keyword
https://read.qxmd.com/read/38627325/co-occurring-dominance-and-ideal-point-processes-a-general-irtree-framework-for-multidimensional-item-responding
#1
JOURNAL ARTICLE
Viola Merhof, Thorsten Meiser
Responding to rating scale items is a multidimensional process, since not only the substantive trait being measured but also additional personal characteristics can affect the respondents' category choices. A flexible model class for analyzing such multidimensional responses are IRTree models, in which rating responses are decomposed into a sequence of sub-decisions. Different response processes can be involved in item responding both sequentially across those sub-decisions and as co-occurring processes within sub-decisions...
April 16, 2024: Behavior Research Methods
https://read.qxmd.com/read/38582812/cancer-associated-fibroblasts-expressing-fibroblast-activation-protein-and-podoplanin-in-non-small-cell-lung-cancer-predict-poor-clinical-outcome
#2
JOURNAL ARTICLE
Layla Mathieson, Lilian Koppensteiner, David A Dorward, Richard A O'Connor, Ahsan R Akram
BACKGROUND: Cancer-associated fibroblasts (CAFs) are a dominant cell type in the stroma of non-small cell lung cancer (NSCLC). Fibroblast heterogeneity reflects subpopulations of CAFs, which can influence prognosis and treatment efficacy. We describe the subtypes of CAFs in NSCLC. METHODS: Primary human NSCLC resections were assessed by flow cytometry and multiplex immunofluorescence for markers of fibroblast activation which allowed identification of CAF subsets...
April 6, 2024: British Journal of Cancer
https://read.qxmd.com/read/38575707/ezh2-as-a-major-histone-methyltransferase-in-pdgf-bb-activated-orbital-fibroblast-in-the-pathogenesis-of-graves-ophthalmopathy
#3
JOURNAL ARTICLE
Sopita Visamol, Tanapat Palaga, Preamjit Saonanon, Vannakorn Pruksakorn, Nattiya Hirankarn, P Martin van Hagen, Willem A Dik, Sita Virakul
Graves' ophthalmopathy (GO) is an extra-thyroidal complication of Graves' disease which can lead to vision loss in severe cases. Currently, treatments of GO are not sufficiently effective, so novel therapeutic strategies are needed. As platelet-derived growth factor (PDGF)-BB induces several effector mechanisms in GO orbital fibroblasts including cytokine production and myofibroblast activation, this study aims to investigate the roles of histone lysine methyltransferases (HKMTs) in PDGF-BB-activated GO orbital fibroblasts by screening with HKMTs inhibitors library...
April 4, 2024: Scientific Reports
https://read.qxmd.com/read/38562133/case-report-trpv4-gene-mutation-causing-neuronopathy-distal-hereditary-motor-type-viii
#4
Fengge Wang, Xuemei Jin, Yongning Zhu, Shuli Jiang, Xiaoyan Zhang, Yanping Wang, Dongmei Man, Fuling Wang
Neuronopathy, distal hereditary motor, type VIII is an exceedingly rare autosomal dominant genetic disorder, also known as congenital non-progressive distal spinal muscular atrophy. It is characterized by progressive weakness in distal motor function and atrophy of muscles, without accompanying sensory impairment. Presently, there is limited literature on this condition, and accurate epidemiological data regarding its incidence remains unavailable. We report a paediatric case of distal hereditary motor, type VIII that is caused by a heterozygous missense mutation in the TRPV4 gene (NM_021625): c...
2024: Frontiers in Pediatrics
https://read.qxmd.com/read/38556551/cargo-specificity-regulation-and-therapeutic-potential-of-cytoplasmic-dynein
#5
REVIEW
Jin-Gyeong Park, Hanul Jeon, Kwang Yeon Hwang, Sun-Shin Cha, Rafael T Han, Hyesung Cho, In-Gyun Lee
Intracellular retrograde transport in eukaryotic cells relies exclusively on the molecular motor cytoplasmic dynein 1. Unlike its counterpart, kinesin, dynein has a single isoform, which raises questions about its cargo specificity and regulatory mechanisms. The precision of dynein-mediated cargo transport is governed by a multitude of factors, including temperature, phosphorylation, the microtubule track, and interactions with a family of activating adaptor proteins. Activating adaptors are of particular importance because they not only activate the unidirectional motility of the motor but also connect a diverse array of cargoes with the dynein motor...
