keyword
https://read.qxmd.com/read/24023388/proton-dependent-gating-and-proton-uptake-by-wzx-support-o-antigen-subunit-antiport-across-the-bacterial-inner-membrane
#21
JOURNAL ARTICLE
Salim T Islam, Paul D W Eckford, Michelle L Jones, Timothy Nugent, Christine E Bear, Christian Vogel, Joseph S Lam
Wzx flippases are crucial for bacterial cell surface polysaccharide assembly as they transport undecaprenyl pyrophosphate-linked sugar repeat units from the cytoplasmic to the periplasmic leaflets of the inner membrane (IM) for final assembly. Our recently reported three-dimensional (3D) model structure of Wzx from Pseudomonas aeruginosa PAO1 (WzxPa) displayed a cationic internal vestibule and functionally essential acidic amino acids within transmembrane segment bundles. Herein, we examined the intrinsic transport function of WzxPa following its purification and reconstitution in phospholipid liposomes...
September 10, 2013: MBio
https://read.qxmd.com/read/23416996/genetic-analysis-of-capsular-polysaccharide-synthesis-gene-clusters-from-all-serotypes-of-streptococcus-suis-potential-mechanisms-for-generation-of-capsular-variation
#22
JOURNAL ARTICLE
Masatoshi Okura, Daisuke Takamatsu, Fumito Maruyama, Takashi Nozawa, Ichiro Nakagawa, Makoto Osaki, Tsutomu Sekizaki, Marcelo Gottschalk, Yumi Kumagai, Shigeyuki Hamada
Streptococcus suis strains are classified into 35 serotypes on the basis of the antigenicity of their capsular polysaccharides (CPs). CP synthesis genes are known to be clustered on the chromosome (cps gene cluster). The entire cps gene clusters of S. suis have so far been sequenced in 15 serotypes and found to be located between orfZ and aroA. In this study, to provide comprehensive information about S. suis CPs, we sequenced the entire cps gene clusters of the remaining serotypes and analyzed the complete set of S...
April 2013: Applied and Environmental Microbiology
https://read.qxmd.com/read/23163869/structural-serological-and-genetic-characterization-of-the-o-antigen-of-providencia-alcalifaciens-o40
#23
JOURNAL ARTICLE
Olga G Ovchinnikova, Bin Liu, Dan Guo, Nina A Kocharova, Magdalena Bialczak-Kokot, Alexander S Shashkov, Lu Feng, Antoni Rozalski, Lei Wang, Yuriy A Knirel
The O-polysaccharide chain of the lipopolysaccharide (O-antigen) on the bacterial cell surface is one of the most structurally variable cell components and serves as a basis for serotyping of Gram-negative bacteria, including human opportunistic pathogens of the genus Providencia. In this work, the O-antigen of Providencia alcalifaciens O40 was obtained by mild acid degradation of the isolated lipopolysaccharide and studied by chemical methods and high-resolution NMR spectroscopy. The following structure of the O-polysaccharide was established: →4)-β-D-Quip3NFo-(1→3)-α-D-Galp-(1→3)-β-D-GlcpA-(1→3)-β-D-GalpNAc-(1→, where GlcA stands for glucuronic acid and Qui3NFo for 3,6-dideoxy-3-formamidoglucose...
December 2012: FEMS Immunology and Medical Microbiology
https://read.qxmd.com/read/23016929/wzx-flippase-mediated-membrane-translocation-of-sugar-polymer-precursors-in-bacteria
#24
REVIEW
Salim T Islam, Joseph S Lam
Bacterial cell surface polysaccharides confer resistance to external stress and promote survival in biotic and abiotic environments. Glycan assembly often occurs at the periplasmic leaflet of the inner membrane (IM) from undecaprenyl pyrophosphate (UndPP)-linked polysaccharide units via the Wzx/Wzy-dependent pathway. Wzx is an integral IM protein found in Gram-negative and Gram-positive bacteria that mediates IM translocation of UndPP-linked sugar repeats from the cytoplasmic to the periplasmic leaflet; interaction of Wzx with other assembly proteins is indirectly supported by genetic evidence...
