keyword
https://read.qxmd.com/read/38611215/improvements-in-hydrolytic-stability-of-alkali-activated-mine-tailings-via-addition-of-sodium-silicate-activator
#21
JOURNAL ARTICLE
Cara Clements, Lori Tunstall, Hector Gelber Bolanos Sosa, Ahmadreza Hedayat
Over 14 billion tons of mine tailings are produced throughout the world each year, and this type of waste is generally stored onsite indefinitely. Alkali activation is a promising strategy for the reuse of mine tailings to produce construction materials, converting this waste stream into a value-added product. One major problem with alkali-activated mine tailings is their low durability in water (i.e., low hydrolytic stability). In this article, the influence of a mixed sodium hydroxide/sodium silicate alkali activator on the compressive strength, hydrolytic stability, and microstructure of alkali-activated materials (AAMs) were systematically investigated...
March 31, 2024: Polymers
https://read.qxmd.com/read/38609156/cytosolic-rna-binding-of-the-mitochondrial-tca-cycle-enzyme-malate-dehydrogenase-mdh2
#22
JOURNAL ARTICLE
Michelle Noble, Aindrila Chatterjee, Thileepan Sekaran, Thomas Schwarzl, Matthias W Hentze
Several enzymes of intermediary metabolism have been identified to bind RNA in 2 cells, with potential consequences for the bound RNAs and/or the enzyme. In this 3 study, we investigate the RNA-binding activity of the mitochondrial enzyme malate 4 dehydrogenase 2 (MDH2), which functions in the tricarboxylic acid (TCA) cycle and 5 the malate-aspartate shuttle. We confirmed in cellulo RNA-binding of MDH2 using 6 orthogonal biochemical assays and performed enhanced crosslinking and 7 immunoprecipitation (eCLIP) to identify the cellular RNAs associated with endogenous 8 MDH2...
April 12, 2024: RNA
https://read.qxmd.com/read/38608845/the-discovery-of-an-anti-candida-xanthone-with-selective-inhibition-of-candida-albicans-gapdh
#23
JOURNAL ARTICLE
Xing-Ru Chen, Tao Zhou, Zhuo-Da Zhou, Zhan-Hong Fang, Kai-Bo Wang, Chao Zhang, Ling-Yi Kong, Ming-Hua Yang
OBJECTIVES: This study aimed to discover novel antifungals targeting Candida albicans glyceraldehyde-3-phosphate dehydrogenase (CaGAPDH), have an insight into inhibitory mode, and provide evidence supporting CaGAPDH as a target for new antifungals. METHODS: Virtual screening was utilized to discover inhibitors of CaGAPDH. The inhibitory effect on cellular GAPDH was evaluated by determining the levels of ATP, NAD, NADH, etc., as well as examining GAPDH mRNA and protein expression...
April 10, 2024: International Journal of Antimicrobial Agents
https://read.qxmd.com/read/38607952/product-distribution-of-steady-state-and-pulsed-electrochemical-regeneration-of-1-4-nadh-and-integration-with-enzymatic-reaction
#24
JOURNAL ARTICLE
Mohammed Ali Saif Al-Shaibani, Thaleia Sakoleva, Luka A Živković, Harry P Austin, Mark Dörr, Liane Hilfert, Edgar Haak, Uwe T Bornscheuer, Tanja Vidaković-Koch
The direct electrochemical reduction of nicotinamide adenine dinucleotide (NAD+ ) results in various products, complicating the regeneration of the crucial 1,4-NADH cofactor for enzymatic reactions. Previous research primarily focused on steady-state polarization to examine potential impacts on product selectivity. However, this study explores the influence of dynamic conditions on the selectivity of NAD+ reduction products by comparing two dynamic profiles with steady-state conditions. Our findings reveal that the main products, including 1,4-NADH, several dimers, and ADP-ribose, remained consistent across all conditions...
April 12, 2024: ChemistryOpen
https://read.qxmd.com/read/38607920/hif1%C3%AE-dependent-uncoupling-of-glycolysis-suppresses-tumor-cell-proliferation
#25
JOURNAL ARTICLE
Andrés A Urrutia, Claudia Mesa-Ciller, Andrea Guajardo-Grence, H Furkan Alkan, Inés Soro-Arnáiz, Anke Vandekeere, Ana Margarida Ferreira Campos, Sebastian Igelmann, Lucía Fernández-Arroyo, Gianmarco Rinaldi, Doriane Lorendeau, Katrien De Bock, Sarah-Maria Fendt, Julián Aragonés
Hypoxia-inducible factor-1α (HIF1α) attenuates mitochondrial activity while promoting glycolysis. However, lower glycolysis is compromised in human clear cell renal cell carcinomas, in which HIF1α acts as a tumor suppressor by inhibiting cell-autonomous proliferation. Here, we find that, unexpectedly, HIF1α suppresses lower glycolysis after the glyceraldehyde 3-phosphate dehydrogenase (GAPDH) step, leading to reduced lactate secretion in different tumor cell types when cells encounter a limited pyruvate supply such as that typically found in the tumor microenvironment in vivo...
