keyword
MENU ▼
Read by QxMD icon Read
search

Extraction and purification of membrane proteins

keyword
https://www.readbyqxmd.com/read/27847172/novel-systematic-detergent-screening-method-for-membrane-proteins-solubilization
#1
Elodie Desuzinges Mandon, Morgane Agez, Rebecca Pellegrin, Sébastien Igonet, Anass Jawhari
Membrane proteins play crucial role in many cellular processes including cell adhesion, cell-cell communication, signal transduction and transport. To better understand the molecular basis of such central biological machines and in order to specifically study their biological and medical role, it is necessary to extract them from their membrane environment. To do so, it is challenging to find the best solubilization condition. Here we describe, a systematic screening method called BMSS (Biotinylated Membranes Solubilization & Separation) that allow screening 96 conditions at once...
November 12, 2016: Analytical Biochemistry
https://www.readbyqxmd.com/read/27813588/purification-biochemical-characterization-and-antimicrobial-activity-of-a-new-lipid-transfer-protein-from-coffea-canephora-seeds
#2
G C V Bard, U Zottich, T A M Souza, S F F Ribeiro, G B Dias, S Pireda, M Da Cunha, R Rodrigues, L S Pereira, O L T Machado, A O Carvalho, V M Gomes
Coffee, an agronomical crop of great economic importance, is also among the most commonly traded commodities in worldwide markets. Antimicrobial peptides, which play a role in plant defense, have been identified and isolated particularly from seeds. We isolated and immunolocalized Cc-LTP2, a new lipid transfer protein (LTP) from Coffea canephora seeds. We report its antimicrobial activity against various phytopathogenic fungi of economic importance, and against the bacterium Xanthomonas euvesicatoria. Peptides from C...
October 24, 2016: Genetics and Molecular Research: GMR
https://www.readbyqxmd.com/read/27807400/aqueous-two-phase-system-atps-an-overview-and-advances-in-its-applications
#3
REVIEW
Mujahid Iqbal, Yanfei Tao, Shuyu Xie, Yufei Zhu, Dongmei Chen, Xu Wang, Lingli Huang, Dapeng Peng, Adeel Sattar, Muhammad Abu Bakr Shabbir, Hafiz Iftikhar Hussain, Saeed Ahmed, Zonghui Yuan
Aqueous two-phase system (ATPS) is a liquid-liquid fractionation technique and has gained an interest because of great potential for the extraction, separation, purification and enrichment of proteins, membranes, viruses, enzymes, nucleic acids and other biomolecules both in industry and academia. Although, the partition behavior involved in the method is complex and difficult to predict. Current research shows that it has also been successfully used in the detection of veterinary drug residues in food, separation of precious metals, sewage treatment and a variety of other purposes...
2016: Biological Procedures Online
https://www.readbyqxmd.com/read/27790201/changes-in-serological-immunology-measures-in-uk-and-kenyan-adults-post-controlled-human-malaria-infection
#4
Susanne H Hodgson, David Llewellyn, Sarah E Silk, Kathryn H Milne, Sean C Elias, Kazutoyo Miura, Gathoni Kamuyu, Elizabeth A Juma, Charles Magiri, Alfred Muia, Jing Jin, Alexandra J Spencer, Rhea J Longley, Thomas Mercier, Laurent Decosterd, Carole A Long, Faith H Osier, Stephen L Hoffman, Bernhards Ogutu, Adrian V S Hill, Kevin Marsh, Simon J Draper
Background: The timing of infection is closely determined in controlled human malaria infection (CHMI) studies, and as such they provide a unique opportunity to dissect changes in immunological responses before and after a single infection. The first Kenyan Challenge Study (KCS) (Pan African Clinical Trial Registry: PACTR20121100033272) was performed in 2013 with the aim of establishing the CHMI model in Kenya. This study used aseptic, cryopreserved, attenuated Plasmodium falciparum sporozoites administered by needle and syringe (PfSPZ Challenge) and was the first to evaluate parasite dynamics post-CHMI in individuals with varying degrees of prior exposure to malaria...
