keyword
https://read.qxmd.com/read/38079525/applying-a-novel-kinomics-approach-to-study-decidualization-and-the-effects-of-antigestagens-using-a-canine-model
#21
JOURNAL ARTICLE
Isabelle De Geyter, Mariusz P Kowalewski, Miguel Tavares Pereira
Maternal decidual cells are crucial for the maintenance of canine pregnancy as they are the only cells expressing the nuclear progesterone (P4) receptor (PGR) in the placenta. Interfering with P4/PGR signaling adversely affects decidual cells and terminates pregnancy. Although immortalized dog uterine stromal (DUS) cells can be decidualized in vitro using cAMP, the involvement of cAMP-dependent kinases in canine decidualization had not been investigated. Therefore, the present project investigated changes in the kinome of DUS cells following in vitro decidualization, using the serine/threonine kinase (STK) PamChip assay (PamGene)...
December 11, 2023: Biology of Reproduction
https://read.qxmd.com/read/38078089/identification-of-the-cdpk-gene-family-in-patchouli-and-functional-analysis-in-response-to-continuous-cropping-stress
#22
JOURNAL ARTICLE
Xiaofeng Liu, Muhammad Zeeshan Ul Haq, Jing Yu, Ya Liu, Huageng Yang, Hongguang Cui, Dongmei Yang, Yougen Wu
To further reveal the molecular mechanisms underlying the formation of continuous cropping disorders in patchouli, this study analyzed the function of calcium dependent protein kinase ( CDPK ) genes at the molecular level in patchouli continuous cropping disorders. The findings unveiled the presence of 45 PcCDPK genes within the complete patchouli genome dataset. These genes exhibited a range of molecular weights from 50.78 to 78.96 kDa and aliphatic index values spanning from 74.42 to 88.49, and are shown to be hydrophilic proteins...
2023: Frontiers in Plant Science
https://read.qxmd.com/read/38070860/the-inhibition-of-vdac1-oligomerization-promotes-pigmentation-through-the-camk-crtcs-creb-mitf-pathway
#23
JOURNAL ARTICLE
Jinpeng Lv, Ximei Zhang, Xiaohong An, Yan Cao, Duo Meng, Kun Zou, Rongyin Gao, Ruzhi Zhang
The voltage-dependent anion channel 1 (VDAC1) forms an oligomeric structure on the mitochondrial outer membrane, which plays critical roles in many physiological processes. Research studies have demonstrated that the knockout of VDAC1 increases pigment content and up-regulates the expression of melanogenic genes. Due to its involvement in various physiological processes, the depletion of VDAC1 has significant detrimental effects on cellular functions and the inhibition of VDAC1 oligomerization has recently emerged as a promising strategy for the treatment of several diseases...
December 7, 2023: Experimental Cell Research
https://read.qxmd.com/read/37938180/6-day-dry-immersion-leads-to-downregulation-of-slow-fiber-type-and-mitochondria-related-genes-expression
#24
JOURNAL ARTICLE
Kristina A Sharlo, Natalia A Vilchinskaya, Sergey A Tyganov, Olga V Turtikova, Irina D Lvova, Ksenia V Sergeeva, Ilya V Rukavishnikov, Boris S Shenkman, Elena S Tomilovskaya, Oleg I Orlov
The soleus muscle in humans is responsible for maintaining an upright posture and participates in walking and running. Under muscle disuse, it undergoes molecular signaling changes that result in altered force and work capacity. The triggering mechanisms and pathways of these changes are not yet fully understood. In this article, we aimed to detect the molecular pathways that are involved in the unloading-induced alterations in the human soleus muscle under 6-days of dry immersion. A 6-day dry immersion led to the downregulation of mitochondrial biogenesis and dynamics markers, upregulation of calcium-dependent CaMK II phosphorylation, enhanced PGC1α promoter region methylation and altered muscle micro-RNA expression, without affecting p-AMPK content or fiber-type transformation...
