keyword
https://read.qxmd.com/read/38635902/the-transcriptome-landscape-of-developing-barley-seeds
#1
JOURNAL ARTICLE
Martin Kovacik, Anna Nowicka, Jana Zwyrtková, Beáta Strejčková, Isaia Vardanega, Eddi Esteban, Asher Pasha, Kateřina Kaduchová, Maryna Krautsova, Marie Červenková, Jan Šafář, Nicholas J Provart, Rüdiger Simon, Ales Pecinka
Cereal grains are an important source of food and feed. To provide comprehensive spatiotemporal information about biological processes in developing seeds of cultivated barley (Hordeum vulgare L. subsp. vulgare), we performed a transcriptomic study of the embryo, endosperm, and seed maternal tissues collected from grains 4-32 days after pollination. Weighted gene co-expression network and motif enrichment analyses identified specific groups of genes and transcription factors (TFs) potentially regulating barley seed tissue development...
April 18, 2024: Plant Cell
https://read.qxmd.com/read/38635353/advancing-sustainable-malting-practices-aquaporins-as-potential-breeding-targets-for-improved-water-uptake-during-controlled-germination-of-barley-hordeum-vulgare-l
#2
JOURNAL ARTICLE
Clare E O'Lone, Angéla Juhász, Mitchell Nye-Wood, David Moody, Hugh Dunn, Jean-Philippe Ral, Michelle L Colgrave
The conversion of raw barley ( Hordeum vulgare L.) to malt requires a process of controlled germination, where the grain is submerged in water to raise the moisture content to >40%. The transmembrane proteins, aquaporins, influence water uptake during the initial stage of controlled germination, yet little is known of their involvement in malting. With the current focus on sustainability, understanding the mechanisms of water uptake and usage during the initial stages of malting has become vital in improving efficient malting practices...
April 18, 2024: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/38632431/investigation-of-morpho-physiolgical-traits-and-gene-expression-in-barley-under-nitrogen-deficiency
#3
JOURNAL ARTICLE
Zohreh Hajibarat, Abbas Saidi, Habibollah Ghazvini, Zahra Hajibarat
Nitrogen (N) is an essential element for plant growth, and its deficiency influences plants at several physiological and gene expression levels. Barley (Hordeum vulgare) is one of the most important food grains from the Poaceae family and one of the most important staple food crops. However, the seed yield is limited by a number of stresses, the most important of which is the insufficient use of N. Thus, there is a need to develop N-use effective cultivars. In this study, comparative physiological and molecular analyses were performed using leaf and root tissues from 10 locally grown barley cultivars...
April 17, 2024: Scientific Reports
https://read.qxmd.com/read/38630859/a-pipeline-for-identification-of-causal-mutations-in-barley-identifies-xantha-j-as-the-chlorophyll-synthase-gene
#4
JOURNAL ARTICLE
David Stuart, Shakhira Zakhrabekova, Morten Egevang Jørgensen, Christoph Dockter, Mats Hansson
Thousands of barley (Hordeum vulgare L.) mutants have been isolated over the last century, and many are stored in gene banks across various countries. In the present work, we developed a pipeline to efficiently identify causal mutations in barley. The pipeline is also efficient for mutations located in centromeric regions. Through bulked-segregant analyses using whole genome sequencing of pooled F2 seedlings, we mapped two mutations and identified a limited number of candidate genes. We applied the pipeline on F2-mapping populations made from xan-j...
April 17, 2024: Plant Physiology
https://read.qxmd.com/read/38617318/premeiotic-24-nt-phasirnas-are-present-in-the-zea-genus-and-unique-in-biogenesis-mechanism-and-molecular-function
#5
Junpeng Zhan, Sébastien Bélanger, Scott Lewis, Chong Teng, Madison McGregor, Aleksandra Beric, Michael A Schon, Michael D Nodine, Blake C Meyers
UNLABELLED: Reproductive phasiRNAs are broadly present in angiosperms and play crucial roles in sustaining male fertility. While the premeiotic 21-nt phasiRNAs and meiotic 24-nt phasiRNA pathways have been extensively studied in maize ( Zea mays ) and rice ( Oryza sativa ), a third putative category of reproductive phasiRNAs-named premeiotic 24-nt phasiRNAs-have recently been reported in barley ( Hordeum vulgare ) and wheat ( Triticum aestivum ). To determine whether premeiotic 24-nt phasiRNAs are also present in maize and related species and begin to characterize their biogenesis and function, we performed a comparative transcriptome and degradome analysis of premeiotic and meiotic anthers from five maize inbred lines and three teosinte species/subspecies...