April 1, 2024: Experimental & Molecular Medicine
https://read.qxmd.com/read/38552478/high-throughput-bcrp-inhibitors-screening-system-based-on-styrene-maleic-acid-polymer-membrane-protein-stabilization-strategy-and-surface-plasmon-resonance-biosensor
#6
JOURNAL ARTICLE
Jiahao Fang, Shuqi Shen, Hui Wang, Yuzhen He, Liang Chao, Yan Cao, Xiaofei Chen, Zhenyu Zhu, Zhanying Hong, Yifeng Chai
Multidrug resistance (MDR) is a dominant challenge in cancer chemotherapy failure. The over-expression of breast cancer resistance protein (BCRP) in tumorous cells, along with its extensive substrate profile, is a leading cause of tumor MDR. Herein, on the basis of styrene maleic acid (SMA) polymer membrane protein stabilization strategy and surface plasmon resonance (SPR) biosensor, a novel high-throughput screening (HTS) system for BCRP inhibitors has been established. Firstly, LLC-PK1 and LLC-PK1/BCRP cell membranes were co-incubated with SMA polymers to construct SMA lipid particles (SMALPs)...
March 23, 2024: Talanta
https://read.qxmd.com/read/38540236/fronto-cerebellar-diaschisis-and-cognitive-dysfunction-after-pontine-stroke-a-case-series-and-systematic-review
#7
REVIEW
Kei Shimmyo, Shigeru Obayashi
It is well known that cortical damage may affect cognitive functions, whereas subcortical damage, especially brainstem stroke, would be far less likely to cause cognitive decline, resulting in this condition being overlooked. Few studies have focused on cognitive dysfunction after a pontine stroke. Here, we begin with describing our nine new case reports of in-depth neuropsychological findings from patients with pontine stroke. The dominant domain of cognitive dysfunction was commonly characterized by executive dysfunction, almost in line with previous studies...
March 11, 2024: Biomedicines
https://read.qxmd.com/read/38538566/functional-analysis-of-cell-lines-derived-from-smad3-related-loeys-dietz-syndrome-patients-provides-insights-into-genotype-phenotype-relation
#8
JOURNAL ARTICLE
Nathalie P de Wagenaar, Lisa M van den Bersselaar, Hanny J H M Odijk, Sanne J M Stefens, Dieter P Reinhardt, Jolien W Roos-Hesselink, Roland Kanaar, Judith M A Verhagen, Hennie T Brüggenwirth, Ingrid M B H van de Laar, Ingrid van der Pluijm, Jeroen Essers
RATIONALE: Pathogenic (P)/likely pathogenic (LP) SMAD3 variants cause Loeys-Dietz syndrome type 3 (LDS3), which is characterized by arterial aneurysms, dissections and tortuosity throughout the vascular system combined with osteoarthritis. OBJECTIVES: Investigate the impact of P/LP SMAD3 variants with functional tests on patient-derived fibroblasts and vascular smooth muscle cells (VSMCs), to optimize interpretation of SMAD3 variants. METHODS: A retrospective analysis on clinical data from individuals with a P/LP SMAD3 variant and functional analyses on SMAD3 patient-derived VSMCs and SMAD3 patient-derived fibroblasts, differentiated into myofibroblasts...
