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https://www.readbyqxmd.com/read/28431420/generative-retrieval-improves-learning-and-retention-of-cardiac-anatomy-using-transesophageal-echocardiography
#1
Amanda M Kleiman, Katherine T Forkin, Allison J Bechtel, Stephen R Collins, Jennie Z Ma, Edward C Nemergut, Julie L Huffmyer
BACKGROUND: Transesophageal echocardiography (TEE) is a valuable monitor for patients undergoing cardiac and noncardiac surgery as it allows for evaluation of cardiovascular compromise in the perioperative period. It is challenging for anesthesiology residents and medical students to learn to use and interpret TEE in the clinical environment. A critical component of learning to use and interpret TEE is a strong grasp of normal cardiovascular ultrasound anatomy. METHODS: Fifteen fourth-year medical students and 15 post-graduate year (PGY) 1 and 2 anesthesiology residents without prior training in cardiac anesthesia or TEE viewed normal cardiovascular anatomy TEE video clips; participants were randomized to learning cardiac anatomy in generative retrieval (GR) and standard practice (SP) groups...
May 2017: Anesthesia and Analgesia
https://www.readbyqxmd.com/read/28431211/oxyuricassis-coronatus-n-gen-n-sp-and-o-hexaspinatus-n-sp-oxyurida-pharyngodonidae-parasites-of-lasiancistrus-saetiger-siluriformes-loricariidae-in-freshwater-rivers-of-the-brazilian-amazon
#2
Allan Rodrigo Oliveira Rodrigues, Jeannie Nascimentodos Santos, Adriano Penha Furtado, Francisco Tiago Vasconcelos Melo
A new nematode genus is described from intestines of Lasiancistrus saetiger Ambruster from freshwater rivers in the Brazilian Amazon. Oxyuricassis n. gen. is characterized by, a cephalic hood, buccal cavity small , long oesophagus with a well-developed isthmus and a conical tail with spines. Two new species are described: O. coronatus n. sp. is characterized by the absence of lateral alae, a conical tail with truncated extremity with sclerotized projections spine-like around the tail tip, male of O. coronatus has a caudal alae sucker-like...
April 21, 2017: Journal of Parasitology
https://www.readbyqxmd.com/read/28431154/physiological-characterization-of-a-halotolerant-anoxygenic-phototrophic-fe-ii-oxidizing-green-sulfur-bacterium-isolated-from-a-marine-sediment
#3
Katja Laufer, Annika Niemeyer, Verena Nikeleit, Maximilian Halama, James M Byrne, Andreas Kappler
Anoxygenic photoautotrophic bacteria which use light energy and electrons from Fe(II) for growth, so-called photoferrotrophs, are suggested to have been amongst the first phototrophic microorganisms on Earth and to have contributed to the deposition of sedimentary iron mineral deposits, i.e. banded iron formations. To date only two isolates of marine photoferrotrophic bacteria exist, both of which are closely related purple non-sulfur bacteria. Here we present a novel green-sulfur photoautotrophic Fe(II)-oxidizer isolated from a marine coastal sediment, Chlorobium sp...
April 18, 2017: FEMS Microbiology Ecology
https://www.readbyqxmd.com/read/28430273/the-interfacing-structural-effect-of-ag-graphene-oxide-nanohybrid-films-on-surface-enhanced-raman-scattering
#4
Young-Kwan Kim, Gyeongsik Ok, Sung-Wook Choi, Hongje Jang, Dal-Hee Min
The interfacing structural effect of Ag/graphene oxide (GO) nanohybrid films on SERS was investigated by using Ag nanostructures immobilized on polyallylamine hydrochloride (PAA) functionalized-GO and reduced GO (RGO) films. We found that the electron transfer from Ag nanostructures to GO derivatives dominantly occurred at the interfaces between Ag nanostructures and the sp(2) carbon domains of GO and RGO films. By utilizing 4-aminothiophenol (4-ATP) as a Raman probe, it was revealed that this electron transfer process augmented the enhancement factor (EF) of 4-ATP up to ∼1...
April 21, 2017: Nanoscale
https://www.readbyqxmd.com/read/28430188/interactions-between-soil-and-dead-wood-inhabiting-fungal-communities-during-the-decay-of-norway-spruce-logs
#5
Raisa Mäkipää, Tiina Rajala, Dmitry Schigel, Katja T Rinne, Taina Pennanen, Nerea Abrego, Otso Ovaskainen
We investigated the interaction between fungal communities of soil and dead wood substrates. For this, we applied molecular species identification and stable isotope tracking to both soil and decaying wood in an unmanaged boreal Norway spruce-dominated stand. Altogether, we recorded 1990 operational taxonomic units, out of which more than 600 were shared by both substrates and 589 were found to exclusively inhabit wood. On average the soil was more species-rich than the decaying wood, but the species richness in dead wood increased monotonically along the decay gradient, reaching the same species richness and community composition as soil in the late stages...