April 11, 2024: Cell Reports
https://read.qxmd.com/read/38605962/new-insight-into-arginine-and-tryptophan-metabolism-in-macrophage-activation-during-tuberculosis
#26
REVIEW
Kangling Zhang, Abhishek Mishra, Chinnaswamy Jagannath
Arginine and tryptophan are pivotal in orchestrating cytokine-driven macrophage polarization and immune activation. Specifically, interferon-gamma (IFN-γ) stimulates inducible nitric oxide synthase (iNOS) expression), leading to the conversion of arginine into citrulline and nitric oxide (NO), while Interleukin-4 (IL4) promotes arginase activation, shifting arginine metabolism toward ornithine. Concomitantly, IFN-γ triggers indoleamine 2,3-dioxygenase 1 (IDO1) and Interleukin-4 induced 1 (IL4i1), resulting in the conversion of tryptophan into kynurenine and indole-3-pyruvic acid...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38604394/biochemical-structural-and-computational-analyses-of-two-new-clinically-identified-missense-mutations-of-aldh7a1
#27
JOURNAL ARTICLE
David A Korasick, David P Buckley, Alessandra Palpacelli, Ida Cursio, Elisabetta Cesaroni, Jianlin Cheng, John J Tanner
Aldehyde dehydrogenase 7A1 (ALDH7A1) catalyzes a step of lysine catabolism. Certain missense mutations in the ALDH7A1 gene cause pyridoxine dependent epilepsy (PDE), a rare autosomal neurometabolic disorder with recessive inheritance that affects almost 1:65000 live births and is classically characterized by recurrent seizures from the neonatal period. We report a biochemical, structural, and computational study of two novel ALDH7A1 missense mutations that were identified in a child with rare recurrent seizures from the third month of life...
April 9, 2024: Chemico-biological Interactions
https://read.qxmd.com/read/38600943/advancements-in-cho-metabolomics-techniques-current-state-and-evolving-methodologies
#28
REVIEW
Rita Singh, Eram Fatima, Lovnish Thakur, Sevaram Singh, Chandra Ratan, Niraj Kumar
Background: Investigating the metabolic behaviour of different cellular phenotypes, i.e., good/bad grower and/or producer, in production culture is important to identify the key metabolite(s)/pathway(s) that regulate cell growth and/or recombinant protein production to improve the overall yield. Currently, LC-MS, GC-MS and NMR are the most used and advanced technologies for investigating the metabolome. Although contributed significantly in the domain, each technique has its own biasness towards specific metabolites or class of metabolites due to various reasons including variability in the concept of working, sample preparation, metabolite-extraction methods, metabolite identification tools, and databases...
2024: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/38600706/multifunctional-biomolecules-bridging-a-buried-interface-for-efficient-perovskite-solar-cells
#29
JOURNAL ARTICLE
Yifei Wang, Yan Li, Fei Deng, Xiangfei Song, Wanqi Zhang, Xia Tao
The inevitably positively and negatively charged defects on the SnO2 /perovskite buried interface often lead to nonradiative recombination of carriers and unfavorable alignment of energy levels in perovskite solar cells (PSCs). Interface engineering is a reliable strategy to manage charged defects. Herein, the nicotinamide adenine dinucleotide (NAD) molecules with multiple active groups of ─P=O, ─P-O, and ─NH2 are introduced to bridge the SnO2 /perovskite buried interface for achieving simultaneous elimination of positively and negatively charged defects...
April 10, 2024: ACS Applied Materials & Interfaces
https://read.qxmd.com/read/38599881/nad-p-h-quinone-oxidoreductase-1-induces-complicated-effects-on-mitochondrial-dysfunction-and-ferroptosis-in-an-expression-level-dependent-manner
#30
JOURNAL ARTICLE
Jaewang Lee, Dong-Hoon Hyun
NAD(P)H-quinone oxidoreductase 1 (NQO1) is an essential redox enzyme responsible for redox balance and energy metabolism. Despite of its importance, the brain contains high capacity of polyunsaturated fatty acids and maintains low levels of NQO1 expression. In this study, we examined how levels of NQO1 expression affects cell survival in response to toxic insults causing mitochondrial dysfunction and ferroptosis, and whether NQO1 has a potential as a biomarker in different stressed conditions. Following treatment with rotenone, overexpressed NQO1 in SH-SY5Y cells improved cell survival by reducing mitochondrial reductive stress via increased NAD+ supply without mitochondrial biogenesis...