April 1, 2024: bioRxiv
https://read.qxmd.com/read/38615446/genome-wide-identification-of-the-cngc-gene-family-and-negative-regulation-of-drought-tolerance-by-hvcngc3-and-hvcngc16-in-transgenic-arabidopsis-thaliana
#6
JOURNAL ARTICLE
Li Zhang, Yongmei Cui, Likun An, Jie Li, Youhua Yao, Yixiong Bai, Xin Li, Xiaohua Yao, Kunlun Wu
Cyclic nucleotide-gated ion channels (CNGCs), as non-selective cation channels, play essential roles in plant growth and stress responses. However, they have not been identified in Qingke (Hordeum vulgare L.). Here, we performed a comprehensive genome-wide identification and function analysis of the HvCNGC gene family to determine its role in drought tolerance. Phylogenetic analysis showed that 27 HvCNGC genes were divided into four groups and unevenly located on seven chromosomes. Transcription analysis revealed that two closely related members of HvCNGC3 and HvCNGC16 were highly induced and the expression of both genes were distinctly different in two extremely drought-tolerant materials...
April 9, 2024: Plant Physiology and Biochemistry: PPB
https://read.qxmd.com/read/38611568/the-combination-of-low-cost-red-green-blue-rgb-image-analysis-and-machine-learning-to-screen-for-barley-plant-resistance-to-net-blotch
#7
JOURNAL ARTICLE
Fernanda Leiva, Rishap Dhakal, Kristiina Himanen, Rodomiro Ortiz, Aakash Chawade
Challenges of climate change and growth population are exacerbated by noticeable environmental changes, which can increase the range of plant diseases, for instance, net blotch (NB), a foliar disease which significantly decreases barley ( Hordeum vulgare L.) grain yield and quality. A resistant germplasm is usually identified through visual observation and the scoring of disease symptoms; however, this is subjective and time-consuming. Thus, automated, non-destructive, and low-cost disease-scoring approaches are highly relevant to barley breeding...
April 7, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38611531/elevated-ros-levels-caused-by-reductions-in-gsh-and-asa-contents-lead-to-grain-yield-reduction-in-qingke-under-continuous-cropping
#8
JOURNAL ARTICLE
Xue Gao, Jianxin Tan, Kaige Yi, Baogang Lin, Pengfei Hao, Tao Jin, Shuijin Hua
Continuous spring cropping of Qingke ( Hordeum viilgare L. var. nudum Hook. f.) results in a reduction in grain yield in the Xizang autonomous region. However, knowledge on the influence of continuous cropping on grain yield caused by reactive oxygen species (ROS)-induced stress remains scarce. A systematic comparison of the antioxidant defensive profile at seedling, tillering, jointing, flowering, and filling stages (T1 to T5) of Qingke was conducted based on a field experiment including 23-year continuous cropping (23y-CC) and control (the first year planted) treatments...
March 31, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38611480/effect-of-bio-fertilizer-application-on-agronomic-traits-yield-and-nutrient-uptake-of-barley-hordeum-vulgare-in-saline-soil
#9
JOURNAL ARTICLE
Mashael M Alotaibi, Alya Aljuaid, Ibtisam Mohammed Alsudays, Abeer S Aloufi, Aisha Nawaf AlBalawi, Abdulrahman Alasmari, Suliman Mohammed Suliman Alghanem, Bedur Faleh Albalawi, Khairiah Mubarak Alwutayd, Hany S Gharib, Mamdouh M A Awad-Allah
Under salinity conditions, growth and productivity of grain crops decrease, leading to inhibition and limited absorption of water and elements necessary for plant growth, osmotic imbalance, ionic stress, and oxidative stress. Microorganisms in bio-fertilizers have several mechanisms to provide benefits to crop plants and reduce the harmful effect of salinity. They can be effective in dissolving phosphate, fixing nitrogen, promoting plant growth, and can have a combination of all these qualities. During two successful agricultural seasons, two field experiments were conducted to evaluate the effect of bio-fertilizer applications, including phosphate solubilizing bacteria (PSB), nitrogen fixation bacteria and a mix of phosphate-solubilizing bacteria and nitrogen fixation bacteria with three rates, 50, 75 and 100% NPK, of the recommended dose of minimal fertilizer on agronomic traits, yield and nutrient uptake of barley ( Hordeum vulgare ) under saline condition in Village 13, Farafra Oasis, New Valley Governorate, Egypt...
March 25, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38606065/integrative-transcript-to-proteome-analysis-of-barley-during-ramularia-collo-cygni-leaf-spot-development-identified-several-proteins-that-are-related-to-fungal-recognition-and-infection-responses
#10
JOURNAL ARTICLE
René Lemcke, Manoj Kamble, Sebastian Schneider, Michael F Lyngkjær, Simona Radutoiu, Stefanie Wienkoop
INTRODUCTION: Ramularia leaf spot (RLS) disease is a growing threat to barley cultivation, but with no substantial resistance identified to date. Similarly, the understanding of the lifestyle of Ramularia collo-cygni ( Rcc ) and the prediction of RLS outbreak severity remain challenging, with Rcc displaying a rather untypical long endophytic phase and a sudden change to a necrotrophic lifestyle. The aim of this study was to provide further insights into the defense dynamics during the different stages of colonization and infection in barley in order to identify potential targets for resistance breeding...