April 2013: Environmental Microbiology
https://read.qxmd.com/read/22966833/structural-serological-and-genetic-characterization-of-the-o-antigen-of-providencia-alcalifaciens-o40
#25
Olga G Ovchinnikova, Bin Liu, Dan Guo, Nina A Kocharova, Magdalena Bialczak-Kokot, Alexander S Shashkov, Lu Feng, Antoni Rozalski, Lei Wang, Yuriy A Knirel
The O-polysaccharide chain of the lipopolysaccharide (O-antigen) on the bacterial cell surface is one of the most structurally variable cell components and serves as a basis for serotyping of Gram-negative bacteria, including human opportunistic pathogens of the genus Providencia. In this work, the O-antigen of Providencia alcalifaciens O40 was obtained by mild acid degradation of the isolated lipopolysaccharide and studied by chemical methods and high-resolution NMR spectroscopy. The following structure of the O-polysaccharide was established: →4)-β-d-Quip3NFo-(1→3)-α-d-Galp-(1→3)-β-d-GlcpA-(1→3)-β-d-GalpNAc-(1→, where GlcA stands for glucuronic acid and Qui3NFo for 3,6-dideoxy-3-formamidoglucose...
September 12, 2012: FEMS Immunology and Medical Microbiology
https://read.qxmd.com/read/22750201/aglr-is-required-for-addition-of-the-final-mannose-residue-of-the-n-linked-glycan-decorating-the-haloferax-volcanii-s-layer-glycoprotein
#26
JOURNAL ARTICLE
Lina Kaminski, Ziqiang Guan, Mehtap Abu-Qarn, Zvia Konrad, Jerry Eichler
BACKGROUND: Recent studies of Haloferax volcanii have begun to elucidate the steps of N-glycosylation in Archaea, where this universal post-translational modification remains poorly described. In Hfx. volcanii, a series of Agl proteins catalyzes the assembly and attachment of a N-linked pentasaccharide to the S-layer glycoprotein. Although roles have been assigned to the majority of Agl proteins, others await description. In the following, the contribution of AglR to N-glycosylation was addressed...
October 2012: Biochimica et Biophysica Acta
https://read.qxmd.com/read/22554073/a-cationic-lumen-in-the-wzx-flippase-mediates-anionic-o-antigen-subunit-translocation-in-pseudomonas-aeruginosa-pao1
#27
JOURNAL ARTICLE
Salim T Islam, Robert J Fieldhouse, Erin M Anderson, Véronique L Taylor, Robert A B Keates, Robert C Ford, Joseph S Lam
Heteropolymeric B-band O-antigen (O-Ag) biosynthesis in Pseudomonas aeruginosa PAO1 follows the Wzy-dependent pathway, beginning with translocation of undecaprenyl pyrophosphate-linked anionic O-Ag subunits (O units) from the inner to the outer leaflets of the inner membrane (IM). This translocation is mediated by the integral IM flippase Wzx. Through experimentally based and unbiased topological mapping, our group previously observed that Wzx possesses many charged and aromatic amino acid residues within its 12 transmembrane segments (TMS)...
June 2012: Molecular Microbiology
https://read.qxmd.com/read/21548768/detection-of-shiga-toxin-producing-escherichia-coli-o26-o45-o103-o111-o113-o121-o145-and-o157-serogroups-by-multiplex-polymerase-chain-reaction-of-the-wzx-gene-of-the-o-antigen-gene-cluster
#28
JOURNAL ARTICLE
Chitrita DebRoy, Elisabeth Roberts, Angela M Valadez, Edward G Dudley, Catherine N Cutter
O-antigens on the surface of Escherichia coli are important virulence factors that are targets of both the innate and adaptive immune system and play a major role in pathogenicity. O-antigens that are responsible for antigenic specificity of the strain determine the O-serogroup. E. coli O26, O45, O103, O111, O113, O121, O145, and O157 have been the most commonly identified O-serogroups associated with Shiga toxin-producing E. coli (STEC) implicated in outbreaks of human illness all over the world. A multiplex polymerase chain reaction assay was developed to simultaneously detect the eight STEC O-serogroups targeting the wzx (O-antigen-flippase) genes of all O-antigen gene clusters...
