keyword
https://read.qxmd.com/read/38647296/snow-viruses-and-their-implications-on-red-snow-algal-blooms
#1
JOURNAL ARTICLE
Adam R Barno, Kevin Green, Forest Rohwer, Cynthia B Silveira
Algal blooms can give snowmelt a red color, reducing snow albedo and creating a runaway effect that accelerates snow melting. The occurrence of red snow is predicted to grow in polar and subpolar regions with increasing global temperatures. We hypothesize that these algal blooms affect virus-bacteria interactions in snow, with potential effects on snowmelt dynamics. A genomic analysis of double-stranded DNA virus communities in red and white snow from the Whistler region of British Columbia, Canada, identified 792 putative viruses infecting bacteria...
April 22, 2024: MSystems
https://read.qxmd.com/read/38646657/nad-precursors-promote-the-restoration-of-spermatogenesis-in-busulfan-treated-mice-through-inhibiting-sirt2-regulated-ferroptosis
#2
JOURNAL ARTICLE
Yan-Qin Feng, Xuan Liu, Ning Zuo, Mu-Bin Yu, Wen-Meng Bian, Bao-Quan Han, Zhong-Yi Sun, Massimo De Felici, Wei Shen, Lan Li
Rationale: In recent years, nicotinamide adenine dinucleotide (NAD+ ) precursors (Npre) have been widely employed to ameliorate female reproductive problems in both humans and animal models. However, whether and how Npre plays a role in the male reproductive disorder has not been fully clarified. Methods: In the present study, a busulfan-induced non-obstructive azoospermic mouse model was used, and Npre was administered for five weeks following the drug injection, with the objective of reinstating spermatogenesis and fertility...
2024: Theranostics
https://read.qxmd.com/read/38645486/analysis-of-sirt1-genetic-variants-in-young-mexican-individuals-relationships-with-overweight-and-obesity
#3
JOURNAL ARTICLE
S Salazar-García, A Ibáñez-Salazar, E Lares-Villaseñor, Noemi Gaytan Pacheco, E Uresti-Rivera, D P Portales-Pérez, U De la Cruz-Mosso, J M Vargas-Morales
The high prevalence of obesity in Mexico starting from the early stages of life is concerning and represents a major public health problem. Genetic association studies have reported that single nucleotide variants (SNVs) in SIRT1 , an NAD+- dependent deacetylase that plays an important role in the regulation of metabolic cellular functions, are associated with multiple metabolic disorders and the risk of obesity. In the present study, we analyzed the effect that the SNVs rs1467568 and rs7895833 of the SIRT1 gene may have on cardiometabolic risk factors in a young adult population from Mexico...
2024: Frontiers in Genetics
https://read.qxmd.com/read/38645233/optimization-of-1-h-mr-spectroscopy-methods-for-large-volume-acquisition-of-low-concentration-downfield-resonances-at-3t-and-7t
#4
Neil E Wilson, Mark A Elliott, Ravi Prakash Reddy Nanga, Sophia Swago, Walter R Witschey, Ravinder Reddy
PURPOSE: This goal of this study was to optimize spectrally selective 1 H MRS methods for large volume acquisition of low concentration metabolites with downfield resonances at 7T and 3T, with particular attention paid to detection of nicotinamide adenine dinucleotide (NAD + ) and tryptophan. METHODS: Spectrally selective excitation was used to avoid magnetization transfer effects with water, and various sinc pulses were compared to a pure-phase E-BURP pulse. Localization using a single slice selective pulse was compared to voxel-based localization that used three orthogonal refocusing pulses, and low bandwidth refocusing pulses were used to take advantage of the chemical shift displacement of water...
