keyword
https://read.qxmd.com/read/38652839/integrative-phytochemical-ligand-structure-based-drug-design-nephroprotective-potential-of-annona-muricata-flower-petals
#1
JOURNAL ARTICLE
Zacchaeus S Ololade, Olayinka F Onifade, John C Eze, Olawumi T Oyebanji, Anikeola C Olaniran, Iyaduni A Anuoluwa, Oluwatope O Idowu, Bessie E Tommy
This study was aimed at investigating the ability of extract of Annona muricata (AM) flower-petals in ameliorating the toxic effects of acetaminophen on the kidneys of albino rats. The biochemical results showed a marked increase in AM 200 mg (32.84 ± 0.14) and AM 400 mg (32.64 ± 0.78). Increase levels of total protein in AM 200 mg (77.00 ± 5.65) displays nephroprotective potential of the flower extract. Reduction of renal activities of serum urea in AM 400 mg group (6...
April 23, 2024: Natural Product Research
https://read.qxmd.com/read/38652824/microphysiologically-engineered-vessel-tumor-model-to-investigate-vascular-transport-dynamics-of-immune-cells
#2
JOURNAL ARTICLE
Yuwen Zhao, Yue Wu, Khayrul Islam, Ratul Paul, Yuyuan Zhou, Xiaochen Qin, Qiying Li, Yaling Liu
Cancer immunotherapy has emerged as a promising therapeutic strategy to combat cancer effectively. However, it is hard to observe and quantify how this in vivo process happens. Three-dimensional (3D) microfluidic vessel-tumor models offer valuable capability to study how immune cells transport during cancer progression. We presented an advanced 3D vessel-supported tumor model consisting of the endothelial lumen and vessel network for the study of T cells' transportation. The process of T cell transport through the vessel network and interaction with tumor spheroids was represented and monitored in vitro...
April 23, 2024: ACS Applied Materials & Interfaces
https://read.qxmd.com/read/38652763/optogenetically-controlled-inflammasome-activation-demonstrates-two-phases-of-cell-swelling-during-pyroptosis
#3
JOURNAL ARTICLE
Julien Nadjar, Sylvain Monnier, Estelle Bastien, Anne-Laure Huber, Christiane Oddou, Léa Bardoulet, Hubert B Leloup, Gabriel Ichim, Christophe Vanbelle, Bénédicte F Py, Olivier Destaing, Virginie Petrilli
Inflammasomes are multiprotein platforms that control caspase-1 activation, which process the inactive precursor forms of the inflammatory cytokines IL-1β and IL-18, leading to an inflammatory type of programmed cell death called pyroptosis. Studying inflammasome-driven processes, such as pyroptosis-induced cell swelling, under controlled conditions remains challenging because the signals that activate pyroptosis also stimulate other signaling pathways. We designed an optogenetic approach using a photo-oligomerizable inflammasome core adapter protein, apoptosis-associated speck-like containing a caspase recruitment domain (ASC), to temporally and quantitatively manipulate inflammasome activation...
April 23, 2024: Science Signaling
https://read.qxmd.com/read/38652761/tnf-%C3%AE-signals-through-itk-akt-mtor-to-drive-cd4-t-cell-metabolic-reprogramming-which-is-dysregulated-in-rheumatoid-arthritis
#4
JOURNAL ARTICLE
Emma L Bishop, Nancy Gudgeon, Taylor Fulton-Ward, Victoria Stavrou, Jennie Roberts, Adam Boufersaoui, Daniel A Tennant, Martin Hewison, Karim Raza, Sarah Dimeloe
Upon activation, T cells undergo metabolic reprogramming to meet the bioenergetic demands of clonal expansion and effector function. Because dysregulated T cell cytokine production and metabolic phenotypes coexist in chronic inflammatory disease, including rheumatoid arthritis (RA), we investigated whether inflammatory cytokines released by differentiating T cells amplified their metabolic changes. We found that tumor necrosis factor-α (TNF-α) released by human naïve CD4+ T cells upon activation stimulated the expression of a metabolic transcriptome and increased glycolysis, amino acid uptake, mitochondrial oxidation of glutamine, and mitochondrial biogenesis...