2016: Frontiers in Microbiology
https://www.readbyqxmd.com/read/27760404/an-improved-non-denaturing-method-for-the-purification-of-spiralin-the-main-membrane-lipoprotein-of-the-pathogenic-bacteria-spiroplasma-melliferum
#5
Yann Desfougères, Jean-Michel Poitou, Henri Wróblewski, Laure Béven
Spiralin is the most abundant protein of several species of spiroplasmas, helical, motile bacteria pathogenic for arthropods and plants. This amphiphilic protein is anchored to the outer face of the plasma membrane by a lipoylated N-terminal cysteine. Although spiroplasma pathogenicity in mammals is controversial, it was shown that spiralin is highly immunogenic and endowed with immunomodulatory activity. In this paper, we describe a high performance method for the purification of Spiroplasma melliferum spiralin under non-denaturing conditions...
October 12, 2016: Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences
https://www.readbyqxmd.com/read/27738959/in-vitro-kinetics-of-p700-reduction-of-thermosynechococcus-elongatus-trimeric-photosystem-i-complexes-by-recombinant-cytochrome-c-6-using-a-joliot-type-led-spectrophotometer
#6
Khoa Nguyen, Michael Vaughn, Paul Frymier, Barry D Bruce
The reduction rate of photo-oxidized Photosystem I (PSI) with various natural and artificial electron donors have been well studied by transient absorption spectroscopy. The electron transfer rate from various donors to P700(+) has been measured for a wide range of photosynthetic organisms encompassing cyanobacteria, algae, and plants. PSI can be a limiting component due to tedious extraction and purification methods required for this membrane protein. In this report, we have determined the in vivo, intracellular cytochrome c 6 (cyt c 6)/PSI ratio in Thermosynechococcus elongatus (T...
October 13, 2016: Photosynthesis Research
https://www.readbyqxmd.com/read/27735901/-creatine-kinase-isoform-b-distribution-in-the-brain-in-schizophrenia
#7
O K Savushkina, E B Tereshkina, T A Prokhorova, E A Vorob'eva, I S Boksha, G Sh Burbaeva
AIM: To compare patterns of brain isoform creatine phosphokinase (CPK B) distributions in post-mortem brain from patients with schizophrenia (Sch) and patients with somatic diseases (controls). MATERIAL AND METHODS: Extracts of readily soluble and membrane-associated proteins were prepared from post-mortem samples of prefrontal cortex (Brodmann area 10), anterior (area 24) and posterior (area 23) cingulate cortex, hippocampus and cerebellum cortex from patients with Sch and control group (the samples were matched by age and postmortem interval)...
2016: Zhurnal Nevrologii i Psikhiatrii Imeni S.S. Korsakova
https://www.readbyqxmd.com/read/27730612/isolation-of-plasmodesmata
#8
Christine Faulkner, Emmanuelle M F Bayer
Plasmodesmata (PD) are plasma membrane lined pores that cross the plant cell wall and connect adjacent cells. Plasmodesmata are composed of elements of the endoplasmic reticulum, plasma membrane, cytosol, and cell wall and thus, as multicomposite structures that are embedded in the cell wall, they are notoriously difficult to isolate from whole plant tissue. However, understanding PD structure, function, and regulation necessitates identification of their molecular components and therefore proteomic and lipidomic analyses of PD fractions are an essential strategy for plasmodesmal biology...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/27730565/strategies-for-the-purification-of-membrane-proteins
#9
Sinéad M Smith
Although membrane proteins account for approximately 30 % of the coding regions of all sequenced genomes and play crucial roles in many fundamental cell processes, there are relatively few membranes with known 3D structure. This is likely due to technical challenges associated with membrane protein extraction, solubilization, and purification. Membrane proteins are classified based on the level of interaction with membrane lipid bilayers, with peripheral membrane proteins associating noncovalently with the membrane, and integral membrane proteins associating more strongly by means of hydrophobic interactions...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/27694389/membrane-protein-extraction-and-purification-using-styrene-maleic-acid-sma-co-polymer-effect-of-variations-in-polymer-structure
#10
Kerrie A Morrison, Aneel Akram, Ashlyn Mathews, Zoeya A Khan, Jaimin H Patel, Chumin Zhou, David John Hardy, Charles Moore-Kelly, Roshani Patel, Victor Odiba, Tim Knowles, Masood-Ul-Hassan Javed, Nikola P Chmel, Timothy R Dafforn, Alice Jane Rothnie
The use of styrene maleic acid (SMA) co-polymers to extract and purify transmembrane proteins, whilst retaining their native bilayer environment, overcomes many of the disadvantages associated with conventional detergent based procedures. This approach has huge potential for the future of membrane protein structural and functional studies. In this investigation we have systematically tested a range of commercially available SMA polymers, varying in both the ratio of styrene to maleic acid and in total size, for the ability to extract, purify and stabilise transmembrane proteins...
