keyword
https://read.qxmd.com/read/38461302/dependency-on-host-vitamin-b12-has-shaped-mycobacterium-tuberculosis-complex-evolution
#21
JOURNAL ARTICLE
Elena Campos-Pardos, Santiago Uranga, Ana Picó, Ana Belén Gómez, Jesús Gonzalo-Asensio
Human and animal tuberculosis is caused by the Mycobacterium tuberculosis Complex (MTBC), which has evolved a genomic decay of cobalamin (vitamin B12) biosynthetic genes. Accordingly, and in sharp contrast to environmental, opportunistic and ancestor mycobacteria; we demonstrate that M. tuberculosis (Mtb), M. africanum, and animal-adapted lineages, lack endogenous production of cobalamin, yet they retain the capacity for exogenous uptake. A B12 anemic model in immunocompromised and immunocompetent mice, demonstrates improved survival, and lower bacteria in organs, in B12 anemic animals infected with Mtb relative to non-anemic controls...
March 9, 2024: Nature Communications
https://read.qxmd.com/read/38448159/systemic-metabolic-depletion-of-gut-microbiome-undermines-responsiveness-to-melanoma-immunotherapy
#22
JOURNAL ARTICLE
Natalia V Zakharevich, Maxim D Morozov, Vera A Kanaeva, Mikhail S Filippov, Tatyana I Zyubko, Artem B Ivanov, Vladimir I Ulyantsev, Ksenia M Klimina, Evgenii I Olekhnovich
Immunotherapy has proven to be a boon for patients battling metastatic melanoma, significantly improving their clinical condition and overall quality of life. A compelling link between the composition of the gut microbiome and the efficacy of immunotherapy has been established in both animal models and human patients. However, the precise biological mechanisms by which gut microbes influence treatment outcomes remain poorly understood. Using a robust dataset of 680 fecal metagenomes from melanoma patients, a detailed catalog of metagenome-assembled genomes (MAGs) was constructed to explore the compositional and functional properties of the gut microbiome...
May 2024: Life Science Alliance
https://read.qxmd.com/read/38446547/nonuremic-calciphylaxis-a-rare-and-unexpected-diagnosis-of-necrotic-ulcers
#23
JOURNAL ARTICLE
Beth B Richardson, Marc A Stees, Brandon R Gumbiner
Calciphylaxis is a rare and devastating condition found almost exclusively in patients with end-stage renal disease. Nonuremic calciphylaxis, an even more rare diagnosis, occurs in patients with preserved kidney function. We present a fatal case of nonuremic calciphylaxis with delayed and unexpected diagnosis despite early biopsy and testing. The patient presented with a 2-month history of painful ulceration to the left leg. Early biopsy was negative for calciphylaxis. Laboratory tests were negative for renal disease and autoimmune disorders...
2024: Journal of the American Podiatric Medical Association
https://read.qxmd.com/read/38444256/functional-analyses-of-bacterial-genomes-found-in-symbiodiniaceae-genome-assemblies
#24
JOURNAL ARTICLE
Eiichi Shoguchi, Masanobu Kawachi, Chuya Shinzato, Girish Beedessee
Bacterial-algal interactions strongly influence marine ecosystems. Bacterial communities in cultured dinoflagellates of the family Symbiodiniaceae have been characterized by metagenomics. However, little is known about whole-genome analysis of marine bacteria associated with these dinoflagellates. We performed in silico analysis of four bacterial genomes from cultures of four dinoflagellates of the genera Symbiodinium, Breviolum, Cladocopium and Durusdinium. Comparative analysis showed that the former three contain the alphaproteobacterial family Parvibaculaceae and that the Durusdinium culture includes the family Sphingomonadaceae...
April 2024: Environmental Microbiology Reports
https://read.qxmd.com/read/38436354/new-data-supporting-that-early-diagnosis-and-treatment-are-possible-and-necessary-in-intracellular-cobalamin-depletion-the-case-of-transcobalamin-ii-deficiency
#25
Bindi Verónica, Carolina Crespo, Noelia Lochner, Estefanía Rossetti, Cecilia Tagliavini, Carolina Bouso, Hernan Eiroa
OBJECTIVES: Transcobalamin II (TC) promotes the cellular uptake of cobalamin (Cbl) through receptor-mediated endocytosis of the TC-cbl complex in peripheral tissues. TC deficiency is a rare disorder that causes intracellular Cbl depletion. It presents in early infancy with a failure to thrive, diarrhea, anemia, agammaglobulinemia, and pancytopenia. Data from five TC-deficient patients including clinical, biochemical, and molecular findings, as well as long-term outcomes, were collected...