April 23, 2024: Science Signaling
https://read.qxmd.com/read/38652684/expression-of-syo_1-56-sarp-regulator-unveils-potent-elasnin-derivatives-with-antibacterial-activity
#5
JOURNAL ARTICLE
Islam A Abdelhakim, Yushi Futamura, Yukihiro Asami, Hideaki Hanaki, Naoko Kito, Sachiko Masuda, Arisa Shibata, Atsuya Muranaka, Hiroyuki Koshino, Ken Shirasu, Hiroyuki Osada, Jun Ishikawa, Shunji Takahashi
Actinomycetes are prolific producers of natural products, particularly antibiotics. However, a significant proportion of its biosynthetic gene clusters (BGCs) remain silent under typical laboratory conditions. This limits the effectiveness of conventional isolation methods for the discovery of novel natural products. Genetic interventions targeting the activation of silent gene clusters are necessary to address this challenge. Streptomyces antibiotic regulatory proteins (SARPs) act as cluster-specific activators and can be used to target silent BGCs for the discovery of new antibiotics...
April 23, 2024: Journal of Natural Products
https://read.qxmd.com/read/38652683/chemical-genetics-in-c-elegans-identifies-anticancer-mycotoxins-chaetocin-and-chetomin-as-potent-inducers-of-a-nuclear-metal-homeostasis-response
#6
JOURNAL ARTICLE
Elijah Abraham, A M Gihan K Athapaththu, Kalina R Atanasova, Qi-Yin Chen, Taylor J Corcoran, Juan Piloto, Cheng-Wei Wu, Ranjala Ratnayake, Hendrik Luesch, Keith P Choe
C. elegans numr-1/2 (<u>nu</u>clear-localized <u>m</u>etal-<u>r</u>esponsive) is an identical gene pair encoding a nuclear protein previously shown to be activated by cadmium and disruption of the integrator RNA metabolism complex. We took a chemical genetic approach to further characterize regulation of this novel metal response by screening 41,716 compounds and extracts for numr-1p::GFP activation. The most potent activator was chaetocin, a fungal 3,6-epidithiodiketopiperazine (ETP) with promising anticancer activity...
April 23, 2024: ACS Chemical Biology
https://read.qxmd.com/read/38652662/isgylation-by-hercs-facilitates-sting-activation
#7
JOURNAL ARTICLE
Ying Qin, Min Wang, Xintong Meng, Mengge Wang, Haojia Jiang, Yanjie Gao, Jingxin Li, Chunyuan Zhao, Chaofeng Han, Wei Zhao, Xuexing Zheng
Optimal activation of stimulator of interferon genes (STING) protein is crucial for host defenses against pathogens and avoiding detrimental effects. Various post-translational modifications control STING activity. However, the function of interferon (IFN)-stimulated gene (ISG) 15 modification (ISGylation) in controlling STING stability and activation is unclear. Here, we show that the E3 ISGylation ligases HECT domain- and RCC1-like domain-containing proteins (HERCs; HERC5 in humans and HERC6 in mice) facilitate STING activation by mediating ISGylation of STING at K150, preventing its K48-linked ubiquitination and degradation...
April 21, 2024: Cell Reports
https://read.qxmd.com/read/38652661/systematic-characterization-of-multi-omics-landscape-between-gut-microbial-metabolites-and-gpcrome-in-alzheimer-s-disease
#8
JOURNAL ARTICLE
Yunguang Qiu, Yuan Hou, Dhruv Gohel, Yadi Zhou, Jielin Xu, Marina Bykova, Yuxin Yang, James B Leverenz, Andrew A Pieper, Ruth Nussinov, Jessica Z K Caldwell, J Mark Brown, Feixiong Cheng
Shifts in the magnitude and nature of gut microbial metabolites have been implicated in Alzheimer's disease (AD), but the host receptors that sense and respond to these metabolites are largely unknown. Here, we develop a systems biology framework that integrates machine learning and multi-omics to identify molecular relationships of gut microbial metabolites with non-olfactory G-protein-coupled receptors (termed the "GPCRome"). We evaluate 1.09 million metabolite-protein pairs connecting 408 human GPCRs and 335 gut microbial metabolites...