April 10, 2024: Bioscience Trends
https://read.qxmd.com/read/38599114/a-dual-recognition-based-strategy-employing-ni-modified-metal-organic-framework-for-in-situ-screening-of-sirt1-inhibitors-from-chinese-herbs
#31
JOURNAL ARTICLE
Xinlin Chen, Lihong Hong, Ying Wu, Yucheng Gu, Jianguang Luo, Lingyi Kong
Sirtuin1 (SIRT1), an NAD+ -dependent histone deacetylase, plays a crucial role in regulating molecular signaling pathways. Recently, inhibition of SIRT1 rather than its activation shows the therapeutic potential for central nervous system disorder, however, the discovered SIRT1 inhibitors remains limited. In this work, a dual recognition-based strategy was developed to screen SIRT1 inhibitors from natural resources in situ. This approach utilized a Ni-modified metal-organic framework (Ni@Tyr@UiO-66-NH2 ) along with cell lysate containing an engineered His-tagged SIRT1 protein, eliminating the need for purified proteins, pure compounds, and protein immobilization...
March 27, 2024: Talanta
https://read.qxmd.com/read/38599036/design-and-preparation-of-nmn-nanoparticles-based-on-protein-marine-polysaccharide-with-increased-nad-level-in-d-galactose-induced-aging-mice-model
#32
JOURNAL ARTICLE
Shan Sun, Lijuan Zhang, Yu Li, Wentao Su, A M Abd El-Aty, Mingqian Tan
Nicotinamide mononucleotide (NMN) is being investigated for its ability to address the decline in NAD+ level during aging. This study aimed to construct a delivery system based on ovalbumin and fucoidan nanoparticles to ameliorate the bioaccessibility of NMN by increasing NAD+ level in aging mouse model. The NMN-loaded ovalbumin and fucoidan nanoparticles (OFNPs) were about 177 nm formed by the interplay of hydrogen bonds between ovalbumin and fucoidan. Compared with free NMN, NMN-loaded OFNPs intervention could obviously improve the antioxidant enzyme activity of senescent cell induced by D-galactose...
April 6, 2024: Colloids and Surfaces. B, Biointerfaces
https://read.qxmd.com/read/38599017/specificity-and-dynamics-of-h-2-o-2-detoxification-by-the-cytosolic-redox-regulatory-network-as-revealed-by-in-vitro-reconstitution
#33
JOURNAL ARTICLE
Lara Vogelsang, Jürgen Eirich, Iris Finkemeier, Karl-Josef Dietz
The thiol redox state is a decisive functional characteristic of proteins in cell biology. Plasmatic cell compartments maintain a thiol-based redox regulatory network linked to the glutathione/glutathione disulfide couple (GSH/GSSG) and the NAD(P)H system. The basic network constituents are known and in vivo cell imaging with gene-encoded probes have revealed insight into the dynamics of the [GSH]2 /[GSSG] redox potential, cellular H2 O2 and NAD(P)H+H+ amounts in dependence on metabolic and environmental cues...
April 3, 2024: Redox Biology
https://read.qxmd.com/read/38594590/visualizing-subcellular-changes-in-the-nad-h-pool-size-versus-redox-state-using-fluorescence-lifetime-imaging-microscopy-of-nadh
#34
JOURNAL ARTICLE
Angela Song, Nicole Zhao, Diana C Hilpert, Caroline Perry, Joseph A Baur, Douglas C Wallace, Patrick M Schaefer
NADH autofluorescence imaging is a promising approach for visualizing energy metabolism at the single-cell level. However, it is sensitive to the redox ratio and the total NAD(H) amount, which can change independently from each other, for example with aging. Here, we evaluate the potential of fluorescence lifetime imaging microscopy (FLIM) of NADH to differentiate between these modalities.We perform targeted modifications of the NAD(H) pool size and ratio in cells and mice and assess the impact on NADH FLIM...
April 9, 2024: Communications Biology
https://read.qxmd.com/read/38594438/glycolysis-is-reduced-in-dengue-virus-2-infected-liver-cells
#35
JOURNAL ARTICLE
Chanida Chumchanchira, Suwipa Ramphan, Wannapa Sornjai, Sittiruk Roytrakul, Pathrapol Lithanatudom, Duncan R Smith
Infections with dengue virus (DENV) remain a worldwide public health problem. A number of bona fide cellular targets of DENV have been identified including liver cells. Despite the many lines of evidence confirming the involvement of hepatocytes during DENV infection, only a few studies have used proteomic analysis to understand the modulation of the cellular proteome occurring upon DENV infection. We utilized a 2D-gel electrophoresis analysis to identify proteins that were differentially regulated by DENV 2 infection of liver (Hep3B) cells at 12 h post infection (hpi) and at 48 hpi...