May 2011: Foodborne Pathogens and Disease
https://read.qxmd.com/read/20871101/analogies-and-homologies-in-lipopolysaccharide-and-glycoprotein-biosynthesis-in-bacteria
#29
REVIEW
Isabelle Hug, Mario F Feldman
Bacteria generate and attach countless glycan structures to diverse macromolecules. Despite this diversity, the mechanisms of glycoconjugate biosynthesis are often surprisingly similar. The focus of this review is on the commonalities between lipopolysaccharide (LPS) and glycoprotein assembly pathways and their evolutionary relationship. Three steps that are essential for both pathways are completed by membrane proteins. These include the initiation of glycan assembly through the attachment of a first sugar residue onto the lipid carrier undecaprenyl pyrophosphate, the translocation across the plasma membrane and the final transfer onto proteins or lipid A-core...
February 2011: Glycobiology
https://read.qxmd.com/read/20829291/twenty-eight-divergent-polysaccharide-loci-specifying-within-and-amongst-strain-capsule-diversity-in-three-strains-of-bacteroides-fragilis
#30
JOURNAL ARTICLE
Sheila Patrick, Garry W Blakely, Simon Houston, Jane Moore, Valerie R Abratt, Marcelo Bertalan, Ana M Cerdeño-Tárraga, Michael A Quail, Nicola Corton, Craig Corton, Alexandra Bignell, Andrew Barron, Louise Clark, Stephen D Bentley, Julian Parkhill
Comparison of the complete genome sequence of Bacteroides fragilis 638R, originally isolated in the USA, was made with two previously sequenced strains isolated in the UK (NCTC 9343) and Japan (YCH46). The presence of 10 loci containing genes associated with polysaccharide (PS) biosynthesis, each including a putative Wzx flippase and Wzy polymerase, was confirmed in all three strains, despite a lack of cross-reactivity between NCTC 9343 and 638R surface PS-specific antibodies by immunolabelling and microscopy...
November 2010: Microbiology
https://read.qxmd.com/read/20824106/membrane-topology-mapping-of-the-o-antigen-flippase-wzx-polymerase-wzy-and-ligase-waal-from-pseudomonas-aeruginosa-pao1-reveals-novel-domain-architectures
#31
JOURNAL ARTICLE
Salim T Islam, Véronique L Taylor, Meng Qi, Joseph S Lam
Biosynthesis of B-band lipopolysaccharide (LPS) in Pseudomonas aeruginosa follows the Wzy-dependent pathway, requiring the integral inner membrane proteins Wzx (O-antigen [O-Ag] flippase), Wzy (O-Ag polymerase), and WaaL (O-Ag ligase). For an important first step in deciphering the mechanisms of LPS assembly, we set out to map the membrane topology of these proteins. Random and targeted 3'wzx, wzy, and waaL truncations were fused to a phoA-lacZalpha dual reporter capable of displaying both alkaline phosphatase and beta-galactosidase activity...
August 24, 2010: MBio
https://read.qxmd.com/read/20638049/structural-and-genetic-characterization-of-the-o-antigen-of-salmonella-enterica-o56-containing-a-novel-derivative-of-4-amino-4-6-dideoxy-d-glucose
#32
JOURNAL ARTICLE
Andrei V Perepelov, Bin Liu, Sergei D Shevelev, Sof'ya N Senchenkova, Bo Hu, Alexander S Shashkov, Lu Feng, Yuriy A Knirel, Lei Wang
Based on the O-antigens (O-polysaccharides), one of the most variable cell constituents, 46 O-serogroups have been recognized in the Kauffmann-White serotyping scheme for Salmonella enterica. In this work, the structure of the O-polysaccharide and the genetic organization of the O-antigen gene cluster of S. enterica O56 were investigated. As judged by sugar and methylation analyses, along with NMR spectroscopic data, the O-polysaccharide has a linear tetrasaccharide O-unit, which consists of one residue each of d-ribofuranose, N-acetyl-d-glucosamine, N-acetyl-d-galactosamine, and a novel sugar derivative, 4-(N-acetyl-l-seryl)amino-4,6-dideoxy-d-glucose (d-Qui4NSerAc)...