April 21, 2024: Cell Reports
https://read.qxmd.com/read/38652659/hsv-1-employs-ul56-to-antagonize-expression-and-function-of-cgamp-channels
#9
JOURNAL ARTICLE
Henry T W Blest, Alexander Redmond, Jed Avissar, Jake Barker, Anne Bridgeman, Gerissa Fowler, Lise Chauveau, Jonny Hertzog, Iolanda Vendrell, Roman Fischer, Marie B Iversen, Lichen Jing, David M Koelle, Søren R Paludan, Benedikt M Kessler, Colin M Crump, Jan Rehwinkel
DNA sensing is important for antiviral immunity. The DNA sensor cGAS synthesizes 2'3'-cyclic GMP-AMP (cGAMP), a second messenger that activates STING, which induces innate immunity. cGAMP not only activates STING in the cell where it is produced but cGAMP also transfers to other cells. Transporters, channels, and pores (including SLC19A1, SLC46A2, P2X7, ABCC1, and volume-regulated anion channels (VRACs)) release cGAMP into the extracellular space and/or import cGAMP. We report that infection with multiple human viruses depletes some of these cGAMP conduits...
April 22, 2024: Cell Reports
https://read.qxmd.com/read/38652652/downregulation-of-glis3-in-ins1-cells-exposed-to-chronically-elevated-glucose-contributes-to-glucotoxicity-associated-%C3%AE-cell-dysfunction
#10
JOURNAL ARTICLE
LilyAnne M Grieve, Abhya Rani, Gary T ZeRuth
Chronically elevated levels of glucose are deleterious to pancreatic β cells and contribute to β cell dysfunction, which is characterized by decreased insulin production and a loss of β cell identity. The Krüppel-like transcription factor, Glis3 has previously been shown to positively regulate insulin transcription and mutations within the Glis3 locus have been associated with the development of several pathologies including type 2 diabetes mellitus. In this report, we show that Glis3 is significantly downregulated at the transcriptional level in INS1 832/13 cells within hours of being subjected to high glucose concentrations and that diminished expression of Glis3 is at least partly attributable to increased oxidative stress...
December 31, 2024: Islets
https://read.qxmd.com/read/38652556/macrophage-derived-exosomal-mirna-141-triggers-endothelial-cell-pyroptosis-by-targeting-nlrp3-to-accelerate-sepsis-progression
#11
JOURNAL ARTICLE
Feng Zhan, Jun Zhang, Ping He, Wenteng Chen, Yanhong Ouyang
Sepsis, critical condition marked by severe organ dysfunction from uncontrolled infection, involves the endothelium significantly. Macrophages, through paracrine actions, play a vital role in sepsis, but their mechanisms in sepsis pathogenesis remain elusive. Objective: We aimed to explore how macrophage-derived exosomes with low miR-141 expression promote pyroptosis in endothelial cells (ECs). Exosomes from THP-1 cell supernatant were isolated and characterized. The effects of miR-141 mimic/inhibitor on apoptosis, proliferation, and invasion of Human Umbilical Vein Endothelial Cells (HUVECs) were assessed using flow cytometry, CCK-8, and transwell assays...
2024: International Journal of Immunopathology and Pharmacology
https://read.qxmd.com/read/38652514/egr1-promotes-nlrc4-dependent-neuronal-pyroptosis-through-phlda1-in-an-in-vitro-model-of-intracerebral-hemorrhage
#12
JOURNAL ARTICLE
Jian Wang, Diheng Gu, Ke Jin, Hualong Shen, Yaohua Qian
Intracerebral hemorrhage (ICH) is a fatal brain injury, but the current treatments for it are inadequate to reduce the severity of secondary brain injury. Our study aims to explore the molecular mechanism of Egr1 and Phlda1 in regulating hemin-induced neuronal pyroptosis, and hope to provide novel therapeutic targets for ICH treatment. Mouse hippocampal neuron cells treated with hemin were used to simulate an in-vitro ICH model. Using qRT-PCR and western blot to evaluate mRNA and protein concentrations. MTT assay was utilized to assess cell viability...