March 5, 2024: Journal of Pediatric Endocrinology & Metabolism: JPEM
https://read.qxmd.com/read/38426790/identification-and-characterization-of-the-tetr-family-transcriptional-regulator-nfft-in-rhizobium-johnstonii
#26
JOURNAL ARTICLE
Xiaofang Li, Zhangqun Li, Yajuan Wei, Zirui Chen, Shijie Xie
Symbiotic nitrogen fixation (SNF) by rhizobia is not only the main natural bionitrogen-source for organisms but also a green process leveraged to increase the fertility of soil for agricultural production. However, an insufficient understanding of the regulatory mechanism of SNF hinders its practical application. During SNF, nifA-fixA signaling is essential for the biosynthesis of nitrogenases and electron transfer chain proteins. In the present study, the TetR regulator NffT, whose mutation increased fixA expression, was discovered through a fixA -promoter-β-glucuronidase fusion assay performed with Rhizobium johnstonii ...
March 1, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38422016/gorse-ulex-europeaus-wastes-with-5-6-dimethyl-benzimidazole-supplementation-can-support-growth-of-vitamin-b12-producing-commensal-gut-microbes
#27
JOURNAL ARTICLE
Ajay Iyer, Eva C Soto Martín, Gary A Cameron, Petra Louis, Sylvia H Duncan, Charles S Bestwick, Wendy R Russell
Many commensal gut microbes are recognized for their potential to synthesize vitamin B12, offering a promising avenue to address deficiencies through probiotic supplementation. While bioinformatics tools aid in predicting B12 biosynthetic potential, empirical validation remains crucial to confirm production, identify cobalamin vitamers, and establish biosynthetic yields. This study investigates vitamin B12 production in three human colonic bacterial species: Anaerobutyricum hallii DSM 3353, Roseburia faecis DSM 16840, and Anaerostipes caccae DSM 14662, along with Propionibacterium freudenreichii DSM 4902 as a positive control...
2024: PloS One
https://read.qxmd.com/read/38419508/knuckle-hyperpigmentation-in-a-young-male-a-clinical-sign-of-b12-deficiency-not-to-be-missed
#28
JOURNAL ARTICLE
Harpreet Singh, Arvind Subramanian, Deba P Dibhar, Vikas Suri, Ashish Bhalla
Vitamin B12 and folate deficiency are reversible causes of megaloblastic anemia . Strict vegetarians are at risk of megaloblastic anemia due to low cobalamin in their diet . Knuckle hyperpigmentation in patients with megaloblastic anemia is due to excess melanin synthesis in skin. Here we present a case of a young vegetarian male with megaloblastic anemia with knuckle hyperpigmentation managed successfully with intravenous followed by oral vitamin b12 and folate supplementation.
February 29, 2024: Tropical Doctor
https://read.qxmd.com/read/38416546/the-rhodium-analogue-of-coenzyme-b12-as-an-anti-photoregulatory-ligand-inhibiting-bacterial-carh-photoreceptors
#29
JOURNAL ARTICLE
Ricardo Perez-Castano, Juan Aranda, Florian J Widner, Christoph Kieninger, Evelyne Deery, Martin J Warren, Modesto Orozco, Montserrat Elias-Arnanz, S Padmanabhan, Bernhard Kräutler
Coenzyme B12 (AdoCbl; 5´-deoxy-5'-adenosylcobalamin), the quintessential biological organometallic radical catalyst, has a formerly unanticipated, yet extensive, role in photoregulation in bacteria. The light-responsive cobalt-corrin AdoCbl performs this nonenzymatic role by facilitating the assembly of CarH photoreceptors into DNA-binding tetramers in the dark, suppressing gene expression. Conversely, exposure to light triggers the decomposition of this AdoCbl-bound complex by a still elusive photochemical mechanism, activating gene expression...
February 28, 2024: Angewandte Chemie
https://read.qxmd.com/read/38412777/exploring-the-potential-of-the-vitamin-b-12-derivative-azidocobalamin-to-undergo-huisgen-1-3-dipolar-azide-alkyne-cycloaddition-reactions
#30
JOURNAL ARTICLE
Ben J Stackpole, Jessica M Fredericksen, Nicola E Brasch
There is considerable interest in using the metalloprotein cofactor vitamin B12 as a vehicle to deliver drugs and diagnostic agents into mammalian or bacterial cells by exploiting the B12 -specific active uptake pathways. Conjugation of the cargo via the β-axial site or the 5'-OH of the ribose of the nucleotide are the most desirable sites, to maximise intracellular uptake. Herein we show the potential of conjugation at the beta-azido ligand of the vitamin B12 derivative azidocobalamin via a click-type azide-alkyne 1,3-dipolar cycloaddition (Huisgen cycloaddition) reaction...