September 3, 2010: Carbohydrate Research
https://read.qxmd.com/read/20510395/structural-and-genetic-characterization-of-the-o-antigen-of-escherichia-coli-o161-containing-a-derivative-of-a-higher-acidic-diamino-sugar-legionaminic-acid
#33
JOURNAL ARTICLE
Xiaomin Li, Andrei V Perepelov, Quan Wang, Sof'ya N Senchenkova, Bin Liu, Sergei D Shevelev, Xi Guo, Alexander S Shashkov, Wei Chen, Lei Wang, Yuriy A Knirel
The O-antigen is an essential component of lipopolysaccharide on the surface of Gram-negative bacteria and plays an important role in its pathogenicity. Composition and structure of the O-antigens of Escherichia coli are highly diverse mainly due to genetic variations in the O-antigen gene cluster. In this work, the chemical structure and the gene cluster of the O-antigen of E. coli O161 were studied. Chemical degradations, sugar analyses, and NMR spectroscopy showed that the O161 antigen possesses a trisaccharide O-repeating unit containing a 5-N-acetyl-7-N-(d-alanyl) derivative of 5,7-diamino-3,5,7,9-tetradeoxy-d-glycero-d-galacto-non-2-ulosonic (legionaminic) acid (Leg5Ac7Ala) and having the following structure: The O-antigen gene cluster of E...
July 19, 2010: Carbohydrate Research
https://read.qxmd.com/read/20453897/escherichia-coli-serogroup-o2-and-o28ac-o-antigen-gene-cluster-sequences-and-detection-of-pathogenic-e-coli-o2-and-o28ac-by-pcr
#34
JOURNAL ARTICLE
Pina M Fratamico, Xianghe Yan, Yanhong Liu, Chitrita DebRoy, Brian Byrne, Aine Monaghan, Seamus Fanning, Declan Bolton
The O-antigen gene clusters of Escherichia coli serogroups O2 and O28ac were sequenced, and PCR assays were developed to identify strains belonging to these 2 serogroups. Sixteen and 8 open reading frames were mapped to these loci in E. coli O2:H4 U 9-41 and E. coli O28ac:H25 96-3286, respectively. The wzx (O-antigen flippase) and wzy (O-antigen polymerase) genes in the E. coli O2 and O28ac O-antigen gene clusters were selected as targets for PCR assays for their identification. PCR assays targeting the wzx and wzy genes were specific for these serogroups, with one exception...
April 2010: Canadian Journal of Microbiology
https://read.qxmd.com/read/20075111/new-enterovirulent-escherichia-coli-serogroup-64474-showing-antigenic-and-genotypic-relationships-to-shigella-boydii-16
#35
JOURNAL ARTICLE
Armando Navarro, Carlos Eslava, Luis Manuel Perea, Alma Inzunza, Gabriela Delgado, Rosario Morales-Espinosa, Thomas Cheasty, Alejandro Cravioto
Studies based on the analysis of housekeeping genes indicate that Escherichia coli and all Shigella species, except for Shigella boydii type 13, belong to a single species. This study analysed the phenotypic and genotypic characteristics of 23 E. coli strains isolated in different countries from faecal specimens taken from children with diarrhoea. Strains were identified using the VITEK system and typed with rabbit sera obtained against 186 somatic and 53 flagellar E. coli antigens and against 45 Shigella somatic antigens...
April 2010: Journal of Medical Microbiology
https://read.qxmd.com/read/19435408/pcr-detection-of-enterohemorrhagic-escherichia-coli-o145-in-food-by-targeting-genes-in-the-e-coli-o145-o-antigen-gene-cluster-and-the-shiga-toxin-1-and-shiga-toxin-2-genes
#36
JOURNAL ARTICLE
Pina M Fratamico, Chitrita DebRoy, Takahisa Miyamoto, Yanhong Liu
Shiga toxin-producing Escherichia coli (STEC) strains belonging to serogroup O145 are an important cause of hemorrhagic colitis and hemolytic uremic syndrome worldwide. Cattle and other animals are potential reservoirs for this pathogen. To develop PCR assays for detection and identification of E. coli O145, the wzx (O-antigen flippase) and wzy (O-antigen polymerase) genes in the O145 O-antigen gene cluster that are specific for this serogroup were selected as targets. Oligonucleotide primers complementary to regions in the E...