November 8, 2023: American Journal of Physiology. Endocrinology and Metabolism
https://read.qxmd.com/read/37926156/hsc70-phosphorylation-patterns-and-calmodulin-regulate-ap2-ccv-life-span-for-cell-adhesion-protein-transport
#25
JOURNAL ARTICLE
G F Sengül, R Mishra, E Candiello, P Schu
AP2 forms AP2 CCV with clathrin and over 60 additional coat proteins. Due to this complexity, we have a limited understanding of CCV life cycle regulation. Synapses contain canonical AP2 CCV, canCCV, and more stable, thereby longer lived, AP2 CCV. The more stable AP2 CCV can be distinguished from canCCV due to the stable binding of Hsc70 to clathrin. The AP1/σ1B complex knockout leads to impaired synaptic vesicle recycling and altered endosomal protein sorting. This causes as a secondary phenotype the twofold upregulation of endocytosis by canCCV and by more stable AP2 CCV...
November 3, 2023: Biochimica et Biophysica Acta. Molecular Cell Research
https://read.qxmd.com/read/37924386/resolvin-d1-induces-mtor-independent-and-atg5-dependent-autophagy-in-bv-2-microglial-cells
#26
JOURNAL ARTICLE
Shang-Wen Pan, Li-Sha Hu, Han Wang, Rui-Ting Li, Ya-Jun He, You Shang, Zhong-Liang Dai, Li-Xin Chen, Wei Xiong
OBJECTIVE: The activation state of microglia is known to occupy a central position in the pathophysiological process of cerebral inflammation. Autophagy is a catabolic process responsible for maintaining cellular homeostasis. In recent years, autophagy has been demonstrated to play an important role in neuroinflammation. Resolvin D1 (RvD1) is a promising therapeutic mediator that has been shown to exert substantial anti-inflammatory and proresolving activities. However, whether RvD1-mediated resolution of inflammation in microglia is related to autophagy regulation needs further investigation...
November 4, 2023: Current Medical Science
https://read.qxmd.com/read/37883155/mechanistic-and-evolutionary-insights-into-isoform-specific-supercharging-in-dclk-family-kinases
#27
JOURNAL ARTICLE
Aarya Venkat, Grace Watterson, Dominic P Byrne, Brady O'Boyle, Safal Shrestha, Nathan Gravel, Emma E Fairweather, Leonard A Daly, Claire Bunn, Wayland Yeung, Ishan Aggarwal, Samiksha Katiyar, Claire E Eyers, Patrick A Eyers, Natarajan Kannan
Catalytic signaling outputs of protein kinases are dynamically regulated by an array of structural mechanisms, including allosteric interactions mediated by intrinsically disordered segments flanking the conserved catalytic domain. The doublecortin-like kinases (DCLKs) are a family of microtubule-associated proteins characterized by a flexible C-terminal autoregulatory 'tail' segment that varies in length across the various human DCLK isoforms. However, the mechanism whereby these isoform-specific variations contribute to unique modes of autoregulation is not well understood...
October 26, 2023: ELife
https://read.qxmd.com/read/37852420/activating-ryanodine-receptor-improves-isoflurane-induced-cognitive-dysfunction
#28
JOURNAL ARTICLE
Binwen Liu, Xurui Zhu, Qingyun Zhou, Yan Su, Yue Qian, Zhengliang Ma, Xiaoping Gu, Tianjiao Xia
BACKGROUND: Postoperative cognitive dysfunction (POCD) is characterized by impaired learning and memory. 6hour duration isoflurane anesthesia is an important factor to induce POCD, and the dysfunction of ryanodine receptor (RyR) in the hippocampus may be involved in this process. We investigated the expression of RyR3 in the hippocampus of mice after 6-h duration isoflurane anesthesia, as well as the improvement of RyR receptor agonist caffeine on POCD mice, while attempting to identify the underlying molecular mechanism...
