keyword
https://read.qxmd.com/read/38197634/butyrate-valerate-and-niacin-ameliorate-anaphylaxis-by-suppressing-ige-dependent-mast-cell-activation-roles-of-gpr109a-pge2-and-epigenetic-regulation
#1
JOURNAL ARTICLE
Kazuki Nagata, Daisuke Ando, Tsubasa Ashikari, Kandai Ito, Ryosuke Miura, Izumi Fujigaki, Yuki Goto, Miki Ando, Naoto Ito, Hibiki Kawazoe, Yuki Iizuka, Mariko Inoue, Takuya Yashiro, Masakazu Hachisu, Kazumi Kasakura, Chiharu Nishiyama
Short-chain fatty acids (SCFAs) are produced by the intestinal microbiota during the fermentation of dietary fibers as secondary metabolites. Several recent studies reported that SCFAs modulate the development and function of immune-related cells. However, the molecular mechanisms by which SCFAs regulate mast cells (MCs) remain unclear. In the current study, we analyzed the function and gene expression of mouse MCs in the presence of SCFAs in vitro and in vivo. We found that the oral administration of valerate or butyrate ameliorated passive systemic anaphylaxis and passive cutaneous anaphylaxis in mice...
January 10, 2024: Journal of Immunology
https://read.qxmd.com/read/36986457/probiotic-fermented-camel-milk-attenuates-neurodegenerative-symptoms-via-sox5-mir-218-axis-orchestration-in-mouse-models
#2
JOURNAL ARTICLE
Ashraf Khalifa, Hairul Islam Mohamed Ibrahim, Abdullah Sheikh, Hany Ezzat Khalil
Multiple sclerosis is an autoimmune-mediated myelin damage disorder in the central nervous system that is widespread among neurological patients. It has been demonstrated that several genetic and epigenetic factors control autoimmune encephalomyelitis (EAE), a murine model of MS, through CD4+ T-cell population quantity. Alterations in the gut microbiota influence neuroprotectiveness via unexplored mechanisms. In this study, the ameliorative effect of Bacillus amyloliquefaciens fermented in camel milk (BEY) on an autoimmune-mediated neurodegenerative model using myelin oligodendrocyte glycoprotein/complete fraud adjuvant/pertussis toxin (MCP)-immunized C57BL6j mice is investigated...
February 25, 2023: Pharmaceuticals
https://read.qxmd.com/read/36876086/deep-longitudinal-multi-omics-analysis-of-bordetella-pertussis-cultivated-in-bioreactors-highlights-medium-starvations-and-transitory-metabolisms-associated-to-vaccine-antigen-biosynthesis-variations-and-global-virulence-regulation
#3
JOURNAL ARTICLE
Paul Anziani, Jérémie Becker, Charlotte Mignon, Nadège Arnaud-Barbe, Virginie Courtois, Marie Izac, Romain Pizzato, Joséphine Abi-Ghanem, Viet-Dung Tran, Magali Sarafian, Andrei Bunescu, Dominique Garnier, Eric Abachin, Geneviève Renauld-Mongénie, Cyril Guyard
Bordetella pertussis is the bacterial causative agent of whooping cough, a serious respiratory illness. An extensive knowledge on its virulence regulation and metabolism is a key factor to ensure pertussis vaccine manufacturing process robustness. The aim of this study was to refine our comprehension of B . pertussis physiology during in vitro cultures in bioreactors. A longitudinal multi-omics analysis was carried out over 26 h small-scale cultures of B . pertussis . Cultures were performed in batch mode and under culture conditions intending to mimic industrial processes...
2023: Frontiers in Microbiology
https://read.qxmd.com/read/36799126/modeling-the-effect-of-oxidative-stress-on-bordetella-pertussis-fermentations
#4
JOURNAL ARTICLE
Michael Vitelli, I Melih Tamer, Mark Pritzker, Hector Budman
A mathematical model is proposed for Bordetella pertussis with the main goal to better understand and describe the relation between cell growth, oxidative stress and NADPH levels under different oxidative conditions. The model is validated with flask experiments conducted under different conditions of oxidative stress induced by high initial glutamate concentrations, low initial inoculum and secondary culturing following exposure to starvation. The model exhibited good accuracy when calibrated and validated for the different experimental conditions...
February 17, 2023: Biotechnology Progress
https://read.qxmd.com/read/34822547/design-of-a-quantitative-lc-ms-method-for-residual-toxins-adenylate-cyclase-toxin-act-dermonecrotic-toxin-dnt-and-tracheal-cytotoxin-tct-in-bordetella-pertussis-vaccines
#5
JOURNAL ARTICLE
Lisa Szymkowicz, Jeffery Gerard, Benjamin Messham, Wai Wan Vivian Tam, D Andrew James
The antigens for acellular pertussis vaccines are made up of protein components that are purified directly from Bordetella pertussis (B. pertussis) bacterial fermentation. As such, there are additional B. pertussis toxins that must be monitored as residuals during process optimization. This paper describes a liquid chromatography mass spectrometry (LC-MS) method for simultaneous analysis of residual protein toxins adenylate cyclase toxin (ACT) and dermonecrotic toxin (DNT), as well as a small molecule glycopeptide, tracheal cytotoxin (TCT) in a Pertussis toxin vaccine antigen...