June 2009: Foodborne Pathogens and Disease
https://read.qxmd.com/read/19218387/an-aeromonas-caviae-genomic-island-is-required-for-both-o-antigen-lipopolysaccharide-biosynthesis-and-flagellin-glycosylation
#37
JOURNAL ARTICLE
S Mohammed B Tabei, Paul G Hitchen, Michaela J Day-Williams, Susana Merino, Richard Vart, Poh-Choo Pang, Gavin J Horsburgh, Silvia Viches, Markus Wilhelms, Juan M Tomás, Anne Dell, Jonathan G Shaw
Aeromonas caviae Sch3N possesses a small genomic island that is involved in both flagellin glycosylation and lipopolysaccharide (LPS) O-antigen biosynthesis. This island appears to have been laterally acquired as it is flanked by insertion element-like sequences and has a much lower G+C content than the average aeromonad G+C content. Most of the gene products encoded by the island are orthologues of proteins that have been shown to be involved in pseudaminic acid biosynthesis and flagellin glycosylation in both Campylobacter jejuni and Helicobacter pylori...
April 2009: Journal of Bacteriology
https://read.qxmd.com/read/18700154/characterization-of-escherichia-coli-o3-and-o21-o-antigen-gene-clusters-and-development-of-serogroup-specific-pcr-assays
#38
JOURNAL ARTICLE
Yi Ren, Bin Liu, Jiansong Cheng, Fenxia Liu, Lu Feng, Lei Wang
Escherichia coli O3 and O21 are associated with enteroaggregative E. coli (EAEC). EAEC strains are often non-typable using the routine agglutination method due to their aggregative phenotype. Typing of E. coli O3 and O21 may also be impeded by cross-reactions with O152 or O83. In this study, the O antigen gene clusters of E. coli O3 and O21 were characterized, and PCR assays based on O antigen specific genes wzx (encoding O unit flippase) and wzy (encoding O unit polymerase) from each strain were developed...
October 2008: Journal of Microbiological Methods
https://read.qxmd.com/read/18673069/dna-sequencing-and-identification-of-serogroup-specific-genes-in-the-escherichia-coli-o118-o-antigen-gene-cluster-and-demonstration-of-antigenic-diversity-but-only-minor-variation-in-dna-sequence-of-the-o-antigen-clusters-of-e-coli-o118-and-o151
#39
COMPARATIVE STUDY
Yanhong Liu, Pina Fratamico, Chitrita Debroy, Alyssa C Bumbaugh, John W Allen
The DNA sequence of the O antigen gene cluster of an Escherichia coli serogroup O118 strain was determined, and 13 open reading frames (ORFs) were identified, encoding genes required for O antigen sugar biosynthesis, transfer, and processing. Polymerase chain reaction (PCR) assays targeting the wzx (O antigen flippase) and wzy (O antigen polymerase) genes in the O antigen gene cluster of E. coli O118 were designed for identification of these serogroups. Specificity testing using strains belonging to E. coli O118 isolated from various sources, representative strains of 167 other E...
August 2008: Foodborne Pathogens and Disease
https://read.qxmd.com/read/17322316/mutations-blocking-side-chain-assembly-polymerization-or-transport-of-a-wzy-dependent-streptococcus-pneumoniae-capsule-are-lethal-in-the-absence-of-suppressor-mutations-and-can-affect-polymer-transfer-to-the-cell-wall
#40
JOURNAL ARTICLE
Bobbi Xayarath, Janet Yother
Extracellular polysaccharides of many bacteria are synthesized by the Wzy polymerase-dependent mechanism, where long-chain polymers are assembled from undecaprenyl-phosphate-linked repeat units on the outer face of the cytoplasmic membrane. In gram-positive bacteria, Wzy-dependent capsules remain largely cell associated via membrane and peptidoglycan linkages. Like many Wzy-dependent capsules, the Streptococcus pneumoniae serotype 2 capsule is branched. In this study, we found that deletions of cps2K, cps2J, or cps2H, which encode a UDP-glucose dehydrogenase necessary for side chain synthesis, the putative Wzx transporter (flippase), and the putative Wzy polymerase, respectively, were obtained only in the presence of suppressor mutations...
May 2007: Journal of Bacteriology
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