keyword
https://read.qxmd.com/read/38423760/linear-and-nonlinear-behaviors-of-the-photoreceptor-coupled-network
#21
JOURNAL ARTICLE
Ji-Jie Pang, Xiaolong Jiang, Samuel M Wu
Photoreceptors are electrically coupled to one another, and the spatiotemporal properties of electrical synapses in a two-dimensional retinal network are still not well-studied, because of the limitation of the single electrode or pair recording techniques which do not allow simultaneously measuring responses of multiple photoreceptors at various locations in the retina. A multiple electrode recording system is needed. In this study we investigate the network properties of the two-dimensional rod coupled array of the salamander retina (both sexes were used) by using the newly available multiple patch electrode system that allows simultaneous recordings from up to 8 cells, and to determine the electrical connectivity among multiple rods...
February 29, 2024: Journal of Neuroscience
https://read.qxmd.com/read/38414572/habitat-selection-and-refuge-use-by-a-color-polymorphic-salamander-reveal-behavioral-niche-differences
#22
JOURNAL ARTICLE
Cory S Straub, Rosella G Cuomo, Gabriel Jimenez
Color polymorphic species provide an excellent opportunity to investigate the ecology and evolution of intraspecific niche differences. The red-backed salamander, Plethodon cinereus , is a fully terrestrial lungless salamander with two common color forms, striped and unstriped. Previous research suggests the morphs may be differentially adapted to surface and subsurface microhabitats, with the unstriped morph being more fossorial. This hypothesis predicts that the unstriped morph should be more sensitive to the risks of surface activity (e...
February 2024: Ecology and Evolution
https://read.qxmd.com/read/38411930/freshwater-megafauna-shape-ecosystems-and-facilitate-restoration
#23
JOURNAL ARTICLE
Fengzhi He, Jens-Christian Svenning, Xing Chen, Klement Tockner, Tobias Kuemmerle, Elizabeth le Roux, Marcos Moleón, Jörn Gessner, Sonja C Jähnig
Freshwater megafauna, such as sturgeons, giant catfishes, river dolphins, hippopotami, crocodylians, large turtles, and giant salamanders, have experienced severe population declines and range contractions worldwide. Although there is an increasing number of studies investigating the causes of megafauna losses in fresh waters, little attention has been paid to synthesising the impacts of megafauna on the abiotic environment and other organisms in freshwater ecosystems, and hence the consequences of losing these species...
February 27, 2024: Biological Reviews of the Cambridge Philosophical Society
https://read.qxmd.com/read/38411067/draft-genome-sequences-of-21-pedobacter-strains-isolated-from-amphibian-specimens
#24
JOURNAL ARTICLE
Celine M Zumkeller, Molly C Bletz, Andolalao Rakotoarison, Joana Sabino-Pinto, Silke Reiter, Marius Spohn, Oliver Schwengers, Alexander Goesmann, Miguel Vences, Sanja Mihajlovic, Till F Schäberle
The genomes of 21 Pedobacter strains isolated from the European salamander Salamandra salamandra and different Madagascan frog species were sequenced using Illumina sequencing. Here, we report their draft genome sequences (~4.7-7.2 Mbp in size) to allow comparative genomics and taxonomic assignment of these strains.
February 27, 2024: Microbiology Resource Announcements
https://read.qxmd.com/read/38405673/morbidity-in-california-giant-salamander-dicamptodon-ensatus-eschscholtz-1833-caused-by-euryhelmis-sp-poche-1926-trematoda-heterophyiidae
#25
Jaimie L Miller, Lawrence Erickson, Susanne Fork, Constance L Roderick, Daniel A Grear, Rebecca A Cole
In the fall of 2021, California Department of Fish and Wildlife reported larval and adult California giant salamanders ( Dicamptodon ensatus Eschscholtz, 1833) with skin lesions at multiple creeks in Santa Clara and Santa Cruz Counties, California, USA. Field signs in both stages included rough, lumpy textured skin, and larvae with tails that were disproportionately long, flat, wavy, and flaccid. Presence of large-bodied larvae suggested delayed metamorphosis, with some larvae having cloudy eyes and suspected blindness...