October 28, 2021: Toxins
https://read.qxmd.com/read/34332308/quantitative-microcapillary-electrophoresis-immunoassay-mce-ia-for-end-to-end-analysis-of-pertactin-within-in-process-samples-and-quadracel%C3%A2-vaccine
#6
JOURNAL ARTICLE
Diana Keizner, Shakiba Ghaffari, Samaneh Beheshti, Elena Newman, David Tulumello, Marina Kirkitadze, Michael Leach
Protein concentration is an important attribute in the production of subunit or component-based vaccine antigens. Rigorous monitoring of protein concentration is required to identify potential areas for yield improvement. The current GMP method for quantitation is the plate-based ELISA which requires numerous hands-on steps and has low sensitivity in comparison to new microfluidic systems. To address this issue, a sensitive automated microCapillary Electrophoresis ImmunoAssay (mCE IA) method was developed to accurately separate and quantitate pertactin (PRN), an important antigen of the modern acellular Pertussis (aP) vaccine...
July 26, 2021: Journal of Pharmaceutical and Biomedical Analysis
https://read.qxmd.com/read/33768674/isovaleric-acid-ameliorates-ovariectomy-induced-osteoporosis-by-inhibiting-osteoclast-differentiation
#7
JOURNAL ARTICLE
Kwang Min Cho, Ye Seon Kim, Mingyu Lee, Ha Young Lee, Yoe-Sik Bae
Osteoclasts (OCs) play important roles in bone remodelling and contribute to bone loss by increasing bone resorption activity. Excessively activated OCs cause diverse bone disorders including osteoporosis. Isovaleric acid (IVA), also known as 3-methylbutanoic acid is a 5-carbon branched-chain fatty acid (BCFA), which can be generated by bacterial fermentation of a leucine-rich diet. Here, we find that IVA suppresses differentiation of bone marrow-derived macrophages into OCs by RANKL. IVA inhibited the expression of OC-related genes...
March 25, 2021: Journal of Cellular and Molecular Medicine
https://read.qxmd.com/read/33195366/short-chain-fatty-acids-enhance-expression-and-activity-of-the-umami-taste-receptor-in-enteroendocrine-cells-via-a-g%C3%AE-i-o-pathway
#8
JOURNAL ARTICLE
Matilda Shackley, Yue Ma, Edward W Tate, Alastair J H Brown, Gary Frost, Aylin C Hanyaloglu
The short chain fatty acids (SCFAs) acetate, butyrate and propionate, are produced by fermentation of non-digestible carbohydrates by the gut microbiota and regulate appetite, adiposity, metabolism, glycemic control, and immunity. SCFAs act at two distinct G protein coupled receptors (GPCRs), FFAR2 and FFAR3 and are expressed in intestinal enteroendocrine cells (EECs), where they mediate anorectic gut hormone release. EECs also express other GPCRs that act as nutrient sensors, thus SCFAs may elicit some of their health-promoting effects by altering GPCR expression in EECs and enhance gut sensitivity to dietary molecules...
2020: Frontiers in Nutrition
https://read.qxmd.com/read/32858414/the-effects-of-manufacture-processes-on-post-translational-modifications-of-bioactive-proteins-in-pertussis-vaccine
#9
JOURNAL ARTICLE
Zhen Long, Chen Wei, Zhaoqi Zhan, Xiuling Li, Yueqi Li, Xiao Ma, Changkun Li, Lichan Wang, Taohong Huang
Because the increasing morbidity of pertussis in all age groups worldwide, the quality of pertussis vaccines has aroused a common concern. To improve the quality of pertussis vaccine in research and production, the effects of manufacture processes on post-translational modifications (PTMs) of bioactive proteins in pertussis vaccine were investigated by a liquid chromatography quadruple - time of flight mass spectrometer (LC-Q-TOF) method in this study. The main bioactive proteins in pertussis vaccine studied include pertussis toxin (PT), pertactin (PRN) and filamentous hemagglutinin (FHA)...