April 21, 2017: ISME Journal
https://www.readbyqxmd.com/read/28429458/genomic-evidence-for-population-specific-responses-to-coevolving-parasites-in-a-new-zealand-freshwater-snail
#6
Laura A Bankers, Peter Fields, Kyle E McElroy, Jeffrey L Boore, John M Logsdon, Maurine Neiman
Reciprocal coevolving interactions between hosts and parasites are a primary source of strong selection that can promote rapid and often population- or genotype-specific evolutionary change. These host-parasite interactions are also a major source of disease. Despite their importance, very little is known about the genomic basis of coevolving host-parasite interactions in natural populations, especially in animals. Here, we use gene expression and sequence evolution approaches to take critical steps towards characterizing the genomic basis of interactions between the freshwater snail Potamopyrgus antipodarum and its coevolving sterilizing trematode parasite, Microphallus sp...
April 21, 2017: Molecular Ecology
https://www.readbyqxmd.com/read/28429420/the-crystal-structure-of-a-new-o-demethylase-from-sphingobium-sp-strain-syk-6
#7
Ayaka Harada, Naofumi Kamimura, Koh Takeuchi, Hong Yang Yu, Eiji Masai, Toshiya Senda
In the cell, tetrahydrofolate derivatives with a C1 unit are utilized in various ways, such as for the synthesis of amino acids and nucleic acids. While tetrahydrofolate derivatives with the C1 unit are typically produced in the glycine cleavage system, Sphingobium sp. strain SYK-6, which can utilize lignin-derived aromatic compounds as a sole source of carbon and energy, lacks this pathway, probably due to its unique nutrient requirements. In this bacterium, tetrahydrofolate-dependent O-demethylases in catabolic pathways for lignin-derived aromatic compounds seem to be involved in the C1 metabolism...
April 20, 2017: FEBS Journal
https://www.readbyqxmd.com/read/28429172/a-new-species-of-haematoloechus-looss-1899-digenea-plagiorchioidea-haematoloechidae-a-parasite-of-rana-psilonota-webb-and-r-zweifeli-hillis-frost-webb-anura-ranidae-in-mexico
#8
Virginia León-Règagnon, Ángeles R Romero-Mayén
During an inventory of the helminths of amphibians in Mexico, specimens of an undescribed species of Haematoloechus Looss, 1899 (Digenea: Haematoloechidae) were collected from the lungs of frogs of the "tarahumarae" group in western México. Haematoloechus longicollum n. sp. differs from other known species of Haematoloechus by the combination of the following characters: body elongate and slender in the preovarian region and broad and blunt in the postovarian region, ovary separated from the ventral sucker more than twice the ovary length, oral sucker to pharynx length ratio 1:0...
April 20, 2017: Systematic Parasitology
https://www.readbyqxmd.com/read/28429169/nocardioides-suum-sp-nov-isolated-from-the-air-environment-in-an-indoor-pig-farm
#9
Siwon Lee, Wonseok Lee, Hyen-Mi Chung, Sangjung Park
A bacterial strain PBT33-2(T) was isolated from the air environment in an indoor pig farm. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain PBT33-2(T) belonged to the genus Nocardioides in the phylum Actinobacteria, and was most closely related to Nocardioides daphnia D287(T) in a maximum-likelihood and neighbor-joining phylogenetic trees. Strain PBT33-2(T) shared 95.3% sequence identity with N. daphnia D287(T). However, the highest sequence similarity was shown with N. sediminis MSL-01(T) (96...
April 20, 2017: Journal of Microbiology / the Microbiological Society of Korea
https://www.readbyqxmd.com/read/28429167/corynebacterium-defluvii-sp-nov-isolated-from-sewage
#10
Qiu-Li Yu, Zheng-Fei Yan, Xin He, Feng-Hua Tian, Chuan-Wen Jia, Chang-Tian Li
A Gram-positive, aerobic, non-motile, rod-shapeds, cata-lase-positive, and oxidase-negative strain, designated Y49(T), was isolated from sewage collected from Jilin Agricultural University, China. It grew at 20-40°C (optimum at 30°C), at pH 6.0-8.0 (optimum at 7.0) and at 0-1.0% sodium chloride (optimum at 0%). The major isoprenoid quinone was menaquinone-8 (MK-8) and the polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylmethylethanolamine, four unidentified lipids, and two unidentified aminolipids...