April 2024: International Journal for Parasitology. Parasites and Wildlife
https://read.qxmd.com/read/38399250/antiviral-action-against-sars-cov-2-of-a-synthetic-peptide-based-on-a-novel-defensin-present-in-the-transcriptome-of-the-fire-salamander-salamandra-salamandra
#26
JOURNAL ARTICLE
Ana Luisa A N Barros, Vladimir C Silva, Atvaldo F Ribeiro-Junior, Miguel G Cardoso, Samuel R Costa, Carolina B Moraes, Cecília G Barbosa, Alex P Coleone, Rafael P Simões, Wanessa F Cabral, Raul M Falcão, Andreanne G Vasconcelos, Jefferson A Rocha, Daniel D R Arcanjo, Augusto Batagin-Neto, Tatiana Karla S Borges, João Gonçalves, Guilherme D Brand, Lucio H G Freitas-Junior, Peter Eaton, Mariela Marani, Massuo J Kato, Alexandra Plácido, José Roberto S A Leite
The potential emergence of zoonotic diseases has raised significant concerns, particularly in light of the recent pandemic, emphasizing the urgent need for scientific preparedness. The bioprospection and characterization of new molecules are strategically relevant to the research and development of innovative drugs for viral and bacterial treatment and disease management. Amphibian species possess a diverse array of compounds, including antimicrobial peptides. This study identified the first bioactive peptide from Salamandra salamandra in a transcriptome analysis...
January 29, 2024: Pharmaceutics
https://read.qxmd.com/read/38382821/spatial-genetic-structure-in-european-marbled-newts-revealed-with-target-enrichment-by-sequence-capture
#27
JOURNAL ARTICLE
Christos Kazilas, Christophe Dufresnes, James France, Konstantinos Kalaentzis, Iñigo Martínez-Solano, Manon C de Visser, Jan W Arntzen, Ben Wielstra
European marbled newts come in two species that have abutting ranges. The northern species, Triturus marmoratus, is found in France and the northern part of the Iberian Peninsula whereas the southern species, T. pygmaeus, is found in the southwestern corner of the Iberian Peninsula. We study the intraspecific genetic differentiation of the group because morphological data show geographical variation and because the Iberian Peninsula is a recognized center of speciation and intraspecific genetic diversity for all kinds of organisms, amphibians included...
February 19, 2024: Molecular Phylogenetics and Evolution
https://read.qxmd.com/read/38354179/phylogenetic-relationships-and-genetic-differentiation-of-two-salamandrella-species-as-revealed-via-coi-gene-from-northeastern-china
#28
JOURNAL ARTICLE
Wanli Liu, Zhuo Duan, Dingcheng Wang, Wenge Zhao, Peng Liu
Due to traditional classification methods' limitations, some cryptic species remain undiscovered. To better explore the existence of the Schrenck salamander (Salamandrella tridactyla, a cryptic species of Siberian salamander S. keyserlingii) in China, we conducted a molecular phylogenetic analysis to confirm the taxonomic relationship among Salamandrella species and investigate genetic variation. We used complete sequences of the mitochondrial COI gene from 65 specimens collected across a wide range in Northeastern China...
2024: PloS One
https://read.qxmd.com/read/38349154/herptile-gut-microbiomes-a-natural-system-to-study-multi-kingdom-interactions-between-filamentous-fungi-and-bacteria
#29
JOURNAL ARTICLE
Lluvia Vargas-Gastélum, Alexander S Romer, Marjan Ghotbi, Jason W Dallas, N Reed Alexander, Kylie C Moe, Kerry L McPhail, George F Neuhaus, Leila Shadmani, Joseph W Spatafora, Jason E Stajich, Javier F Tabima, Donald M Walker
Reptiles and amphibians (herptiles) are some of the most endangered and threatened species on the planet and numerous conservation strategies are being implemented with the goal of ensuring species recovery. Little is known, however, about the gut microbiome of wild herptiles and how it relates to the health of these populations. Here, we report results from the gut microbiome characterization of both a broad survey of herptiles, and the correlation between the fungus Basidiobolus , and the bacterial community supported by a deeper, more intensive sampling of Plethodon glutinosus , known as slimy salamanders...
February 13, 2024: MSphere
https://read.qxmd.com/read/38320446/a-time-course-transcriptome-analysis-revealing-the-potential-molecular-mechanism-of-early-gonadal-differentiation-in-the-chinese-giant-salamander
#30
JOURNAL ARTICLE
Shijun Yang, Xiong Tang, Fan Yan, Han Yang, Lishan Xu, Zhijie Jian, Huidan Deng, Qu He, Guangxiang Zhu, Qin Wang
The Chinese giant salamander (CGS) Andrias davidianus is the largest extant amphibian and has recently become an important species for aquaculture with high economic value. Meanwhile, its wild populations and diversity are in urgent need of protection. Exploring the mechanism of its early gonadal differentiation will contribute to the development of CGS aquaculture and the recovery of its wild population. In this study, transcriptomic and phenotypic research was conducted on the critical time points of early gonadal differentiation of CGS...