2024: Frontiers in Plant Science
https://read.qxmd.com/read/38605311/exogenous-application-of-salicylic-acid-ameliorates-salinity-stress-in-barley-hordeum-vulgare-l
#11
JOURNAL ARTICLE
Shazia Hanif, Athar Mahmood, Talha Javed, Safura Bibi, Muhammad Anjum Zia, Saima Asghar, Zunaira Naeem, Sezai Ercisli, Mehdi Rahimi, Baber Ali
Barley (Hordeum vulgare L.) is a significant cereal crop belonging to Poaceae that is essential for human food and animal feeding. The production of barley grains was around 142.37 million tons in 2017/2018. However, the growth of barley was influenced by salinity which was enhanced by applying a foliar spray of salicylic acid. The current study investigated to evaluated the potential effect of SA on the barley (Hordeum vulgare L.) plants under salinity stress and its possible effects on physiological, biochemical, and growth responses...
April 11, 2024: BMC Plant Biology
https://read.qxmd.com/read/38601215/symbiotic-fungi-from-a-wild-grass-celtica-gigantea-increase-the-growth-grain-yield-and-quality-of-tritordeum-under-field-conditions
#12
JOURNAL ARTICLE
Iñigo Zabalgogeazcoa, Juan B Arellano, Elena Mellado-Ortega, Francisco Barro, Ana Martínez-Castilla, Virginia González-Blanco, Beatriz R Vázquez de Aldana
Plants function in symbiosis with numerous microorganisms, which might contribute to their adaptation and performance. In this study, we tested whether fungal strains in symbiotic interaction with roots of Celtica gigantea , a wild grass adapted to nutrient-poor soils in semiarid habitats, could improve the field performance of the agricultural cereal tritordeum ( Triticum durum  ×  Hordeum chilense ). Seedlings of tritordeum were inoculated with 12 different fungal strains isolated from roots of Celtica gigantea that were first proved to promote the growth of tritordeum plants under greenhouse conditions...
February 2024: AoB Plants
https://read.qxmd.com/read/38592924/re-evaluation-of-vascular-histogenesis-in-the-root-tips-of-selected-species-in-the-poaceae-using-new-methods-analysis-of-the-plerome-vascular-initials-pericycle-and-late-maturing-metaxylem-vessels
#13
JOURNAL ARTICLE
Yasushi Miki, Susumu Saito, Teruo Niki, Daniel K Gladish
Serial sectioning and 3D image reconstruction methods were applied to elucidate the structures of the apices of root vascular cylinders (VCs) in taxa of the Poaceae: Zea mays "Honey Bantam", Z. mays ssp. mexicana , Hordeum vulgare and Oryza sativa . The primary and nodal roots were investigated. Observations were performed using high-quality sectioning and 3D image-processing techniques improved and developed by the authors. We found that a quiescent uniseriate plerome was located at the most distal part of each VC...
March 21, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38592826/bringing-barley-back-analysis-of-heritage-varieties-for-use-as-germplasm-sources-to-improve-resistance-against-the-most-devastating-contemporary-disease-in-canada-fusarium-head-blight-fusarium-graminearum
#14
JOURNAL ARTICLE
James R Tucker, Ana Badea, Barbara A Blackwell, Dan MacEachern, Aaron Mills
Fusarium head blight (FHB), caused by Fusarium graminearum , is currently the most devastating disease for barley ( Hordeum vulgare ) in Canada. Associated mycotoxins can compromise grain quality, where deoxynivalenol (DON) is considered particularly damaging due to its frequency of detection. Breeding barley with a lower DON content is difficult, due to the poor adaptation and malt quality of resistance sources. A set of European-derived heritage varieties were screened in an FHB nursery in Charlottetown, PE, with selections tested at Brandon, MB, between 2018-2022...
March 11, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38579153/indian-gooseberry-and-barley-sprout-complex-prevent-oxidative-stress-and-photoaging-of-the-skin-in-ultraviolet-b-irradiated-shk-i-mice
#15
JOURNAL ARTICLE
Minhee Lee, Dakyung Kim, Mi-Ryeong Park, Soyoung Kim, Jong-Lae Kim, Jong Wook Lee, Jinseong Yang, Ok-Kyung Kim, Jeongmin Lee
This study investigated the protective effects of a complex of Indian gooseberry and barley sprout (IB complex) on oxidative stress and skin damage caused by ultraviolet B irradiation in SHK-I hairless mice. The study examined the impact of IB complex on skin hydration, wrinkle formation, and melanogenesis using enzyme-linked immunosorbent assay, real-time polymerase chain reaction, and western blot analysis. The IB complex reduced skin hydration loss and wrinkle formation, while also demonstrating enhanced antioxidant activities...