March 27, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38534333/cd74-promotes-cyst-growth-and-renal-fibrosis-in-autosomal-dominant-polycystic-kidney-disease
#9
JOURNAL ARTICLE
Julie Xia Zhou, Alice Shasha Cheng, Li Chen, Linda Xiaoyan Li, Ewud Agborbesong, Vicente E Torres, Peter C Harris, Xiaogang Li
The progression of autosomal dominant polycystic kidney disease (ADPKD), an inherited kidney disease, is associated with renal interstitial inflammation and fibrosis. CD74 has been known not only as a receptor of macrophage migration inhibitory factor (MIF) it can also have MIF independent functions. In this study, we report unknown roles and function of CD74 in ADPKD. We show that knockout of CD74 delays cyst growth in Pkd1 mutant kidneys. Knockout and knockdown of CD74 (1) normalize PKD associated signaling pathways, including ERK, mTOR and Rb to decrease Pkd1 mutant renal epithelial cell proliferation, (2) decrease the activation of NF-κB and the expression of MCP-1 and TNF-alpha (TNF-α) which decreases the recruitment of macrophages in Pkd1 mutant kidneys, and (3) decrease renal fibrosis in Pkd1 mutant kidneys...
March 11, 2024: Cells
https://read.qxmd.com/read/38525787/multiple-ion-isolation-and-accumulation-events-for-selective-chemical-noise-reduction-and-dynamic-range-enhancement-in-maldi-imaging-mass-spectrometry
#10
JOURNAL ARTICLE
Troy R Scoggins, Jonathan T Specker, Boone M Prentice
Abundant chemical noise in MALDI imaging mass spectrometry experiments can impede the detection of less abundant compounds of interest. This chemical noise commonly originates from the MALDI matrix as well as other endogenous compounds present in high concentrations and/or with high ionization efficiencies. MALDI imaging mass spectrometry of biological tissues measures numerous biomolecular compounds that exist in a wide range of concentrations in vivo . When ion trapping instruments are used, highly abundant ions can dominate the charge capacity and lead to space charge effects that hinder the dynamic range and detection of lowly abundant compounds of interest...
March 25, 2024: Analyst
https://read.qxmd.com/read/38524764/-methylomonadaceae-was-the-active-and-dominant-methanotroph-in-tibet-lake-sediments
#11
JOURNAL ARTICLE
Yongcui Deng, Chulin Liang, Xiaomeng Zhu, Xinshu Zhu, Lei Chen, Hongan Pan, Fan Xun, Ye Tao, Peng Xing
Methane (CH4 ), an important greenhouse gas, significantly impacts the local and global climate. Our study focused on the composition and activity of methanotrophs residing in the lakes on the Tibetan Plateau, a hotspot for climate change research. Based on the field survey, the family Methylomonadaceae had a much higher relative abundance in freshwater lakes than in brackish and saline lakes, accounting for ~92% of total aerobic methanotrophs. Using the microcosm sediment incubation with 13 CH4 followed by high throughput sequencing and metagenomic analysis, we further demonstrated that the family Methylomonadaceae was actively oxidizing CH4 ...
January 2024: ISME Commun
https://read.qxmd.com/read/38470552/preimplantation-genetic-testing-for-monogenic-disorders-pgt-m-offers-an-alternative-strategy-to-prevent-children-from-being-born-with-hereditary-neurological-diseases-or-metabolic-diseases-dominated-by-nervous-system-phenotypes-a-retrospective-study
#12
JOURNAL ARTICLE
Weiwei Zou, Min Li, Xiaolei Wang, Hedong Lu, Yan Hao, Dawei Chen, Shasha Zhu, Dongmei Ji, Zhiguo Zhang, Ping Zhou, Yunxia Cao
BACKGROUND: Preimplantation genetic testing for monogenic disorders (PGT-M) is now widely used as an effective strategy to prevent various monogenic or chromosomal diseases. MATERIAL AND METHODS: In this retrospective study, couples with a family history of hereditary neurological diseases or metabolic diseases dominated by nervous system phenotypes and/or carrying the pathogenic genes underwent PGT-M to prevent children from inheriting disease-causing gene mutations from their parents and developing known genetic diseases...