February 2, 2024: Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics
https://read.qxmd.com/read/38319134/the-salamander-limb-a-perfect-model-to-understand-imperfect-integration-during-skeletal-regeneration
#31
JOURNAL ARTICLE
Camilo Riquelme-Guzmán, Tatiana Sandoval-Guzmán
Limb regeneration in salamanders is achieved by a complex coordination of various biological processes and requires the proper integration of new tissue with old. Among the tissues found inside the limb, the skeleton is the most prominent component, which serves as a scaffold and provides support for locomotion in the animal. Throughout the years, researchers have studied the regeneration of the appendicular skeleton in salamanders both after limb amputation and as a result of fracture healing. The final outcome has been widely seen as a faithful re-establishment of the skeletal elements, characterised by a seamless integration into the mature tissue...
February 15, 2024: Biology Open
https://read.qxmd.com/read/38303165/concurrent-threats-and-extinction-risk-in-a-long-lived-highly-fecund-vertebrate-with-parental-care
#32
JOURNAL ARTICLE
George C Brooks, William A Hopkins, Holly K Kindsvater
Detecting declines and quantifying extinction risk of long-lived, highly fecund vertebrates, including fishes, reptiles, and amphibians, can be challenging. In addition to the false notion that large clutches always buffer against population declines, the imperiled status of long-lived species can often be masked by extinction debt, wherein adults persist on the landscape for several years after populations cease to be viable. Here we develop a demographic model for the eastern hellbender (Cryptobranchus alleganiensis), an imperiled aquatic salamander with paternal care...
February 1, 2024: Ecological Applications
https://read.qxmd.com/read/38297026/discovery-of-ex-situ-individuals-of-andrias-sligoi-an-extremely-endangered-species-and-one-of-the-largest-amphibians-worldwide
#33
JOURNAL ARTICLE
Kanto Nishikawa, Masafumi Matsui, Natsuhiko Yoshikawa, Atsushi Tominaga, Koshiro Eto, Ibuki Fukuyama, Kazumi Fukutani, Kohei Matsubara, Yasunari Hattori, Shohei Iwato, Tsukasa Sato, Zenkichi Shimizu, Hirokazu Onuma, Sotaro Hara
The South China giant salamander, Andrias sligoi, is one of the largest extant amphibian species worldwide. It was recently distinguished from another Chinese species, the Chinese giant salamander, Andrias davidianus, which is considered Critically Endangered according to the International Union for Conservation of Nature (IUCN) Red List. It appears too late to save this extremely rare and large amphibian in situ. Another extant species of the same genus, Andrias japonicus, inhabits Japan. However, the introduction of Chinese giant salamanders into some areas of Japan has resulted in hybridization between the Japanese and Chinese species...
January 31, 2024: Scientific Reports
https://read.qxmd.com/read/38293638/the-habitat-quality-paradox-loss-of-riparian-forest-cover-leads-to-decreased-risk-of-parasitism-and-improved-body-condition-in-an-imperiled-amphibian
#34
JOURNAL ARTICLE
Catherine M Bodinof Jachowski, Valentina Alaasam, Arden Blumenthal, Andrew K Davis, William A Hopkins
Amphibian declines are a global phenomenon but responses of populations to specific threats are often context dependent and mediated by individual physiological condition. Habitat degradation due to reduced riparian forest cover and parasitism are two threats facing the hellbender salamander ( Cryptobranchus alleganiensis ), but their potential to interact in nature remains largely unexplored. We investigated associations between forest cover, parasitic infection and physiology of hellbenders to test the hypotheses that physiological condition responds to infection and/or habitat degradation...
2024: Conservation Physiology
https://read.qxmd.com/read/38293071/farms-framework-for-animal-and-robot-modeling-and-simulation
#35
Jonathan Arreguit, Shravan Tata Ramalingasetty, Auke Ijspeert
The study of animal locomotion and neuromechanical control offers valuable insights for advancing research in neuroscience, biomechanics, and robotics. We have developed FARMS (Framework for Animal and Robot Modeling and Simulation), an open-source, interdisciplinary framework, designed to facilitate access to neuromechanical simulations for modeling, simulation, and analysis of animal locomotion and bio-inspired robotic systems. By providing an accessible and user-friendly platform, FARMS aims to lower the barriers for researchers to explore the complex interactions between the nervous system, musculoskeletal structures, and their environment...