April 20, 2017: Journal of Microbiology / the Microbiological Society of Korea
https://www.readbyqxmd.com/read/28429108/phenetic-and-phylogenetic-relationships-among-aceria-spp-acari-eriophyoidea-inhabiting-species-within-the-family-brassicaceae-in-serbia
#11
Zlata Živković, Biljana Vidović, Vida Jojić, Tatjana Cvrković, Radmila Petanović
We examined morphological and genetic differences among Aceria spp. inhabiting six Brassicaceae species in Serbia. Five of them have been already mentioned in the literature as original or alternate hosts of Aceria spp. (Berteroa incana (L.) DC., Capsella bursa-pastoris (L.) Medik., Cardamine hirsuta L., Lepidium draba L. and Sisymbrium orientale L.), whereas Aurinia petraea (Ard.) Schur was registered here for the first time as a host for Aceria sp. Results of morphometric analyses indicated clear differentiation of Aceria spp...
April 20, 2017: Experimental & Applied Acarology
https://www.readbyqxmd.com/read/28428950/endogenous-and-exogenous-kdpf-peptide-increases-susceptibility-of-mycobacterium-bovis-bcg-to-nitrosative-stress-and-reduces-intramacrophage-replication
#12
Mariana Rosas Olvera, Eric Vivès, Virginie Molle, Anne-Béatrice Blanc-Potard, Laila Gannoun-Zaki
Emerging antibiotic resistance in pathogenic bacteria like Mycobacterium sp., poses a threat to human health and therefore calls for the development of novel antibacterial strategies. We have recently discovered that bacterial membrane peptides, such as KdpF, possess anti-virulence properties when overproduced in pathogenic bacterial species. Overproduction of the KdpF peptide in Mycobacterium bovis BCG decreased bacterial replication within macrophages, without presenting antibacterial activity. We propose that KdpF functions as a regulatory molecule and interferes with bacterial virulence, potentially through interaction with the PDIM transporter MmpL7...
2017: Frontiers in Cellular and Infection Microbiology
https://www.readbyqxmd.com/read/28428819/lipid-production-and-molecular-dynamics-simulation-for-regulation-of-accd-gene-in-cyanobacteria-under-different-n-and-p-regimes
#13
Roshan Kumar, Koushik Biswas, Puneet Kumar Singh, Pankaj Kumar Singh, Sanniyasi Elumalai, Pratyoosh Shukla, Sunil Pabbi
BACKGROUND: Microalgae grown under different nutrient deficient conditions present a good source of natural lipids with applications for several types of biofuels. The expression of acetyl-CoA carboxylase gene can further provide an insight to the mechanisms leading to enhanced lipid production under such stresses. In this study, two nutrients viz. nitrogen and phosphorus were modulated to see its effect on lipid productivity in selected cyanobacteria and its correlation with Accase followed by molecular dynamics simulation...
2017: Biotechnology for Biofuels
https://www.readbyqxmd.com/read/28428313/draft-genome-sequences-of-two-hydrogenogenic-carboxydotrophic-bacteria-carboxydocella-sp-strains-jdf658-and-ulo1-isolated-from-two-distinct-volcanic-fronts-in-japan
#14
Yuto Fukuyama, Tatsuki Oguro, Kimiho Omae, Yasuko Yoneda, Takashi Yoshida, Yoshihiko Sako
Hydrogenogenic carboxydotrophs may provide hydrogen as primary energy for the microbial community via carbon monoxide oxidation. To investigate the genetics of carbon monoxide metabolism, we report here the draft genome sequences of the hydrogenogenic carboxydotrophs Carboxydocella sp. strains JDF658 (2.60 Mbp; G+C content, 49.2%) and ULO1 (2.70 Mbp; G+C content, 48.8%).