April 12, 2024: medRxiv
https://read.qxmd.com/read/38645109/metabolite-accumulation-from-oral-nmn-supplementation-drives-aging-specific-kidney-inflammation
#5
Tara A Saleh, Jeremy Whitson, Phoebe Keiser, Praveena Prasad, Brenita C Jenkins, Tori Sodeinde, Carolyn N Mann, Peter S Rabinovitch, Melanie R McReynolds, Mariya T Sweetwyne
UNLABELLED: The mitochondrial-rich renal tubule cells are key regulators of blood homeostasis via excretion and reabsorption of metabolic waste. With age, tubules are subject to increasing mitochondrial dysfunction and declining nicotinamide adenine dinucleotide (NAD + ) levels, both hampering ATP production efficiency. We tested two mitochondrial interventions in young (6-mo) and aged (26-mo) adult male mice: elamipretide (ELAM), a tetrapeptide in clinical trials that improves mitochondrial structure and function, and nicotinamide mononucleotide (NMN), an NAD + intermediate and commercially available oral supplement...
April 13, 2024: bioRxiv
https://read.qxmd.com/read/38644705/vitamin-d-and-mitochondrial-activity-preservation-in-covid-19
#6
EDITORIAL
Julien Giacomoni, Jean-Marc Sabatier
No abstract text is available yet for this article.
April 19, 2024: Infectious Disorders Drug Targets
https://read.qxmd.com/read/38644586/the-critical-role-of-residues-phe120-and-val161-of-2%C3%A2-r-3%C3%A2-r-%C3%A2-2-3%C3%A2-butanediol-dehydrogenase-from-neisseria-gonorrhoeae-as-probed-by-molecular-docking-and-site-directed-mutagenesis
#7
JOURNAL ARTICLE
Xue Dong, Tingting Zhang, Chuanyue Gui, Shuping Fei, Haonan Xu, Jianrong Chang, Chaoqun Lian, Wanggang Tang
NAD+ -dependent (2 R,3 R)‑2,3‑butanediol dehydrogenase (BDH) from Neisseria gonorrhoeae (NgBDH) is a representative member of the medium-chain dehydrogenase/reductase (MDR) superfamily. To date, little information is available on the substrate binding sites and catalytic residues of BDHs from this superfamily. In this work, according to molecular docking studies, we found that conserved residues Phe120 and Val161 form strong hydrophobic interactions with both (2 R,3 R)‑2,3‑butanediol (RR-BD) and meso-2,3‑butanediol (meso-BD) and that mutations of these residues to alanine or threonine impair substrate binding...
April 21, 2024: Journal of Basic Microbiology
https://read.qxmd.com/read/38642938/dysregulation-of-cd4-and-cd8-resident-memory-t-myeloid-and-stromal-cells-in-steroid-experienced-checkpoint-inhibitor-colitis
#8
JOURNAL ARTICLE
Jun Yan He, Yang-Joon Kim, Elvira Mennillo, Iulia Rusu, Jared Bain, Arjun A Rao, Christopher Andersen, Karen Law, Hai Yang, Jessica Tsui, Alan Shen, Brittany Davidson, Divyashree Kushnoor, Yimin Shi, Frances Fan, Alexander Cheung, Li Zhang, Lawrence Fong, Alexis J Combes, Angela O Pisco, Michael G Kattah, David Y Oh
BACKGROUND: Colitis caused by checkpoint inhibitors (CPI) is frequent and is treated with empiric steroids, but CPI colitis mechanisms in steroid-experienced or refractory disease are unclear. METHODS: Using colon biopsies and blood from predominantly steroid-experienced CPI colitis patients, we performed multiplexed single-cell transcriptomics and proteomics to nominate contributing populations. RESULTS: CPI colitis biopsies showed enrichment of CD4+ resident memory (RM) T cells in addition to CD8+ RM and cytotoxic CD8+ T cells...