March 12, 2024: Journal of Assisted Reproduction and Genetics
https://read.qxmd.com/read/38461796/transnet-cgp-a-cluster-based-comorbid-gene-prioritization-by-integrating-transcriptomics-and-network-topological-features
#13
JOURNAL ARTICLE
K R Saranya, E R Vimina, F R Pinto
The local disruptions caused by the genes of one disease can influence the pathways associated with the other diseases resulting in comorbidity. For gene therapies, it is necessary to prioritize the key genes that regulate common biological mechanisms to tackle the issues caused by overlapping diseases. This work proposes a clustering-based computational approach for prioritising the comorbid genes within the overlapping disease modules by analyzing Protein-Protein Interaction networks. For this, a sub-network with gene interactions of the disease pair was extracted from the interactome...
February 27, 2024: Computational Biology and Chemistry
https://read.qxmd.com/read/38376039/neural-correlates-of-fine-motor-grasping-skills-longitudinal-insights-into-motor-cortex-activation-using-fnirs
#14
JOURNAL ARTICLE
Xiaoli Li, Minxia Jin, Nan Zhang, Wei Hongman, LianHui Fu, Qi Qi
BACKGROUND: Motor learning is essential for performing specific tasks and progresses through distinct stages, including the rapid learning phase (initial skill acquisition), the consolidation phase (skill refinement), and the stable performance phase (skill mastery and maintenance). Understanding the cortical activation dynamics during these stages can guide targeted rehabilitation interventions. METHODS: In this longitudinal randomized controlled trial, functional near-infrared spectroscopy was used to explore the temporal dynamics of cortical activation in hand-related motor learning...
January 2024: Brain and Behavior
https://read.qxmd.com/read/38333019/patients-with-hemophagocytic-lymphohistiocytosis-who-need-intensive-care-can-be-successfully-rescued-by-timely-using-etoposide-based-hlh-regimens
#15
JOURNAL ARTICLE
Kebing Lv, Xiaoye Cheng, Yulan Zhou, Min Yu, Shixuan Wang, Huimin Shen, Fei Li
BACKGROUND: Hemophagocytic lymphohistiocytosis (HLH) patients who need intensive care usually have multiple organ failure and poor prognosis. However, the clinical characteristics, therapeutic efficacy and outcome in these critically ill HLH patients have remained unclear. METHODS: We performed a retrospective study of 50 critically ill HLH patients from September 2013 to October 2022. Patients' information was collected, and the overall survival rate was estimated...
2024: International Journal of General Medicine
https://read.qxmd.com/read/38325508/coinoculation-of-arbuscular-mycorrhizal-fungi-and-rhizobia-stimulates-atrazine-dissipation-by-changing-the-atrazine-degrading-bacterial-community-at-the-soil-aggregate-scale
#16
JOURNAL ARTICLE
Kai Zhang, Sisi Chen, Yuan Ping, Fuqiang Song, Xiaoxu Fan, Lidong Wang, Chen Zang
As a potential low-cost and environmentally friendly strategy, bioremediation of herbicide polluted soil has attracted increasing attention. However, there is a lack of knowledge regarding the response of the atrazine-degrading bacterial community to coinoculation of arbuscular mycorrhizal (AM) fungi and rhizobia for atrazine dissipation. In this study, a pot experiment was conducted with AM fungi Glomus mosseae (AM), rhizobia Rhizobium trifolii TA-1 (R) and their coinoculation (AMR) with atrazine. In each treatment, the atrazine-degrading bacterial community of four soil size aggregates, namely large macroaggregates (LMa), small macroaggregates (SMa), microaggregates (Mia) and primary particles (P) were investigated...