September 30, 2016: Biochemical Journal
https://www.readbyqxmd.com/read/27680092/a-2s-albumin-from-the-seed-cake-of-ricinus-communis-inhibits-trypsin-and-has-strong-antibacterial-activity-against-human-pathogenic-bacteria
#11
Pedro F N Souza, Ilka M Vasconcelos, Fredy D A Silva, Frederico B Moreno, Ana C O Monteiro-Moreira, Luciana M R Alencar, Angélica S G Abreu, Jeanlex S Sousa, José T A Oliveira
Hospital-acquired infections caused by antibiotic-resistant bacteria threaten the lives of many citizens all over the world. Discovery of new agents to hinder bacterial development would have a significant impact on the treatment of infections. Here, the purification and characterization of Rc-2S-Alb, a protein that belongs to the 2S albumin family, from Ricinus communis seed cake, are reported. Rc-2S-Alb was purified after protein extraction with Tris-HCl buffer, pH 7.5, fractionation by ammonium sulfate (50-75%), and chromatography on Phenyl-Sepharose and DEAE-Sepharose...
September 28, 2016: Journal of Natural Products
https://www.readbyqxmd.com/read/27664631/understanding-leaf-membrane-protein-extraction-to-develop-a-food-grade-process
#12
Angelica Tamayo Tenorio, Remko M Boom, Atze Jan van der Goot
Leaf membrane proteins are an underutilised protein fraction for food applications. Proteins from leaves can contribute to a more complete use of resources and help to meet the increasing protein demand. Leaf protein extraction and purification is applied by other disciplines, such as proteomics. Therefore, this study analysed proteomic extraction methods for membrane proteins as an inspiration for a food-grade alternative process. Sugar beet leaves were extracted with two proteomic protocols: solvent extraction and Triton X-114 phase partitioning method...
February 15, 2017: Food Chemistry
https://www.readbyqxmd.com/read/27638141/the-development-of-a-weak-anion-micro-capillary-film-for-protein-chromatography
#13
A J M Kouyoumdjian, R A Lazar, N K H Slater
In this study, the surface of a microporous walled micro-capillary film (MMCF) was modified into a weak anion exchanger by coupling cyanuric chloride and 2-diethylaminoethylamine (DEAE) to the ethylene-vinyl alcohol (EVOH) matrix. Fourier transform infrared spectroscopy (FTIR) measurements of modified and unmodified MMCFs confirmed the addition of a triazine ring and DEAE onto the membrane. Binding of bovine serum albumin (BSA) at pH 7.2 was found to follow a Langmuir isotherm with a maximum equilibrium binding of 12...
October 14, 2016: Journal of Chromatography. A
https://www.readbyqxmd.com/read/27624811/a-rapid-and-efficient-luminescence-based-method-for-assaying-phosphoglycosyltransferase-enzymes
#14
Debasis Das, Marthe T C Walvoort, Vinita Lukose, Barbara Imperiali
Phosphoglycosyltransferases (PGTs) are families of integral membrane proteins with intriguingly diverse architectures. These enzymes function to initiate many important biosynthetic pathways including those leading to peptidoglycan, N-linked glycoproteins and lipopolysaccharide O-antigen. In spite of tremendous efforts, characterization of these enzymes remains a challenge not only due to the inherent difficulties associated with the purification of integral membrane proteins but also due to the limited availability of convenient assays...