October 16, 2023: Brain Research Bulletin
https://read.qxmd.com/read/37848119/hippocampal-tandem-mass-tag-tmt-proteomics-analysis-during-kindling-epileptogenesis-in-rat
#29
JOURNAL ARTICLE
Elahe Dashtban-Moghadam, Shima Khodaverdian, Bahareh Dabirmanesh, Javad Mirnajafi-Zadeh, Amir Shojaei, Mehdi Mirzaie, Peyman Choopanian, Mona Atabakhshi-Kashi, Yaghoub Fatholahi, Khosro Khajeh
Epilepsy is a neurological disorder that remains difficult to treat due to the lack of a clear molecular mechanism and incomplete understanding of involved proteins. To identify potential therapeutic targets, it is important to gain insight into changes in protein expression patterns related to epileptogenesis. One promising approach is to analyze proteomic data, which can provide valuable information about these changes. In this study, to evaluate the changes in gene expression during epileptogenesis, LC-MC2 analysis was carried out on hippocampus during stages of electrical kindling in rat models...
October 15, 2023: Brain Research
https://read.qxmd.com/read/37781015/calmodulin-calcium-calmodulin-dependent-kinases-1-and-2-regulate-expression-of-the-heat-shock-proteins-for-heat-shock-tolerance-and-pheromone-signaling-genes-for-sexual-development-in-neurospora-crassa
#30
JOURNAL ARTICLE
Christy Noche K Marak, Ranjan Tamuli
UNLABELLED: Calmodulin (CaM) is a primary Ca2+ sensor that binds and activates numerous target proteins and regulates several cellular processes in eukaryotes. CaM is essential in Neurospora crassa ; therefore, we generated a CaM mutant using repeat-induced point (RIP) mutation and investigated the cmd RIP mutant phenotypes. We also studied knockout mutants of four Ca2+ /CaM kinases ( camk-1 , 2 , 3 , and 4 ) for their role during stress conditions and sexual development. The cmd RIP , ∆ camk-1 , and ∆ camk-2 mutants showed reduced survival and growth rates under heat stress, oxidative stress, pH, and ER stress conditions...
September 2023: Indian Journal of Microbiology
https://read.qxmd.com/read/37779034/3-iodothyronamine-a-trace-amine-associated-receptor-agonist-regulates-intracellular-ca2-increases-via-camk-ii-through-epac2-in-rat-cerebral-arterioles
#31
JOURNAL ARTICLE
Wakana Sakanoue, Takuya Yokoyama, Masato Hirakawa, Satsuki Maesawa, Kenichi Sato, Tomoyuki Saino
Trace amines (TAs) in the nervous system bind to TA-associated receptors (TAARs) and are involved in the regulation of monoaminergic functions. Among TAAR subtypes, TAAR1 has been implicated in the development of neurological disorders, such as schizophrenia. The present study investigated the effects of the TAAR1 agonist, 3-iodothyronamine (T1AM) on cerebral arterioles using fluctuations in the intracellular concentration of Ca2+ ([Ca2+]i) as an index of contractile responses. In cerebral arterioles, most of the TAAR agonists did not increase [Ca2+]i, while only T1AM elevated [Ca2+]i in vascular smooth muscle cells...
2023: Biomedical Research
https://read.qxmd.com/read/37762672/stachydrine-hydrochloride-regulates-the-nox2-ros-signaling-axis-in-pressure-overload-induced-heart-failure
#32
JOURNAL ARTICLE
Shuang Lu, Yueyang Liang, Songru Yang, Mengwei Fu, Xiaoli Shan, Chen Zhang, Huihua Chen, Pei Zhao, Rong Lu
Our previous studies revealed the protection of stachydrine hydrochloride (STA) against cardiopathological remodeling. One of the underlying mechanisms involves the calcium/calmodulin-dependent protein kinase Ⅱ (CaMKII). However, the way STA influences CaMKII needs to be further investigated. The nicotinamide adenine dinucleotide phosphate oxidase 2 (NOX2)-coupled reactive oxygen species (ROS) overproduction putatively induces the oxidative activation of CaMKII, resulting in the occurrence of pathological cardiac remodeling and dysfunction in experimental models of mice...
