd.com/read/29602106/enrichment-of-sulfate-reducing-anaerobic-methane-oxidizing-community-dominated-by-anme-1-from-ginsburg-mud-volcano-gulf-of-cadiz-sediment-in-a-biotrickling-filter
#12
Susma Bhattarai, Chiara Cassarini, Eldon R Rene, Yu Zhang, Giovanni Esposito, Piet N L Lens
This study was performed to enrich anaerobic methane-oxidizing archaea (ANME) present in sediment from the Ginsburg Mud Volcano (Gulf of Cadiz) in a polyurethane foam packed biotrickling filter (BTF). The BTF was operated at 20 (±2) °C, ambient pressure with continuous supply of methane for 248 days. Sulfate reduction with simultaneous sulfide production (accumulating ∼7 mM) after 200 days of BTF operation evidenced anaerobic oxidation of methane (AOM) coupled to sulfate reduction. High-throughput sequence analysis of 16S rRNA genes showed that after 248 days of BTF operation, the ANME clades enriched to more than 50% of the archaeal sequences, including ANME-1b (40...
March 6, 2018: Bioresource Technology
https://www.readbyqxmd.com/read/29599522/syntrophic-pathways-for-microbial-mercury-methylation
#13
Ri-Qing Yu, John R Reinfelder, Mark E Hines, Tamar Barkay
Exposure to dietary sources of methylmercury (MeHg) is the focus of public health concerns with environmental mercury (Hg) contamination. MeHg is formed in anoxic environments by anaerobic microorganisms. This process has been studied mostly with single-species culture incubations, although the relevance of such studies to Hg(II)-methylation in situ is limited because microbial activities in the environment are critically modulated by interactions among microbial functional groups. Here we describe experiments in which Hg(II)-methylation was examined within the context of various microbial syntrophies...
March 29, 2018: ISME Journal
https://www.readbyqxmd.com/read/29573731/sulfate-reducing-mixed-communities-with-the-ability-to-generate-bioelectricity-and-degrade-textile-diazo-dye-in-microbial-fuel-cells
#14
Waheed Miran, Jiseon Jang, Mohsin Nawaz, Asif Shahzad, Dae Sung Lee
The biotreatment of recalcitrant wastes in microbial fuel cells (MFCs) rather than chemical, physical, and advanced oxidation processes is a low-cost and eco-friendly process. In this study, sulfate-reducing mixed communities in MFC anodic chamber were employed for simultaneous electricity generation, dye degradation, and sulfate reduction. A power generation of 258 ± 10 mW/m2 was achieved under stable operating conditions in the presence of electroactive sulfate-reducing bacteria (SRB). The SRBs dominant anodic chambers result in dye, chemical oxygen demand (COD), and sulfate removal of greater than 85% at an initial COD (as lactate)/SO4 2- mass ratio of 2...
March 16, 2018: Journal of Hazardous Materials
https://www.readbyqxmd.com/read/29573198/formation-of-stromatolite-lamina-at-the-interface-of-oxygenic-anoxygenic-photosynthesis
#15
A Pace, R Bourillot, A Bouton, E Vennin, O Braissant, C Dupraz, T Duteil, I Bundeleva, P Patrier, S Galaup, Y Yokoyama, M Franceschi, A Virgone, P T Visscher
In modern stromatolites, mineralization results from a complex interplay between microbial metabolisms, the organic matrix, and environmental parameters. Here, we combined biogeochemical, mineralogical, and microscopic analyses with measurements of metabolic activity to characterize the mineralization processes and products in an emergent (<18 months) hypersaline microbial mat. While the nucleation of Mg silicates is ubiquitous in the mat, the initial formation of a Ca-Mg carbonate lamina depends on (i) the creation of a high-pH interface combined with a major change in properties of the exopolymeric substances at the interface of the oxygenic and anoxygenic photoautotrophic layers and (ii) the synergy between two major players of sulfur cycle, purple sulfur bacteria, and sulfate-reducing bacteria...