September 14, 2016: Scientific Reports
https://www.readbyqxmd.com/read/27583823/novel-haemoglobin-derived-antimicrobial-peptides-from-chicken-gallus-gallus-blood-purification-structural-aspects-and-biological-activity
#15
A S Vasilchenko, E A Rogozhin, A V Vasilchenko, O L Kartashova, M V Sycheva
AIM: To purify and characterize antimicrobial peptides derived from the acid extract of Gallus gallus blood cells. METHODS AND RESULTS: Two polypeptides (i.e. CHb-1 and CHb-2) with antibacterial activity were detected in the acidic extract of blood cells from chicken (G. gallus). The isolated peptides that possessed a potent antibacterial activity were purified using a two-step chromatography procedure that involved solid-phase extraction of a total protein/peptide extract followed by thin fractionation by reversed-phase high performance liquid chromatography (RP-HPLC)...
December 2016: Journal of Applied Microbiology
https://www.readbyqxmd.com/read/27579043/investigation-of-the-cell-surface-proteome-of-human-periodontal-ligament-stem-cells
#16
Jimin Xiong, Danijela Menicanin, Peter S Zilm, Victor Marino, P Mark Bartold, Stan Gronthos
The present study examined the cell surface proteome of human periodontal ligament stem cells (PDLSC) compared to human fibroblasts. Cell surface proteins were prelabelled with CyDye before processing to extract the membrane lysates, which were separated using 2D electrophoresis. Selected differentially expressed protein "spots" were identified using Mass spectrometry. Four proteins were selected for validation: CD73, CD90, Annexin A2, and sphingosine kinase 1 previously associated with mesenchymal stem cells...
2016: Stem Cells International
https://www.readbyqxmd.com/read/27553232/detergents-in-membrane-protein-purification-and-crystallisation
#17
Anandhi Anandan, Alice Vrielink
Detergents play a significant role in structural and functional characterisation of integral membrane proteins (IMPs). IMPs reside in the biological membranes and exhibit a great variation in their structural and physical properties. For in vitro biophysical studies, structural and functional analyses, IMPs need to be extracted from the membrane lipid bilayer environment in which they are found and purified to homogeneity while maintaining a folded and functionally active state. Detergents are capable of successfully solubilising and extracting the IMPs from the membrane bilayers...
2016: Advances in Experimental Medicine and Biology
https://www.readbyqxmd.com/read/27528746/membrane-proteins-is-the-future-disc-shaped
#18
REVIEW
Sarah C Lee, Naomi L Pollock
The use of styrene maleic acid lipid particles (SMALPs) for the purification of membrane proteins (MPs) is a rapidly developing technology. The amphiphilic copolymer of styrene and maleic acid (SMA) disrupts biological membranes and can extract membrane proteins in nanodiscs of approximately 10 nm diameter. These discs contain SMA, protein and membrane lipids. There is evidence that MPs in SMALPs retain their native structures and functions, in some cases with enhanced thermal stability. In addition, the method is compatible with biological buffers and a wide variety of biophysical and structural analysis techniques...
August 15, 2016: Biochemical Society Transactions
https://www.readbyqxmd.com/read/27516321/structural-characterization-and-antiviral-effect-of-a-novel-polysaccharide-psp-2b-from-prunellae-spica
#19
Feng-Wei Ma, Si-Yuan Kong, Hong-Sheng Tan, Rong Wu, Bing Xia, Yan Zhou, Hong-Xi Xu
In the present study, a novel polysaccharide, PSP-2B, was isolated from aqueous extracts of Prunellae Spica by direct ultrafiltration membrane separation and gel chromatography purification. PSP-2B is a partially sulphated polysaccharide with a molecular weight of approximately 32kDa. Its sulfate content is 10.59% by elemental analysis. The major sugars comprising PSP-2B are arabinose, galactose and mannose, in addition to small amounts of glucose and uronic acids. The framework of PSP-2B is speculated to be a branched arabinogalactomannan, and the side chains are terminated primarily by the Araf residues...
November 5, 2016: Carbohydrate Polymers
https://www.readbyqxmd.com/read/27485341/detergent-free-membrane-protein-purification
#20
Alice J Rothnie
Membrane proteins are localized within a lipid bilayer; in order to purify them for functional and structural studies the first step must involve solubilizing or extracting the protein from these lipids. To date this has been achieved using detergents which disrupt the bilayer and bind to the protein in the transmembrane region. However finding conditions for optimal extraction, without destabilizing protein structure, is time consuming and expensive. Here we present a recently-developed method using a styrene-maleic acid (SMA) co-polymer instead of detergents...
2016: Methods in Molecular Biology
keyword
keyword
58871
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"