April 9, 2024: Scientific Reports
https://read.qxmd.com/read/38593645/a-near-infrared-fluorescent-probe-with-two-photon-excitation-for-in-situ-imaging-of-nqo1-in-human-colorectum-cancer-tissue
#36
JOURNAL ARTICLE
Wei Jiang, Weizhen An, Zhongxi Huang, Chenfeng Xu, Qian Shen, Chibin Pu, Shiji Zhang, Qiong Wu, Lin Li, Changmin Yu
Colorectum cancer has become one of the most fatal cancer diseases, in which NAD(P)H: quinone oxidoreductase 1 (NQO1) plays a role in intracellular free radical reduction and detoxification and has been linked to colorectum cancer and chemotherapy resistance. Therefore, rational design of optical probe for NQO1 detection is urgent for the early diagnosis of colorectum cancer. Herein, we have developed a novel two-photon fluorescent probe, WHFD, which is capable of selectively detecting of intracellular NQO1 with two-photon (TP) absorption (800 nm) and near-infrared emission (620 nm)...
April 7, 2024: Talanta
https://read.qxmd.com/read/38592457/tryptophan-catabolism-via-the%C3%A2-kynurenine-pathway-regulates-infection-and-inflammation-from-mechanisms-to-biomarkers-and-therapies
#37
REVIEW
Jingpu Zhang, Yanlei Liu, Xiao Zhi, Li Xu, Jie Tao, Daxiang Cui, Tie Fu Liu
BACKGROUND: L-Tryptophan (L-Trp), an essential amino acid, is the only amino acid whose level is regulated specifically by immune signals. Most proportions of Trp are catabolized via the kynurenine (Kyn) pathway (KP) which has evolved to align the food availability and environmental stimulation with the host pathophysiology and behavior. Especially, the KP plays an indispensable role in balancing the immune activation and tolerance in response to pathogens. SCOPE OF REVIEW: In this review, we elucidate the underlying immunological regulatory network of Trp and its KP-dependent catabolites in the pathophysiological conditions by participating in multiple signaling pathways...
April 9, 2024: Inflammation Research: Official Journal of the European Histamine Research Society ... [et Al.]
https://read.qxmd.com/read/38591871/redox-regulation-by-priming-agents-towards-a-sustainable-agriculture
#38
JOURNAL ARTICLE
Durgesh Kumar Tripathi, Javaid Akhtar Bhat, Chrystalla Antoniou, Nidhi Kandhol, Vijay Pratap Singh, Alisdair R Fernie, Vasileios Fotopoulos
Plant are sessile organisms that are often subjected to a multitude of environmental stresses, with the occurrence of these events being further intensified by global climate change. Crop species therefore require specific adaptations to tolerate climatic variability for sustainable food production. Plant stress results in excess accumulation of reactive oxygen species (ROS) leading to oxidative stress, and loss of cellular redox balance in the plant cells. Moreover, enhancement of cellular oxidation as well as oxidative signals have recently been recognized as crucial players in plant growth regulation under stress conditions...
March 29, 2024: Plant & Cell Physiology
https://read.qxmd.com/read/38590607/crispr-holmes-based-nad-detection
#39
JOURNAL ARTICLE
Songkuan Zhuang, Tianshuai Hu, Hongzhong Zhou, Shiping He, Jie Li, Yuehui Zhang, Dayong Gu, Yong Xu, Yijian Chen, Jin Wang
Studies have indicated that the intracellular nicotinamide adenine dinucleotide (NAD+ ) level is associated with the occurrence and development of many diseases. However, traditional nicotinamide adenine dinucleotide (NAD+ ) detection techniques are time-consuming and may require large and expensive instruments. We recently found that the clustered regularly interspaced short palindromic repeat (CRISPR)-Cas12a protein can be inactivated by AcrVA5-mediated acetylation and reactivated by CobB, using NAD+ as the co-factor...
2024: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/38590496/the-effect-of-short-term-nad3%C3%A2-supplementation-on-circulating-adult-stem-cells-in-healthy-individuals-aged-40-70-years
#40
JOURNAL ARTICLE
Janine Hellenbrand, Richard J Bloomer, Marie Van der Merwe
Objective This study aimed to assess the impact of acute and short-term supplementation with NAD3® , a theacrine-containing supplement, on circulating adult stem cell numbers in a healthy male and female population aged 40-70 years. Methods This was a double-blind, placebo-controlled crossover study with 12 participants randomized to receive either NAD3® or a placebo for seven days. Blood samples were collected after an overnight fast, before and after the seven-day supplementation period, and one and two hours after the final supplement dose...
March 2024: Curēus
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