April 5, 2024: Journal of Medicinal Food
https://read.qxmd.com/read/38577688/transcriptome-analysis-of-bipolaris-sorokiniana-hordeum-vulgare-provides-insights-into-mechanisms-of-host-pathogen-interaction
#16
JOURNAL ARTICLE
Poulami Basak, Malkhan Singh Gurjar, Tej Pratap Jitendra Kumar, Natasha Kashyap, Dinesh Singh, Shailendra Kumar Jha, Mahender Singh Saharan
Spot blotch disease incited by Bipolaris sorokiniana severely affects the cultivation of barley. The resistance to B . sorokiniana is quantitative in nature and its interaction with the host is highly complex which necessitates in-depth molecular analysis. Thus, the study aimed to conduct the transcriptome analysis to decipher the mechanisms and pathways involved in interactions between barley and B . sorokiniana in both the resistant (EC0328964) and susceptible (EC0578292) genotypes using the RNA Seq approach...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38569966/linking-the-humification-of-organic-amendments-with-size-aggregate-distribution-insights-into-molecular-composition-using-ft-icr-ms
#17
JOURNAL ARTICLE
Ho Gyeong Chae, Andrew J Margenot, Jong-Rok Jeon, Min Sung Kim, Kyoung-Soon Jang, Ho Young Yoon, Pil Joo Kim, Jeonggu Lee
Soil organic matter (SOM) plays a pivotal role in enhancing physical and biological characteristics of soil. Humic substances constitute a substantial proportion of SOM and their increase can improve crop yields and promote agricultural sustainability. While previous research has primarily assessed the influence that humic acids (HAs) derived from natural water have on soil structure, our study focuses on the impact of HAs on soil aggregation under different fertilizer regimes. During the summer cropping season, maize was cultivated under organic and synthetic fertilizer treatments...
April 1, 2024: Science of the Total Environment
https://read.qxmd.com/read/38561660/acyl-coa-binding-protein-acbp-genes-involvement-in-response-to-abiotic-stress-and-exogenous-hormone-application-in-barley-hordeum-vulgare-l
#18
JOURNAL ARTICLE
Huayu Chang, Minhu Ma, Mingzhou Gu, Shanshan Li, Mengrun Li, Ganggang Guo, Guofang Xing
BACKGROUND: Acyl-CoA-Binding proteins (ACBPs) function as coenzyme A transporters and play important roles in regulating plant growth and development in response to abiotic stress and phytohormones, as well as in membrane repair. To date, the ACBP family has not been a comprehensively characterized in barley (Hordeum vulgare L.). RESULTS: Eight ACBP genes were identified in the barley genome and named as HvACBP1-8. The analysis of the proteins structure and promoter elements of HvACBP suggested its potential functions in plant growth, development, and stress response...
April 2, 2024: BMC Plant Biology
https://read.qxmd.com/read/38560273/effects-of-different-nitrogen-fertilization-systems-on-crop-yield-and-nitrogen-use-efficiency-results-of-a-field-experiment-in-southern-germany
#19
JOURNAL ARTICLE
Martin Mittermayer, Joseph Donauer, Stefan Kimmelmann, Franz-Xaver Maidl, Kurt-Jürgen Hülsbergen
The effects of the German Fertilizer Application Ordinance (GFO) on crop yield, nitrogen use efficiency and economical performance are highly controversial in science and practice in Germany. This study presents the results of a multi-year field experiment conducted at an experimental farm in southern Germany, in which the effects of different fertilizer systems on crop yield, protein concentration and nitrogen balance were analyzed. At this study site, relatively low N mineralization from the soil N pool was detected...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38554056/characterization-and-correlation-of-the-probing-behaviors-of-macrosteles-quadrilineatus-hemiptera-cicadellidae-with-electropenetrography-epg-waveforms
#20
JOURNAL ARTICLE
Berenice Romero, Joanna Rojek, Tyler Wist, Sean M Prager
Aster leafhopper (Hemiptera: Cicadellidae: Macrosteles quadrilineatus Forbes) is a polyphagous insect species that migrates into the upper Midwest of the United States and the Western Canadian Prairies. Populations of this insect are associated with the transmission of a plant pathogen (Candidatus Phytoplasma asteris, 16SrI) to several annual crops and perennial plant species. Previous studies suggest that aster leafhoppers can sometimes prefer less suitable hosts for their development and survival, yet it is unclear if this lower performance on certain plant species is associated with reduced or impaired probing behaviors due to characteristics of the plants...
March 1, 2024: Journal of Insect Science
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