April 19, 2024: Journal for Immunotherapy of Cancer
https://read.qxmd.com/read/38642915/trilobatin-regulates-glucose-metabolism-by-ameliorating-oxidative-stress-and-insulin-resistance-in-vivo-and-in-vitro
#9
JOURNAL ARTICLE
Ming He, Yuqing Zhang, Yuhan Zhai, Yaping Li, Guorui Yang, Shaoxuan Yu, Haifang Xiao, Yuanda Song
OBJECTIVES: Trilobatin, a glycosylated dihydrochalcone, has been reported to have anti-diabetic properties. However, the underlying mechanism remains unexplained. METHODS: In this investigation, the regulation of trilobatin on glucose metabolism of insulin resistance (IR)-HepG2 cells and streptozocin (STZ)-induced mice and its mechanism were evaluated. KEY FINDINGS: Different doses of trilobatin (5, 10 and 20 μM) increased glucose consumption, glycogen content, hexokinase (HK), and pyruvate kinase (PK) activity in IR-HepG2 cells...
April 20, 2024: Journal of Pharmacy and Pharmacology
https://read.qxmd.com/read/38641561/controlled-biocatalytic-synthesis-of-a-metal-nanoparticle-enzyme-hybrid-demonstration-for-catalytic-h2-driven-nadh-recycling
#10
JOURNAL ARTICLE
Lucy B F Browne, Tim Sudmeier, Maya A Landis, Christopher S Allen, Kylie Alison Vincent
Here we demonstrate the preparation of enzyme-metal biohybrids of NAD+ reductase with biocatalytically-synthesised small gold nanoparticles (NPs, <10 nm) and core-shell gold-platinum NPs for tandem catalysis. Despite the variety of methods available for NP synthesis, there remains a need for more sustainable strategies which also give precise control over the shape and size of the metal NPs for applications in catalysis, biomedical devices, and electronics. We demonstrate facile biosynthesis of spherical, highly uniform, gold NPs under mild conditions using an isolated enzyme moiety, an NAD+ reductase, to reduce metal salts while oxidising a nicotinamide-containing cofactor...
April 19, 2024: Angewandte Chemie
https://read.qxmd.com/read/38641024/an-allosteric-inhibitor-of-sirtuin-2-blocks-hepatitis-b-virus-covalently-closed-circular-dna-establishment-and-its-transcriptional-activity
#11
JOURNAL ARTICLE
Liudi Tang, Stacy Remiszewski, Andrew Snedeker, Lillian W Chiang, Thomas Shenk
296 million people worldwide are predisposed to developing severe end-stage liver diseases due to chronic hepatitis B virus (HBV) infection. HBV forms covalently closed circular DNA (cccDNA) molecules that persist as episomal DNA in the nucleus of infected hepatocytes and drive viral replication. Occasionally, the HBV genome becomes integrated into host chromosomal DNA, a process that is believed to significantly contribute to circulating HBsAg levels and HCC development. Neither cccDNA accumulation nor expression from integrated HBV DNA are directly targeted by current antiviral treatments...
April 17, 2024: Antiviral Research
https://read.qxmd.com/read/38640109/a-magnesium-binding-site-and-the-anomeric-effect-regulate-the-abiotic-redox-chemistry-of-nicotinamide-nucleotides
#12
JOURNAL ARTICLE
Lorenzo Sebastianelli, Harpreet Kaur, Ziniu Chen, Ramanarayanan Krishnamurthy, Sheref S Mansy
Nicotinamide adenine dinucleotide (NAD+) is a redox active molecule that is universally found in biology. Despite the importance and simplicity of this molecule, few reports exist that investigate which molecular features are important for the activity of this ribodinucleotide. By exploiting the nonenzymatic reduction and oxidation of NAD+ by pyruvate and methylene blue, respectively, we were able to identify key molecular features necessary for the intrinsic activity of NAD+ through kinetic analysis. Such features may explain how NAD+ could have been selected early during the emergence of life...