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428303/genome-sequence-of-microbacterium-sp-strain-tpu-3598-a-lumichrome-producer
#15
Kazunori Yamamoto, Yasuhisa Asano
We report here the genome sequence of Microbacterium sp. strain TPU 3598, previously described as a producer of lumichrome. The sequenced genome size is 3,787,270 bp, the average G+C content is 68.39%, and 3,674 protein-coding sequences are predicted.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428289/draft-genome-sequence-of-methylocaldum-sp-strain-14b-an-obligate-hydrogen-sulfide-tolerant-methanotrophic-strain-that-can-convert-biogas-to-methanol
#16
Xiangdong Wei, Xumen Ge, Yebo Li, Zhongtang Yu
The draft genome sequence of Methylocaldum sp. 14B, an obligate methanotrophic strain isolated from solid-state anaerobic digestion systems, is reported here. Strain 14B possesses genes for methane oxidation and exhibited tolerance to H2S.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28427921/enhancement-of-ethyl-s-4-chloro-3-hydroxybutanoate-production-at-high-substrate-concentration-by-in-situ-resin-adsorption
#17
Li-Feng Chen, Hai-Yang Fan, Yi-Ping Zhang, Wei Wei, Jin-Ping Lin, Dong-Zhi Wei, Hua-Lei Wang
Asymmetric reduction of ethyl 4-chloro-3-oxobutyrate (COBE) by carbonyl reductases presents an efficient way to produce Ethyl (S)-4-chloro-3-hydroxybutanoate ((S)-CHBE), an important chiral intermediate for the synthesis of hydroxymethylglutaryl-CoA reductase inhibitors such as Lipitor(®). In this study, an NADPH-dependent carbonyl reductase (SrCR) from Synechocystis sp. was characterized to demonstrate a broad substrate spectrum, and the highest activity (53.1U/mg protein) with COBE. To regenerate the cofactor NADPH, Bacillus subtilis glucose dehydrogenase was successfully coexpressed with SrCR...
April 17, 2017: Journal of Biotechnology
https://www.readbyqxmd.com/read/28427920/genome-improvement-of-the-acarbose-producer-actinoplanes-sp-se50-110-and-annotation-refinement-based-on-rna-seq-analysis
#18
Timo Wolf, Susanne Schneiker-Bekel, Armin Neshat, Vera Ortseifen, Daniel Wibberg, Till Zemke, Alfred Pühler, Jörn Kalinowski
Actinoplanes sp. SE50/110 is the natural producer of acarbose, which is used in the treatment of diabetes mellitus type II. However, until now the transcriptional organization and regulation of the acarbose biosynthesis is only understood rudimentarily. The genome sequence of Actinoplanes sp. SE50/110 was known before, but was resequenced in this study to remove assembly artifacts and incorrect base callings. The annotation of the genome was refined in a multi-step approach, including modern bioinformatic pipelines, transcriptome and proteome data...
April 17, 2017: Journal of Biotechnology
https://www.readbyqxmd.com/read/28427689/demographic-and-clinical-profile-of-multiple-sclerosis-in-kashmir-a-short-report
#19
Insha Zahoor, Ravouf Asimi, Ehtishamul Haq, Irfan Yousuf Wani
BACKGROUND: Multiple sclerosis (MS) is a chronic autoimmune and inflammatory disease of the central nervous system (CNS). There have been only few population/hospital based studies on MS in India, and at the same time there is no data on its profile in Kashmir. METHODS: A total of 41 MS patients diagnosed on the basis of 2010 Revised Mc Donald criteria were enrolled in this study from Kashmir region of India. Clinical, demographic, radiological and biochemical parameters were analyzed for most of the patients...
April 2017: Multiple Sclerosis and related Disorders
https://www.readbyqxmd.com/read/28427478/morphological-and-molecular-characteristics-of-malayfilaria-sofiani-uni-mat-udin-takaoka-n-g-n-sp-nematoda-filarioidea-from-the-common-treeshrew-tupaia-glis-diard-duvaucel-mammalia-scandentia-in-peninsular-malaysia
#20
Shigehiko Uni, Ahmad Syihan Mat Udin, Takeshi Agatsuma, Weerachai Saijuntha, Kerstin Junker, Rosli Ramli, Hasmahzaiti Omar, Yvonne Ai-Lian Lim, Sinnadurai Sivanandam, Emilie Lefoulon, Coralie Martin, Daicus Martin Belabut, Saharul Kasim, Muhammad Rasul Abdullah Halim, Nur Afiqah Zainuri, Subha Bhassu, Masako Fukuda, Makoto Matsubayashi, Masashi Harada, Van Lun Low, Chee Dhang Chen, Narifumi Suganuma, Rosli Hashim, Hiroyuki Takaoka, Mohd Sofian Azirun
BACKGROUND: The filarial nematodes Wuchereria bancrofti (Cobbold, 1877), Brugia malayi (Brug, 1927) and B. timori Partono, Purnomo, Dennis, Atmosoedjono, Oemijati & Cross, 1977 cause lymphatic diseases in humans in the tropics, while B. pahangi (Buckley & Edeson, 1956) infects carnivores and causes zoonotic diseases in humans in Malaysia. Wuchereria bancrofti, W. kalimantani Palmieri, Pulnomo, Dennis & Marwoto, 1980 and six out of ten Brugia spp. have been described from Australia, Southeast Asia, Sri Lanka and India...
April 20, 2017: Parasites & Vectors
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