September 21, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/37759754/the-effect-of-serca-activation-on-functional-characteristics-and-signaling-of-rat-soleus-muscle-upon-7-days-of-unloading
#33
JOURNAL ARTICLE
Kristina A Sharlo, Irina D Lvova, Sergey A Tyganov, Ksenia A Zaripova, Svetlana P Belova, Tatiana Y Kostrominova, Boris S Shenkman, Tatiana L Nemirovskaya
Skeletal muscle abnormalities and atrophy during unloading are accompanied by the accumulation of excess calcium in the sarcoplasm. We hypothesized that calcium accumulation may occur, among other mechanisms, due to the inhibition of sarco/endoplasmic reticulum Ca2+ -ATPase (SERCA) activity. Consequently, the use of the SERCA activator will reduce the level of calcium in the sarcoplasm and prevent the negative consequences of muscle unloading. Wistar rats were randomly assigned into one of three groups (eight rats per group): control rats with placebo (C), 7 days of unloading/hindlimb suspension with placebo (7HS), and 7 days of unloading treated with SERCA activator CDN1163 (7HSC)...
September 6, 2023: Biomolecules
https://read.qxmd.com/read/37750331/elevated-extracellular-calcium-ions-accelerate-the-proliferation-and-migration-of-hepg2-cells-and-decrease-cisplatin-sensitivity
#34
JOURNAL ARTICLE
Haozhe Xu, Yiming Zhou, Jing Guo, Tao Ling, Yujie Xu, Ting Zhao, Chuanxin Shi, Zhongping Su, Qiang You
Hepatoblastoma is the most frequent liver malignancy in children. HepG2 has been discovered as a hepatoblastoma-derived cell line and tends to form clumps in culture. Intriguingly, we observed that the addition of calcium ions reduced cell clumping and disassociated HepG2 cells. The calcium signal is in connection with a series of processes critical in the tumorigenesis. Here, we demonstrated that extracellular calcium ions induced morphological changes and enhanced the epithelial-mesenchymal transition in HepG2 cells...
September 10, 2023: Journal of Biomedical Research
https://read.qxmd.com/read/37726995/-effect-and-mechanism-of-1-25-oh-2-d-3-on-myocardial-inflammation-induced-by-coxsackie-virus-b3-in-mice
#35
JOURNAL ARTICLE
Y Y Liu, M J Dong, Y L Bo, Z H Cui
Objective: To explore the effect and mechanism of 1, 25(OH)2 D3 on myocardial inflammation induced by Coxsackie virus B3 (CVB3) in mice. Methods: Wild type (WT) and 1α-hydroxylase knockout [1(OH)ase-/- ] male mice were divided into four groups: WT group, WT+CVB3 group, 1(OH)ase-/- +CVB3 group and 1(OH)ase-/- +CVB3+VD3 group, with 8 mice in each group. The indicators for evaluating myocardial cell injury were examined by different methods. The mRNA levels of pro-inflammatory cytokines [interlenkin (IL)-1β, IL-6, interferon γ (IFN-γ) and tumor necrosis factor α (TNF-α)] were determined by quantitative real-time PCR...
September 26, 2023: Zhonghua Yi Xue za Zhi [Chinese medical journal]
https://read.qxmd.com/read/37724511/gene-editing-of-putative-camp-and-ca-2-regulated-proteins-using-an-efficient-cloning-free-crispr-cas9-system-in-trypanosoma-cruzi
#36
JOURNAL ARTICLE
Miguel A Chiurillo, Milad Ahmed, César González, Aqsa Raja, Noelia Lander
Trypanosoma cruzi, the agent of Chagas disease, must adapt to a diversity of environmental conditions that it faces during its life cycle. The adaptation to these changes is mediated by signaling pathways that coordinate the cellular responses to the new environmental settings. Cyclic AMP (cAMP) and Calcium (Ca2+ ) signaling pathways regulate critical cellular processes in this parasite, such as differentiation, osmoregulation, host cell invasion and cell bioenergetics. Although the use of CRISPR/Cas9 technology prompted reverse genetics approaches for functional analysis in T...