September 26, 2023: bioRxiv
https://read.qxmd.com/read/38279640/polyphenism-predicts-actuarial-senescence-and-lifespan-in-tiger-salamanders
#36
JOURNAL ARTICLE
Hugo Cayuela, Alycia C R Lackey, Victor Ronget, Benjamin Monod-Broca, Howard H Whiteman
Actuarial senescence (called 'senescence' hereafter) often shows broad variation at the intraspecific level. Phenotypic plasticity likely plays a central role in among-individual heterogeneity in senescence rate (i.e. the rate of increase in mortality with age), although our knowledge on this subject is still very fragmentary. Polyphenism-the unique sub-type of phenotypic plasticity where several discrete phenotypes are produced by the same genotype-may provide excellent study systems to investigate if and how plasticity affects the rate of senescence in nature...
January 27, 2024: Journal of Animal Ecology
https://read.qxmd.com/read/38251264/zootoxins-and-domestic-animals-a-european-view
#37
REVIEW
Andras-Laszlo Nagy, Sabrina Ardelean, Ronan J J Chapuis, Juliette Bouillon, Dalma Pivariu, Beatrice De Felice, Mirko Bertazzo, Paola Fossati, Leon J Spicer, Alexandra Iulia Dreanca, Francesca Caloni
Zootoxins are produced by venomous and poisonous species and are an important cause of poisoning in companion animals and livestock in Europe. Little information about the incidence of zootoxin poisoning is available in Europe, with only a few case reports and review papers being published. This review presents the most important zootoxins produced by European venomous and poisonous animal species responsible for poisoning episodes in companion animals and livestock. The main zootoxin-producing animal species, components of the toxins/venoms and their clinical effects are presented...
January 16, 2024: Toxins
https://read.qxmd.com/read/38224483/taxonomy-and-nomenclature-of-oophila-amblystomatis-chlorophyceae-chlamydomonadales
#38
JOURNAL ARTICLE
Cory D Bishop, David J Garbary
The unicellular green alga Oophila amblystomatis was named by Lambert in 1905 based upon its association with egg masses of the spotted salamander Ambystoma maculatum. We collected algal cells from Lambert's original egg capsule preparations that were contributed to Phycotheca Boreali-Americana (PBA) in 1905 and subjected them to DNA extraction and PCR with O. amblystomatis-specific 18S rRNA gene primers. DNA amplified from these preparations was cloned and nine clones were sequenced. Along with representative sequences from the Oophila clade and Chlorophyceae, a phylogenetic tree was inferred...
January 15, 2024: Journal of Phycology
https://read.qxmd.com/read/38222983/non-native-earthworms-increase-the-abundance-and-diet-quality-of-a-common-woodland-salamander-in-its-northern-range
#39
JOURNAL ARTICLE
Trevor Scott, Robert L Bradley, Patrice Bourgault
UNLABELLED: Non-native earthworms found in Eastern Canada substantially affect soil properties and plant diversity, but less is known about their impacts on higher faunal species. We investigated the effects of non-native earthworms on populations of Plethodon cinereus , a common woodland salamander. We hypothesized that earthworms could adversely affect P. cinereus by consuming the forest floor, thereby decreasing soil moisture and the abundance of native preys. Conversely, earthworms could positively affect P...
2024: Biological Invasions
https://read.qxmd.com/read/38221056/taxonomic-reassessment-of-salamanders-genus-hynobius-from-tsushima-islands-japan-with-a-resurrection-of-hynobius-tagoi-dunn-1923-amphibia-caudata
#40
JOURNAL ARTICLE
Keita Niwa, Kanto Nishikawa, Masafumi Matsui, Sally Kanamori, Masaki Kuro-O
To clarify the taxonomic status of salamanders from Tsushima Islands, Japan, we examined two species of salamanders, Hynobius tsuensis and Hynobius sp. from Tsushima Islands, and compared them with H. nebulosus from Kyushu. We found that the three taxa differ from each other in nuclear DNA, adult morphology, and egg-sac shape, and consider them to be independent species. Based on the investigation of type specimens of the synonyms, we identified Hynobius sp. as H. tagoi Dunn, 1923 and redescribe it herein. Also, we designate a neotype for H...
August 30, 2023: Zootaxa
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