April 19, 2024: Chemistry: a European Journal
https://read.qxmd.com/read/38640072/x-ray-structure-and-enzymatic-study-of-a-bacterial-nadph-oxidase-highlight-the-activation-mechanism-of-eukaryotic-nox
#13
JOURNAL ARTICLE
Isabelle Petit-Hartlein, Annelise Vermot, Michel Thepaut, Anne-Sophie Humm, Florine Dupeux, Jerome Dupuy, Vincent Chaptal, Jose Antonio Marquez, Susan M E Smith, Franck Fieschi
NADPH oxidases (NOX) are transmembrane proteins, widely spread in eukaryotes and prokaryotes, that produce reactive oxygen species (ROS). Eukaryotes use the ROS products for innate immune defense and signaling in critical (patho)physiological processes. Despite the recent structures of human NOX isoforms, the activation of electron transfer remains incompletely understood. SpNOX, a homolog from Streptococcus pneumoniae , can serves as a robust model for exploring electron transfers in the NOX family thanks to its constitutive activity...
April 19, 2024: ELife
https://read.qxmd.com/read/38638903/the-dmsabc-s-oxide-reductase-is-an-essential-component-of-a-novel-hypochlorite-inducible-system-of-extracellular-stress-defense-in-haemophilus-influenzae
#14
JOURNAL ARTICLE
Marufa Nasreen, Daniel Ellis, Jennifer Hosmer, Ama-Tawiah Essilfie, Emmanuelle Fantino, Peter Sly, Alastair G McEwan, Ulrike Kappler
Defenses against oxidative damage to cell components are essential for survival of bacterial pathogens during infection, and here we have uncovered that the DmsABC S-/N-oxide reductase is essential for virulence and in-host survival of the human-adapted pathogen, Haemophilus influenzae . In several different infection models, H. influenzae Δ dmsA strains showed reduced immunogenicity as well as lower levels of survival in contact with host cells. Expression of DmsABC was induced in the presence of hypochlorite and paraquat, closely linking this enzyme to defense against host-produced antimicrobials...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38638804/individual-differences-in-auditory-perception-predict-learning-of-non-adjacent-tone-sequences-in-3-year-olds
#15
JOURNAL ARTICLE
Jutta L Mueller, Ivonne Weyers, Angela D Friederici, Claudia Männel
Auditory processing of speech and non-speech stimuli oftentimes involves the analysis and acquisition of non-adjacent sound patterns. Previous studies using speech material have demonstrated (i) children's early emerging ability to extract non-adjacent dependencies (NADs) and (ii) a relation between basic auditory perception and this ability. Yet, it is currently unclear whether children show similar sensitivities and similar perceptual influences for NADs in the non-linguistic domain. We conducted an event-related potential study with 3-year-old children using a sine-tone-based oddball task, which simultaneously tested for NAD learning and auditory perception by means of varying sound intensity...
2024: Frontiers in Human Neuroscience
https://read.qxmd.com/read/38638235/non-invasive-diagnosis-of-bacterial-and-non-bacterial-inflammations-using-a-dual-enzyme-responsive-fluorescent-indicator
#16
JOURNAL ARTICLE
Yue He, Majun Yang, Jingyi Cui, Can Zhao, Bin Jiang, Jiayun Guan, Xiaobo Zhou, Miao He, Yaya Zhen, Yuxue Zhang, Rongrong Jing, Qi Wang, Yuling Qin, Li Wu
Bacterial infections, as the second leading cause of global death, are commonly treated with antibiotics. However, the improper use of antibiotics contributes to the development of bacterial resistance. Therefore, the accurate differentiation between bacterial and non-bacterial inflammations is of utmost importance in the judicious administration of clinical antibiotics and the prevention of bacterial resistance. However, as of now, no fluorescent probes have yet been designed for the relevant assessments. To this end, the present study reports the development of a novel fluorescence probe (CyQ) that exhibits dual-enzyme responsiveness...