September 19, 2023: Journal of Eukaryotic Microbiology
https://read.qxmd.com/read/37601281/lipidation-states-orchestrate-click-iii-camki%C3%AE-s-stepwise-association-with-golgi-and-rafts-enriched-membranes-and-specify-its-functional-coupling-to-stef-rac1-dependent-neurite-extension
#37
JOURNAL ARTICLE
Natsumi Ageta-Ishihara, Sayaka Takemoto-Kimura, Yayoi Kondo, Michiko Okamura, Haruhiko Bito
CLICK-III/CaMKIγ is a lipid-anchored neuronal isoform of multifunctional Ca2+ /calmodulin-dependent protein kinases, which mediates BDNF-dependent dendritogenesis in cultured cortical neurons. We found that two distinct lipidation states of CaMKIγ, namely, prenylation and palmitoylation, controlled its association with detergent-resistant microdomains in the dendrites and were essential for its dendritogenic activity. However, the impact of each lipid modification on membrane targeting/trafficking and how it specifies functional coupling leading to polarized changes in neuronal morphology are not clear...
2023: Frontiers in Cellular Neuroscience
https://read.qxmd.com/read/37595869/neuronal-sam68-differentially-regulates-alternative-last-exon-splicing-and-ensures-proper-synapse-development-and-function
#38
JOURNAL ARTICLE
Mohamed Darwish, Masatoshi Ito, Yoko Iijima, Akinori Takase, Noriko Ayukawa, Satoko Suzuki, Masami Tanaka, Kanae Komori, Daisuke Kaida, Takatoshi Iijima
Alternative splicing in the 3' untranslated region (3'UTR) of mammalian genes plays a crucial role in diverse biological processes, including cell differentiation and development. SAM68 is a key splicing regulator that controls the diversity of 3'UTR isoforms through alternative last exon (ALE) selection. However, the tissue/cell type-specific mechanisms underlying the splicing control at the 3' end and its functional significance remain unclear. Here, we show that SAM68 regulates ALE splicing in a dose-dependent manner and the neuronal splicing is differentially regulated depending on the characteristics of the target transcript...
August 16, 2023: Journal of Biological Chemistry
https://read.qxmd.com/read/37543295/electroacupuncture-attenuates-ketamine-induced-neuronal-injury-in-the-locus-coeruleus-of-rats-through-modulation-of-the-camk-ii-creb-pathway
#39
JOURNAL ARTICLE
Huachun Miao, Runzhi Li, Wenjuan Li, Feng Wu, Huaibin Li, Hong Luo
BACKGROUND: Ketamine, despite its efficacy in treating depression, raises concerns regarding safety due to potential abuse, cognitive impairment, and bladder toxicity. Ketamine can affect the locus coeruleus (LC) norepinephrine and attention networks. This study explored the protective effects of electroacupuncture (EA) on the LC of rats exposed to repeated administration of ketamine while investigating the potential role of the Calcium CaM-dependent protein kinase II (CAMK II)/ cAMP response element binding protein (CREB) pathway in mediating EA's impact on ketamine-induced neuronal injury in LC...
August 3, 2023: Brain Research Bulletin
https://read.qxmd.com/read/37539272/loss-of-flot2-expression-in-deep-cerebellar-nuclei-neurons-of-mice-with-niemann-pick-disease-type-c
#40
JOURNAL ARTICLE
Tsu-I Chen, Pei-Chun Hsu, Ni-Chung Lee, Yu-Han Liu, Hao-Chun Wang, Yen-Hsu Lu, Yin-Hsiu Chien, Wuh-Liang Hwu
Niemann-Pick disease type C (NPC) is caused by a deficiency of the NPC1 or NPC2 gene, leading to storages of unesterified cholesterol and sphingolipids. Cerebellar ataxia is a main symptom of NPC and the deep cerebellar nuclei (DCN) is the sole signal output of the cerebellum. In this study, we explored the pathological changes in DCN neurons of Npc1 knockout mice ( Npc1 - ). We first demonstrated that DCN neurons of Npc1 - mice had prominent ganglioside GM2 accumulation in the late endosomes but not in the lysosomes...
July 2023: Heliyon
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