April 17, 2024: Neuroreport
https://read.qxmd.com/read/38652428/mycosporine-like-amino-acids-as-a-potential-inhibitor-of-tyrosinase-related-protein-1-computational-screening-pharmacokinetics-and-molecular-dynamics-simulation
#13
JOURNAL ARTICLE
Nasreen Amin, Vinay K Singh, Vinod K Kannaujiya
Melanin is the major pigment responsible for the coloring of mammalian skin, hair, and eyes to defend against ultraviolet radiation. However, excessive melanin production has resulted in numerous types of hyperpigmentation disorders. Tyrosinase-related protein 1 (TYRP1) is a transmembrane glycoprotein enzyme found in many organisms, including humans, that plays an important role in melanogenesis. Thus, controlling the enzyme activity of TYRP1 with tyrosinase inhibitors is a vital step in the treatment of hyperpigmentation problems in humans...
April 23, 2024: Molecular Biotechnology
https://read.qxmd.com/read/38652405/efficient-gene-editing-in-the-slow-growing-non-sporulating-melanized-endophytic-fungus-berkleasmium-sp-dzf12-using-a-crispr-cas9-system
#14
JOURNAL ARTICLE
Siji Zhao, Ruya Yin, Mengwei Zhang, Ziqi Zhai, Zhen Shen, Yan Mou, Dan Xu, Ligang Zhou, Daowan Lai
The endophytic fungus Berkleasmium sp. Dzf12 that was isolated from Dioscorea zingiberensis, is a proficient producer of palmarumycins, which are intriguing polyketides of the spirobisnaphthalene class. These compounds displayed a wide range of bioactivities, including antibacterial, antifungal, and cytotoxic activities. However, conventional genetic manipulation of Berkleasmium sp. Dzf12 is difficult and inefficient, partially due to the slow-growing, non-sporulating, and highly pigmented behavior of this fungus...
April 23, 2024: World Journal of Microbiology & Biotechnology
https://read.qxmd.com/read/38652401/suberanilohydroxamic-acid-saha-a-hdac-inhibitor-suppresses-the-effect-of-treg-cells-by-targeting-the-c-myc-ccl1-pathway-in-glioma-stem-cells-and-improves-pd-l1-blockade-therapy
#15
JOURNAL ARTICLE
Ting Sun, Bin Liu, Lize Cai, Youxin Zhou, Wei Yang, Yanyan Li
PURPOSE: A strong immunosuppressive tumor microenvironment (TME) represents the major barrier responsible for the failure of current immunotherapy approaches in treating Glioblastoma Multiforme (GBM). Within the TME, the regulatory T cells (Tregs) exert immunosuppressive effects on CD8+ T cell - mediated anti-cancer immune killing. Consequently, targeting and inhibiting their immunosuppressive function emerges as an effective therapeutic strategy for GBM. The present study aimed to investigate the mechanisms and effects of Suberanilohydroxamic Acid (SAHA), a histone deacetylase inhibitor, on immunosuppressive Tregs...
April 23, 2024: Journal of Neuro-oncology
https://read.qxmd.com/read/38652367/combined-effect-of-pantoprazole-and-mesenchymal-stem-cells-on-experimentally-induced-gastric-ulcer-implication-of-oxidative-stress-inflammation-and-apoptosis-pathways
#16
JOURNAL ARTICLE
Alaa H Sayed, Nadia S Mahmoud, Ola A M Mohawed, Hanaa H Ahmed
Gastric ulcer (GU) is one of the most common diseases of the upper gastrointestinal tract that affects millions of people worldwide. This study aimed to investigate the possible alleviating effect of a combined treatment of pantoprazole (PANTO) and adipose tissue-derived mesenchymal stem cells (ADSCs) in comparison with each treatment alone on the healing process of the experimentally induced GU in rats, and to uncover the involved pathways. Rats were divided into five groups: (1) Control, (2) GU, (3) PANTO, (4) ADSCs and (5) ADSCs + PANTO...