April 17, 2024: Chemical Science
https://read.qxmd.com/read/38638042/impact-of-nf-%C3%AE%C2%BAb-signaling-and-sirtuin-1-protein-for-targeted-inflammatory-intervention
#17
JOURNAL ARTICLE
Sagar Das, Tuhin Mukherjee, Satyajit Mohanty, Nikita Nayak, Payel Mal, Sumel Ashique, Radheshyam Pal, Sourav Mohanto, Himanshu Sharma
This detailed review disclosed the NF-κB pro-inflammatory gen's activity regulation and explored the therapeutic significance, activation, and inhibition. This study uncovers the structural intricacies of the NF-κB proteins and highlights the key role of SIRT1 in NF-kB signaling pathway regulation. Particularly the Rel Homology Domain (RHD), elucidating interactions and the regulatory mechanisms involving inhibitory proteins like IκB and p100 within the NF-κB signaling cascade. Disruption of the pathway is important in uncontrolled inflammation and immune disorders...
April 17, 2024: Current Pharmaceutical Biotechnology
https://read.qxmd.com/read/38637859/cellular-atp-redistribution-achieved-by-deleting-tgparp-improves-lignocellulose-utilization-of-trichoderma-under-heat-stress
#18
JOURNAL ARTICLE
Tuo Li, Yang Liu, Han Zhu, Linhua Cao, Yihao Zhou, Dongyang Liu, Qirong Shen
BACKGROUND: Thermotolerance is widely acknowledged as a pivotal factor for fungal survival across diverse habitats. Heat stress induces a cascade of disruptions in various life processes, especially in the acquisition of carbon sources, while the mechanisms by which filamentous fungi adapt to heat stress and maintain carbon sources are still not fully understood. RESULTS: Using Trichoderma guizhouense, a representative beneficial microorganism for plants, we discover that heat stress severely inhibits the lignocellulases secretion, affecting carbon source utilization efficiency...
April 18, 2024: Biotechnol Biofuels Bioprod
https://read.qxmd.com/read/38637306/nicotinic-acid-availability-impacts-redox-cofactor-metabolism-in-saccharomyces-cerevisiae-during-alcoholic-fermentation
#19
JOURNAL ARTICLE
James D Duncan, Mathabatha E Setati, Benoit Divol
Anaerobic alcoholic fermentation, particularly in high-sugar environments, presents metabolic challenges for yeasts. Crabtree-positive yeasts, including Saccharomyces cerevisiae, prefer fermentation even in the presence of oxygen. These yeasts rely on internal NAD+ recycling and extracellular assimilation of its precursor, nicotinic acid (vitamin B3), rather than de novo NAD+ production. Surprisingly, nicotinic acid assimilation is poorly characterised, even in S. cerevisiae. This study elucidated the timing of nicotinic acid uptake during grape juice-like fermentation and its impact on NAD(H) levels, the NAD+/NADH ratio, and metabolites produced...
April 18, 2024: FEMS Yeast Research
https://read.qxmd.com/read/38636727/methylated-urolithin-a-mitigates-cognitive-impairment-by-inhibiting-nlrp3-inflammasome-and-ameliorating-mitochondrial-dysfunction-in-aging-mice
#20
JOURNAL ARTICLE
Chen Peng, Yulai Wang, Jing Xie, Jiexin Lei, Benhong Zhou
Effective therapeutic interventions for elderly patients are lacking, despite advances in pharmacotherapy. Methylated urolithin A (mUro A), a modified ellagitannin (ET)-derived metabolite, exhibits anti-inflammatory, antioxidative, and anti-apoptotic effects. Current research has primarily investigated the neuroprotective effects of mUroA in aging mice and explored the underlying mechanisms. Our study used an in vivo aging model induced by D-galactose (D-gal) to show that mUro A notably improved learning and memory, prevented synaptic impairments by enhancing synaptic protein expression and increasing EPSCs, and reduced oxidative damage in aging mice...
April 16, 2024: Neuropharmacology
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