March 23, 2018: Geobiology
https://www.readbyqxmd.com/read/29551997/sulfate-transporters-in-dissimilatory-sulfate-reducing-microorganisms-a-comparative-genomics-analysis
#16
REVIEW
Angeliki Marietou, Hans Røy, Bo B Jørgensen, Kasper U Kjeldsen
The first step in the sulfate reduction pathway is the transport of sulfate across the cell membrane. This uptake has a major effect on sulfate reduction rates. Much of the information available on sulfate transport was obtained by studies on assimilatory sulfate reduction, where sulfate transporters were identified among several types of protein families. Despite our growing knowledge on the physiology of dissimilatory sulfate-reducing microorganisms (SRM) there are no studies identifying the proteins involved in sulfate uptake in members of this ecologically important group of anaerobes...
2018: Frontiers in Microbiology
https://www.readbyqxmd.com/read/29547865/functional-evaluation-of-pollutant-transformation-in-sediment-from-combined-sewer-system
#17
Xuan Shi, Huu Hao Ngo, Langtao Sang, Pengkang Jin, Xiaochang C Wang, Guanghua Wang
In this study, a pilot combined sewer system was constructed to characterize the pollutant transformation in sewer sediment. The results showed that particulate contaminants deposited from sewage could be transformed into dissolved matter by distinct pollutant transformation pathways. Although the oxidation-reduction potential (ORP) was varied from -80 mV to -340 mV in different region of the sediment, the fermentation was the dominant process in all regions of the sediment, which induced hydrolysis and decomposition of particulate contaminants...
March 13, 2018: Environmental Pollution
https://www.readbyqxmd.com/read/29547858/biostabilization-of-cadmium-contaminated-sediments-using-indigenous-sulfate-reducing-bacteria-efficiency-and-process
#18
Weihua Peng, Xiaomin Li, Tong Liu, Yingying Liu, Jinqian Ren, Dawei Liang, Wenhong Fan
Sulfate reducing bacteria (SRB) was used to stabilize cadmium (Cd) in sediments spiked with Cd. The study found that the Cd in sediments (≤600 mg kg-1 ) was successfully stabilized after 166 d SRB bio-treatment. This was verified by directly and indirectly examining Cd speciation in sediments, mobilization index, and Cd content in interstitial water. After 166 d bio-treatment, compared with control groups, Cd concentrations in interstitial water of Cd-spiked sediments were reduced by 77.6-96.4%. The bioavailable fractions of Cd (e...
March 1, 2018: Chemosphere
https://www.readbyqxmd.com/read/29547738/corrosion-behavior-of-x65-steel-in-seawater-containing-sulfate-reducing-bacteria-under-aerobic-conditions
#19
Qiushi Li, Jihui Wang, Xuteng Xing, Wenbin Hu
The corrosion behavior of X65 steel was investigated in the seawater inoculated with sulfate reducing bacteria (SRB) under the aerobic environment by electrochemical impedance techniques and immersion tests. The corroded morphologies and the composition of the corrosion products were investigated. The variation of the solution parameters including the bacterium number, the pH value and the soluble iron concentration were also investigated. The results indicated that in the SRB-containing system, the impedance responses presented a depressed semi-circle in the initial period, which then turned into the blocked electrode characteristic during the later immersion...
March 11, 2018: Bioelectrochemistry
https://www.readbyqxmd.com/read/29536876/hydrogen-sulfide-formation-control-and-microbial-competition-in-batch-anaerobic-digestion-of-slaughterhouse-wastewater-sludge-effect-of-initial-sludge-ph
#20
Li Yan, Jie Ye, Panyue Zhang, Dong Xu, Yan Wu, Jianbo Liu, Haibo Zhang, Wei Fang, Bei Wang, Guangming Zeng
High sulfur content in excess sludge impacts the production of biomethane during anaerobic digestion, meanwhile leads to hydrogen sulfide (H2 S) formation in biogas. Effect of initial sludge pH on H2 S formation during batch mesophilic anaerobic digestion of slaughterhouse wastewater sludge was studied in this paper. The results demonstrated that when the initial sludge pH increased from 6.5 to 8.0, the biogas production increased by 10.1%, the methane production increased by 64.1%, while the H2 S content in biogas decreased by 44...
March 6, 2018: Bioresource Technology
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