February 5, 2024: Environmental Pollution
https://read.qxmd.com/read/38324175/comprehensive-analysis-of-a-japanese-pedigree-with-biallelic-acagg-expansions-in-rfc1-manifesting-motor-neuronopathy-with-painful-muscle-cramps
#17
JOURNAL ARTICLE
Rumiko Izumi, Hitoshi Warita, Tetsuya Niihori, Yoshihiko Furusawa, Misa Nakano, Yasushi Oya, Kazuhiro Kato, Takuro Shiga, Kensuke Ikeda, Naoki Suzuki, Ichizo Nishino, Yoko Aoki, Masashi Aoki
Cerebellar ataxia, neuropathy, and vestibular areflexia syndrome (CANVAS) is an autosomal recessive multisystem neurologic disorder caused by biallelic intronic repeats in RFC1. Although the phenotype of CANVAS has been expanding via diagnostic case accumulation, there are scant pedigree analyses to reveal disease penetrance, intergenerational fluctuations in repeat length, or clinical phenomena (including heterozygous carriers). We identified biallelic RFC1 ACAGG expansions of 1000 ~ repeats in three affected siblings having sensorimotor neuronopathy with spinocerebellar atrophy initially presenting with painful muscle cramps and paroxysmal dry cough...
February 7, 2024: Cerebellum
https://read.qxmd.com/read/38284079/polyoxometalates-mediated-amyloid-fibrillation-dynamics-and-restoration-of-enzyme-activity-of-hen-egg-white-lysozyme-treated-under-cold-atmospheric-pressure-plasma
#18
JOURNAL ARTICLE
Kaberi Kalita, Shankab J Phukan, Somenath Garai, Kamatchi Sankaranarayanan
Neurodegenerative disorders are one of the most devastating disorders worldwide. Although a definite mechanistic pathway of neurodegenerative disorders is still not clear, it is almost clear that these diseases are initiated by protein misfolding. Hen Egg White Lysozyme (Lyz) can be converted to highly arranged amyloid fibrils and is therefore considered a good model protein for studying protein aggregation in connection to neurodegeneration. In this study, Lyz has been converted to fibrils using He-air gas fed single jet cold atmospheric plasma (CAP)...
January 23, 2024: ACS Omega
https://read.qxmd.com/read/38246283/impulsivity-and-neural-correlates-of-response-inhibition-in-bipolar-disorder-and-their-unaffected-relatives-a-meg-study
#19
JOURNAL ARTICLE
Yi Xia, Xiaoqin Wang, Wei You, Lingling Hua, Zhongpeng Dai, Hao Tang, Rui Yan, ZhiJian Yao, Qing Lu
BACKGROUND: Response inhibition is a core cognitive impairment in bipolar disorder (BD), leading to increased impulsivity in BD. However, the relationship between the neural mechanisms underlying impaired response inhibition and impulsivity in BD is not yet clear. Individuals who are genetically predisposed to BD give a way of identifying potential endophenotypes. METHODS: A total of 97 participants, including 39 patients with BD, 22 unaffected relatives (UR) of patients with BD, and 36 healthy controls performed a Go/No-Go task during magnetoencephalography...
January 19, 2024: Journal of Affective Disorders
https://read.qxmd.com/read/38204468/a-novel-heterozygous-de-novo-morc2-missense-variant-causes-an-early-onset-and-severe-neurodevelopmental-disorder
#20
Daniel Arbide, Nour Elkhateeb, Ewa Goljan, Carolina Perez Gonzalez, Anna Maw, Soo-Mi Park
Microrchidia CW-type zinc finger protein 2 (MORC2) is an ATPase-containing nuclear protein which regulates transcription through chromatin remodelling and epigenetic silencing. MORC2 may have a role in the development of neurones, and dominant variants in this gene have recently been linked with disorders including Charcot-Marie-Tooth type 2Z disease, spinal muscular atrophy and, more recently, a neurodevelopmental syndrome consisting of developmental delay, impaired growth, dysmorphic facies, and axonal neuropathy (DIGFAN), presenting with hypotonia, microcephaly, brain atrophy, intellectual disability, hearing loss, faltering growth, and craniofacial dysmorphism...
2024: Case Reports in Genetics
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