April 23, 2024: Inflammopharmacology
https://read.qxmd.com/read/38652325/the-%C3%AE-tubulin-acetyltransferase-atat1-structure-cellular-functions-and-its-emerging-role-in-human-diseases
#17
REVIEW
Angela Iuzzolino, Francesca Romana Pellegrini, Dante Rotili, Francesca Degrassi, Daniela Trisciuoglio
The acetylation of α-tubulin on lysine 40 is a well-studied post-translational modification which has been associated with the presence of long-lived stable microtubules that are more resistant to mechanical breakdown. The discovery of α-tubulin acetyltransferase 1 (ATAT1), the enzyme responsible for lysine 40 acetylation on α-tubulin in a wide range of species, including protists, nematodes, and mammals, dates to about a decade ago. However, the role of ATAT1 in different cellular activities and molecular pathways has been only recently disclosed...
April 23, 2024: Cellular and Molecular Life Sciences: CMLS
https://read.qxmd.com/read/38652315/flotillins-affect-lps-induced-tlr4-signaling-by-modulating-the-trafficking-and-abundance-of-cd14
#18
JOURNAL ARTICLE
Orest V Matveichuk, Anna Ciesielska, Aneta Hromada-Judycka, Natalia Nowak, Ichrak Ben Amore, Gabriela Traczyk, Katarzyna Kwiatkowska
Lipopolysaccharide (LPS) induces a strong pro-inflammatory reaction of macrophages upon activation of Toll-like receptor 4 (TLR4) with the assistance of CD14 protein. Considering a key role of plasma membrane rafts in CD14 and TLR4 activity and the significant impact exerted on that activity by endocytosis and intracellular trafficking of the both LPS acceptors, it seemed likely that the pro-inflammatory reaction could be modulated by flotillins. Flotillin-1 and -2 are scaffolding proteins associated with the plasma membrane and also with endo-membranes, affecting both the plasma membrane dynamics and intracellular protein trafficking...
April 23, 2024: Cellular and Molecular Life Sciences: CMLS
https://read.qxmd.com/read/38652220/ca1-modulates-the-osteogenic-differentiation-of-dental-follicle-stem-cells-by-activating-the-bmp-signaling-pathway-in-vitro
#19
JOURNAL ARTICLE
Jin-Ze Zhao, Ying-Ying Ge, Ling-Fa Xue, Yao-Xiang Xu, Jin Yue, Cong Li, Wen-Lin Xiao
BACKGROUND: Carbonic anhydrase 1 (CA1) has been found to be involved in osteogenesis and osteoclast in various human diseases, but the molecular mechanisms are not completely understood. In this study, we aim to use siRNA and lentivirus to reduce or increase the expression of CA1 in Dental follicle stem cells (DFSCs), in order to further elucidate the role and mechanism of CA1 in osteogenesis, and provide better osteogenic growth factors and stem cell selection for the application of bone tissue engineering in alveolar bone fracture transplantation...
April 23, 2024: Tissue Engineering and Regenerative Medicine
https://read.qxmd.com/read/38652179/involvement-of-the-glymphatic-meningeal-lymphatic-system-in-alzheimer-s-disease-insights-into-proteostasis-and-future-directions
#20
REVIEW
Kaoru Yamada, Takeshi Iwatsubo
BACKGROUND:  Alzheimer's disease (AD) is pathologically characterized by the abnormal accumulation of Aβ and tau proteins. There has long been a keen interest among researchers in understanding how Aβ and tau are ultimately cleared in the brain. The discovery of this glymphatic system introduced a novel perspective on protein clearance and it gained recognition as one of the major brain clearance pathways for clearing these pathogenic proteins in AD. This finding has sparked interest in exploring the potential contribution of the glymphatic/meningeal lymphatic system in AD...
April 23, 2024: Cellular and Molecular Life Sciences: CMLS
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