February 10, 2024: Journal of Inorganic Biochemistry
https://read.qxmd.com/read/38408112/severe-hemolytic-anemia-atypical-presentation-of-cobalamin-deficiency
#31
JOURNAL ARTICLE
Carolina Fraga, Ana Losa, Inês Cascais, Cristina Garrido, Ana Lachado, Isabel Couto Guerra, Anabela Bandeira, Esmeralda Cleto, Emília Costa
Two severe cases of hemolytic anemia are described in different pediatric age groups, both linked to severe cobalamin deficiency from distinct causes. The first case refers to an exclusively breastfed infant with vitamin deficit secondary to maternal impaired absorption. Apart from the neurological deficits present at diagnosis, he also presented with infantile epileptic spasms syndrome a few months after treatment while having normal cobalamin serum levels. The second case refers to an adolescent with long-term inadequate intake...
April 1, 2024: Journal of Pediatric Hematology/oncology
https://read.qxmd.com/read/38404597/the-blue-light-dependent-lov-protein-ldap-of-dinoroseobacter-shibae-acts-as-antirepressor-of-the-ppsr-repressor-regulating-photosynthetic-gene-cluster-expression
#32
JOURNAL ARTICLE
Saskia Pucelik, Miriam Becker, Steffi Heyber, Lars Wöhlbrand, Ralf Rabus, Dieter Jahn, Elisabeth Härtig
In the marine α-proteobacterium Dinoroseobacter shibae more than 40 genes of the aerobic anoxygenic photosynthesis are regulated in a light-dependent manner. A genome-wide screen of 5,605 clones from a D. shibae transposon library for loss of pigmentation and changes in bacteriochlorophyll absorbance identified 179 mutant clones. The gene encoding the LOV-domain containing protein Dshi_1135 was identified by its colorless phenotype. The mutant phenotype was complemented by the expression of a Dshi_1135-strep fusion protein in trans...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38401303/vitamin-b12-inhibits-peptidylarginine-deiminases-and-ameliorates-rheumatoid-arthritis-in-caia-mice
#33
JOURNAL ARTICLE
Cheng-Wei Yang, Hsing-Yu Hsu, Yue-Zhi Lee, Shiow-Ju Lee
Rheumatoid arthritis is an autoimmune disease whose early onset correlates with dysregulated citrullination, a process catalyzed by peptidylarginine deiminase isoform 4 (PADI-4). Here, we report that PADI-4 is a novel target of vitamin B12, a water-soluble vitamin that serves as a cofactor in DNA synthesis and the metabolism of fatty and amino acids. Vitamin B12 preferentially inhibited PADI-4 over PADI-2 with comparable inhibitory activity to the reference compound Cl-amidine in enzymatic inhibition assays, and reduced total cellular citrullination levels including that of histone H3 citrullination mediated by PADI-4...
April 16, 2024: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/38398031/understanding-neuropathy-features-in-the-context-of-nitrous-oxide-abuse-a-combined-electrophysiological-and-metabolic-approach
#34
JOURNAL ARTICLE
Guillaume Grzych, Marie Scuccimarra, Laura Plasse, Emeline Gernez, Francois Cassim, Benjamin Touze, Marie Girot, Cécile Bossaert, Céline Tard
BACKGROUND: The incidence of neurological complications associated with nitrous oxide (N2 O) abuse, including N2 O-induced myelopathy and neuropathy, has risen in the past decade. N2 O-induced neuropathy often presents as a subacute axonal pathology; however, demyelinating patterns mimicking Guillain-Barré syndrome have also been observed. This study explores the metabolic pathophysiology of N2 O-induced neuropathy, focusing on the alteration in metabolism to provide a deeper understanding of the biochemical pathways influencing the diverse electrophysiological patterns observed...
February 14, 2024: Biomedicines
https://read.qxmd.com/read/38389799/vitamin-b12-analogues-from-gut-microbes-and-diet-differentially-impact-commensal-propionate-producers-of-the-human-gut
#35
JOURNAL ARTICLE
Palni Kundra, Anna Greppi, Monica Duppenthaler, Serafina Plüss, Benoit Pugin, Christophe Lacroix, Annelies Geirnaert
To produce the health-associated metabolite propionate, gut microbes require vitamin B12 as a cofactor to convert succinate to propionate. B12 is sourced in the human gut from the unabsorbed dietary fraction and in situ microbial production. However, experimental data for B12 production by gut microbes is scarce, especially on their produced B12-analogues. Further, the promotion of propionate production by microbially-produced and dietary B12 is not yet fully understood. Here, we demonstrated B12 production in 6 out of 8 in silico predicted B12-producing bacteria from the human gut...