October 25, 2020: Journal of Pharmaceutical and Biomedical Analysis
https://read.qxmd.com/read/32812134/kombucha-ameliorates-experimental-autoimmune-encephalomyelitis-through-activation-of-treg-and-th2-cells
#10
JOURNAL ARTICLE
Dariush Haghmorad, Esmaeil Yazdanpanah, Bizhan Sadighimoghaddam, Bahman Yousefi, Pegah Sahafi, Narges Ghorbani, Ali Rashidy-Pour, Parviz Kokhaei
Multiple sclerosis (MS) is the most common inflammatory disorder of the central nervous system (CNS). Kombucha is produced by the fermentation of sugared tea with a symbiotic culture of bacteria and yeasts. This research was designed to reveal the therapeutic impact and the molecular and cellular processes determining the effect of kombucha on MS alleviation in an experimental autoimmune encephalomyelitis (EAE). The EAE was induced using myelin oligodendrocyte glycoprotein (MOG35-55 ) peptide emulsified in CFA and injected subcutaneously over two flank areas in C57BL/6 mice...
August 18, 2020: Acta Neurologica Belgica
https://read.qxmd.com/read/31483095/investigation-of-the-effects-of-oxidative-stress-inducing-factors-on-culturing-and-productivity-of-bordetella-pertussis
#11
JOURNAL ARTICLE
Vanessa Zavatti, Hector Budman, Raymond L Legge, Melih Tamer
The stress response of Bordetella pertussis during fermentation was assessed by means of fluorescence-based techniques. During the manufacturing of vaccines, B. pertussis is subjected to stress during adaptation to a new environment and operating conditions in the bioreactor, which can have harmful consequences on growth and protein yield. In this study, stress was imposed by varying the percentage of dissolved oxygen (DO) and inoculum size, and by adding rotenone and hydrogen peroxide. In this study, fluorescence spectroscopy is used as a tool for measuring oxidative stress...
January 2020: Biotechnology Progress
https://read.qxmd.com/read/31120900/metabolites-of-lactic-acid-bacteria-present-in-fermented-foods-are-highly-potent-agonists-of-human-hydroxycarboxylic-acid-receptor-3
#12
JOURNAL ARTICLE
Anna Peters, Petra Krumbholz, Elisabeth Jäger, Anna Heintz-Buschart, Mehmet Volkan Çakir, Sven Rothemund, Alexander Gaudl, Uta Ceglarek, Torsten Schöneberg, Claudia Stäubert
The interplay of microbiota and the human host is physiologically crucial in health and diseases. The beneficial effects of lactic acid bacteria (LAB), permanently colonizing the human intestine or transiently obtained from food, have been extensively reported. However, the molecular understanding of how LAB modulate human physiology is still limited. G protein-coupled receptors for hydroxycarboxylic acids (HCAR) are regulators of immune functions and energy homeostasis under changing metabolic and dietary conditions...
May 2019: PLoS Genetics
https://read.qxmd.com/read/30136189/optimization-of-rpdt-fusion-protein-expression-by-escherichia-coli-in-pilot-scale-fermentation-a-statistical-experimental-design-approach
#13
JOURNAL ARTICLE
Nasser Nassiri Koopaei, Parissa Khadiv-Parsi, Mohammad Reza Khoshayand, Mohammad Ali Mazlomi, Abbas Kebriaeezadeh, Hamid Moloudian, Roya Solhi, Mahdi Aminian
High yield recombinant protein production is highly desirable for biotechnological purposes. In the design of recombinant expression conditions, a number of essential central elements such as expression strain, type of medium, bioprocess optimization, and mathematical modeling should be considered. Well-designed industrial scale production of one recombinant protein with optimized influential parameters and yield can address the cost and production reproducibility issues. In the present study, statistical experimental design methodology was used to investigate the effect of fermentation conditions (dissolved oxygen, IPTG, and temperature) on rPDT production by Escherichia coli...
August 22, 2018: AMB Express
https://read.qxmd.com/read/29387937/a-systematic-approach-for-finding-the-objective-function-and-active-constraints-for-dynamic-flux-balance-analysis
#14
JOURNAL ARTICLE
Ali Nikdel, Richard D Braatz, Hector M Budman
Dynamic flux balance analysis (DFBA) has become an instrumental modeling tool for describing the dynamic behavior of bioprocesses. DFBA involves the maximization of a biologically meaningful objective subject to kinetic constraints on the rate of consumption/production of metabolites. In this paper, we propose a systematic data-based approach for finding both the biological objective function and a minimum set of active constraints necessary for matching the model predictions to the experimental data. The proposed algorithm accounts for the errors in the experiments and eliminates the need for ad hoc choices of objective function and constraints as done in previous studies...