2024: Frontiers in Nutrition
https://read.qxmd.com/read/38387306/the-mmachc-variant-c-158t-c-mild-clinical-and-biochemical-phenotypes-and-marked-hydroxocobalamin-response-in-cblc-patients
#36
JOURNAL ARTICLE
Tanguy Demaret, Karine Bédard, Jean-François Soucy, David Watkins, Pierre Allard, Alina Levtova, Alan O'Brien, Catherine Brunel-Guitton, David S Rosenblatt, Grant A Mitchell
Mutations in MMACHC cause cobalamin C disease (cblC, OMIM 277400), the commonest inborn error of vitamin B12 metabolism. In cblC, deficient activation of cobalamin results in methylcobalamin and adenosylcobalamin deficiency, elevating methylmalonic acid (MMA) and total plasma homocysteine (tHcy). We retrospectively reviewed the medical files of seven cblC patients: three compound heterozygotes for the MMACHC (NM_015506.3) missense variant c.158T>C p.(Leu53Pro) in trans with the common pathogenic mutation c...
February 10, 2024: Molecular Genetics and Metabolism
https://read.qxmd.com/read/38379927/a-cobalt-concentration-sensitive-btu-like-system-facilitates-cobalamin-uptake-in-anabaena-sp-pcc-7120
#37
JOURNAL ARTICLE
Julia Graf, Leonard Fresenborg, Hans-Michael Seitz, Rafael Pernil, Enrico Schleiff
Metal homeostasis is central to all forms of life, as metals are essential micronutrients with toxic effects at elevated levels. Macromolecular machines facilitate metal uptake into the cells and their intracellular level is regulated by multiple means, which can involve RNA elements and proteinaceous components. While the general principles and components for uptake and cellular content regulation of, e.g., cobalt have been identified for proteobacteria, the corresponding mechanism in other Gram-negative bacteria such as cyanobacteria remain to be established...
2024: Microbial Cell
https://read.qxmd.com/read/38377090/a-case-of-hemorrhagic-fever-with-renal-syndrome-and-abnormal-serum-levels-of-ferritin-vitamin-b12-and-folic-acid
#38
JOURNAL ARTICLE
Yiyun Ni, Bin Liu, Weizhen Zhang, Shengwen Shi, Jianchao Deng
INTRODUCTION: Hemorrhagic fever with renal syndrome (HFRS) is a globally prevalent infectious disease caused by the hantavirus in rodents. CASE STUDY: This report describes a case of a 36-year-old male presenting with elevated ferritin, vitamin B12, and folic acid deficiency during the early onset phase of HFRS. Despite normal renal function at admission, the patient exhibited persistent fever and thrombocytopenia, leading to a potential misdiagnosis of an atypical HFRS presentation...
January 31, 2024: Journal of Infection in Developing Countries
https://read.qxmd.com/read/38361451/association-between-dietary-macronutrient-composition-and-plasma-one-carbon-metabolites-and-b-vitamin-cofactors-in-patients-with-stable-angina-pectoris
#39
JOURNAL ARTICLE
Marianne Bråtveit, Anthea Van Parys, Thomas Olsen, Elin Strand, Ingvild Marienborg, Johnny Laupsa-Borge, Teresa Risan Haugsgjerd, Adrian McCann, Indu Dhar, Per Magne Ueland, Jutta Dierkes, Simon Nitter Dankel, Ottar Nygård, Vegard Lysne
Elevated plasma concentrations of several one-carbon metabolites are associated with increased CVD risk. Both diet-induced regulation and dietary content of one-carbon metabolites can influence circulating concentrations of these markers. We cross-sectionally analyzed 1928 patients with suspected stable angina pectoris (geometric mean age 61), representing elevated CVD risk, to assess associations between dietary macronutrient composition (food frequency questionnaire) and plasma one-carbon metabolites and related B-vitamin status markers (GC-MS/MS, LC-MS/MS, or microbiological assay)...
February 16, 2024: British Journal of Nutrition
https://read.qxmd.com/read/38354724/efficacy-and-tolerance-of-oral-versus-parenteral-cyanocobalamin-supplement-in-hypocobalaminaemic-dogs-with-chronic-enteropathy-a-controlled-randomised-open-label-trial
#40
JOURNAL ARTICLE
C Dor, S Nixon, S Salavati Schmitz, J Bazelle, P Černá, S Kilpatrick, N D Harvey, M Dunning
OBJECTIVES: Determine comparative tolerance of daily oral and weekly parenteral cobalamin supplementation, in hypocobalaminaemic dogs with chronic enteropathy. Determine whether oral is as effective as parenteral supplementation at achieving eucobalaminaemia, in hypocobalaminaemic dogs with protein-losing enteropathy, severe hypocobalaminaemia or high canine inflammatory bowel disease activity index at inclusion. MATERIALS AND METHODS: Thirty-seven client-owned dogs with hypocobalaminaemia and clinical signs of chronic enteropathy were prospectively enrolled in three UK referral centres...
February 14, 2024: Journal of Small Animal Practice
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