May 2018: Bioprocess and Biosystems Engineering
https://read.qxmd.com/read/28714277/free-fatty-acid-receptor-3-activation-suppresses-neurogenic-motility-in-rat-proximal-colon
#15
JOURNAL ARTICLE
I Kaji, Y Akiba, T Furuyama, D W Adelson, K Iwamoto, M Watanabe, A Kuwahara, J D Kaunitz
BACKGROUND: Short-chain fatty acids (SCFA) are microbial fermentation products absorbed by the colon. We recently reported that activation of the SCFA receptor termed free fatty acid receptor 3 (FFA3), expressed on cholinergic nerves, suppresses nicotinic acetylcholine receptor (nAChR)-mediated transepithelial anion secretion. This study aimed to clarify how activation of neurally expressed FFA3 affects colonic motor function. METHODS: FFA3-expressing myenteric neurons were identified by immunostaining; contractions of isolated circular muscle strips obtained from rat proximal colon were measured by isometric transducers...
January 2018: Neurogastroenterology and Motility: the Official Journal of the European Gastrointestinal Motility Society
https://read.qxmd.com/read/26879644/monitoring-of-an-antigen-manufacturing-process
#16
JOURNAL ARTICLE
Vanessa Zavatti, Hector Budman, Raymond Legge, Melih Tamer
Fluorescence spectroscopy in combination with multivariate statistical methods was employed as a tool for monitoring the manufacturing process of pertactin (PRN), one of the virulence factors of Bordetella pertussis utilized in whopping cough vaccines. Fluorophores such as amino acids and co-enzymes were detected throughout the process. The fluorescence data collected at different stages of the fermentation and purification process were treated employing principal component analysis (PCA). Through PCA, it was feasible to identify sources of variability in PRN production...
June 2016: Bioprocess and Biosystems Engineering
https://read.qxmd.com/read/26101138/lactate-and-short-chain-fatty-acids-produced-by-microbial-fermentation-downregulate-proinflammatory-responses-in-intestinal-epithelial-cells-and-myeloid-cells
#17
JOURNAL ARTICLE
Carolina Iraporda, Agustina Errea, David E Romanin, Delphine Cayet, Elba Pereyra, Omar Pignataro, Jean Claude Sirard, Graciela L Garrote, Analía G Abraham, Martín Rumbo
The use of short chain fatty acids to modulate gastrointestinal inflammatory conditions such as ulcerative colitis has produced encouraging results either in animal models or also in clinical trials. Identifying the key cellular and molecular targets of this activity will contribute to establish the appropriate combinations/targeting strategies to maximize the efficacy of anti-inflammatory interventions. In the present work, we evaluated in vitro the interaction of lactate, acetate, propionate and butyrate on cells relevant for innate immune response of the gastrointestinal tract...
October 2015: Immunobiology
https://read.qxmd.com/read/23781630/whole-cell-pertussis-vaccine-reducing-toxicity
#18
JOURNAL ARTICLE
Thakur Datta, Devender Sharma, Inderjeet Gandhoke, Shashi Khare, Arun Bhardwaj
Since introduction of the pertussis vaccine in 1940's the morbidity and mortality due to the infection has been markedly reduced all over the world. However the adverse effects of the inactivated whole cell pertussis vaccine like pain, swelling at the site of injection, fever, vomiting anorexia, persistent crying & drowsiness have been the cause of great concern, till date. Also the safety concerns over the use of thiomersal as an inactivating agent as well preservative have been raised in the recent past...
September 2011: Journal of Communicable Diseases
https://read.qxmd.com/read/23225786/a-dynamic-metabolic-flux-balance-based-model-of-fed-batch-fermentation-of-bordetella-pertussis
#19
JOURNAL ARTICLE
Hector Budman, Nilesh Patel, Melih Tamer, Walid Al-Gherwi
A mathematical model based on a dynamic metabolic flux balance (DMFB) is developed for a process of fed-batch fermentation of Bordetella pertussis. The model is based on the maximization of growth rate at each time interval subject to stoichiometric constraints. The model is calibrated and verified with experimental data obtained in two different bioreactor experimental systems. It was found that the model calibration was mostly sensitive to the consumption or production rates of tyrosine and, for high supplementation rates, to the consumption rate of glutamate...
March 2013: Biotechnology Progress
https://read.qxmd.com/read/19671719/parapusillimonas-granuli-gen-nov-sp-nov-isolated-from-granules-from-a-wastewater-treatment-bioreactor
#20
JOURNAL ARTICLE
Yeon-Ju Kim, Myung Kyum Kim, Wan-Taek Im, Sathiyaraj Srinivasan, Deok-Chun Yang
A novel betaproteobacterium, designated strain Ch07(T), was isolated from granules from the wastewater-treatment bioreactor of an alcohol fermentation factory in South Korea. In order to determine its taxonomic position, the novel strain was characterized using a polyphasic approach. The new strain was Gram-negative, facultatively anaerobic, non-spore-forming, motile and short rod-shaped. 16S rRNA gene sequence analysis revealed that strain Ch07(T) belonged to the class Betaproteobacteria, being related to Pusillimonas noertemannii BN9(T) (gene sequence similarity 97...
June 2010: International Journal of Systematic and Evolutionary Microbiology
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