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Photosynthesis

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https://www.readbyqxmd.com/read/28453883/stomatal-function-density-and-pattern-and-co2-assimilation-in-arabidopsis-thaliana-tmm1-and-sdd1-1-mutants
#1
Martina Vráblová, Daniel Vrábl, Marie Hronková, Jiří Kubásek, Jiří Šantrůček
Stomata modulate the exchange of water and CO2 between plant and atmosphere. Although stomatal density is known to affect CO2 diffusion into the leaf and thus photosynthetic rate, the effect of stomatal density and patterning on CO2 assimilation is not fully understood. We used wild-types Col-0 and C24 and stomatal mutants sdd1-1 and tmm1 of Arabidopsis thaliana, differing in stomatal density and pattern, to study the effects of these variations on both stomatal and mesophyll conductance and CO2 assimilation rate...
April 28, 2017: Plant Biology
https://www.readbyqxmd.com/read/28453685/phenocurve-capturing-dynamic-phenotype-environment-relationships-using-phenomics-data
#2
Yifan Yang, Lei Xu, Zheyun Feng, Jeffrey A Cruz, Linda J Savage, David M Kramer, Jin Chen
Motivation: Phenomics is essential for understanding the mechanisms that regulate or influence growth, fitness, and development. Techniques have been developed to conduct high-throughput large-scale phenotyping on animals, plants and humans, aiming to bridge the gap between genomics, gene functions and traits. Although new developments in phenotyping techniques are exciting, we are limited by the tools to analyze fully the massive phenotype data, especially the dynamic relationships between phenotypes and environments...
May 1, 2017: Bioinformatics
https://www.readbyqxmd.com/read/28453647/photosynthetic-acclimation-to-warming-in-tropical-forest-tree-seedlings
#3
Martijn Slot, Klaus Winter
Tropical forests have a mitigating effect on man-made climate change by acting as a carbon sink. For that effect to continue, tropical trees will have to acclimate to rising temperatures, but it is currently unknown whether they have this capacity. We grew seedlings of three tropical tree species over a range of temperature regimes (TGrowth = 25, 30, 35 °C) and measured the temperature response of photosynthetic CO2 uptake. All species showed signs of acclimation: the temperature-response curves shifted, such that the temperature at which photosynthesis peaked (TOpt) increased with increasing TGrowth...
April 27, 2017: Journal of Experimental Botany
https://www.readbyqxmd.com/read/28449359/transcriptomic-responses-of-solanum-dulcamara-to-natural-and-simulated-herbivory
#4
Tobias Lortzing, Vivien Firtzlaff, Duy Nguyen, Ivo Rieu, Sandra Stelzer, Martina Schad, Jim Kallarackal, Anke Steppuhn
Plants are attacked by diverse herbivores and respond with manifold defense responses. To study transcriptional and other early regulation events of these plant responses, herbivory is often simulated to standardize the temporal and spatial dynamics that vary tremendously for natural herbivory. Yet to what extent such simulations of herbivory are able to elicit the same plant response as real herbivory remains largely undetermined. We examined the transcriptional response of a wild model plant to herbivory by lepidopteran larvae and to a commonly used herbivory simulation by applying the larvae's oral secretions to standardized wounds...
April 27, 2017: Molecular Ecology Resources
https://www.readbyqxmd.com/read/28449261/exploring-uncertainty-of-amazon-dieback-in-a-perturbed-parameter-earth-system-ensemble
#5
Chris A Boulton, Ben B B Booth, Peter Good
The future of the Amazon rainforest is unknown due to uncertainties in projected climate change and the response of the forest to this change (forest resiliency). Here we explore the effect of some uncertainties in climate and land surface processes on the future of the forest, using a perturbed physics ensemble of HadCM3C. This is the first time Amazon forest changes are presented using an ensemble exploring both land vegetation processes and physical climate feedbacks in a fully coupled modelling framework...
April 27, 2017: Global Change Biology
https://www.readbyqxmd.com/read/28449129/phenotypic-differences-determine-drought-stress-responses-in-ecotypes-of-arundo-donax-adapted-to-different-environments
#6
Mastaneh Ahrar, Dilyana Doneva, Massimiliano Tattini, Cecilia Brunetti, Antonella Gori, Mirco Rodeghiero, Georg Wohlfahrt, Franco Biasioli, Claudio Varotto, Francesco Loreto, Violeta Velikova
Arundo donax has been identified as an important biomass and biofuel crop. Yet, there has been little research on photosynthetic and metabolic traits, which sustain the high productivity of A. donax under drought conditions. This study determined phenotypic differences between two A. donax ecotypes coming from stands with contrasting adaptation to dry climate. We hypothesized that the Bulgarian (BG) ecotype, adapted to drier conditions, exhibits greater drought tolerance than the Italian (IT) ecotype, adapted to a more mesic environment...
April 25, 2017: Journal of Experimental Botany
https://www.readbyqxmd.com/read/28447615/millions-of-boreal-shield-lakes-can-be-used-to-probe-archaean-ocean-biogeochemistry
#7
S L Schiff, J M Tsuji, L Wu, J J Venkiteswaran, L A Molot, R J Elgood, M J Paterson, J D Neufeld
Life originated in Archaean oceans, almost 4 billion years ago, in the absence of oxygen and the presence of high dissolved iron concentrations. Early Earth oxidation is marked globally by extensive banded iron formations but the contributing processes and timing remain controversial. Very few aquatic habitats have been discovered that match key physico-chemical parameters of the early Archaean Ocean. All previous whole ecosystem Archaean analogue studies have been confined to rare, low sulfur, and permanently stratified lakes...
April 27, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28446919/high-nitrogen-supply-induces-physiological-responsiveness-to-long-photoperiod-in-barley
#8
Jian Zeng, Huajin Sheng, Yang Liu, Yao Wang, Yi Wang, Houyang Kang, Xing Fan, Lina Sha, Shu Yuan, Yonghong Zhou
Photoperiod and nutrient nitrogen (N) supply influence the growth, development, and productivity of crops. This study examined the physiological, biochemical, and morpho-anatomical traits of NA5 and NA9, two barley cultivars with contrasting photoperiod lengths, under the combined treatment of photoperiod regime and N supply. Under long photoperiod, high N supply decreased net photosynthesis; decreased chlorophyll a and chlorophyll a/b; decreased ascorbate peroxidase (APX), catalase (CAT), and superoxide dismutase (SOD) activities; decreased ascorbate, glutathione, soluble protein, and soluble sugar; destroyed mesophyll cell integrity; and increased [Formula: see text], malondialdehyde, and proline in both NA5 and NA9...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28446759/transcriptomic-response-of-durum-wheat-to-nitrogen-starvation
#9
Pasquale L Curci, Riccardo Aiese Cigliano, Diana L Zuluaga, Michela Janni, Walter Sanseverino, Gabriella Sonnante
Nitrogen (N) is a key macronutrient representing a limiting factor for plant growth and development and affects productivity in wheat. In this study, durum wheat response to N chronic starvation during grain filling was investigated through a transcriptomic approach in roots, leaves/stems, flag leaf and spikes of cv. Svevo. Nitrogen stress negatively influenced plant height, tillering, flag leaf area, spike and seed traits, and total N content. RNA-seq data revealed 4,626 differentially expressed genes (DEGs)...
April 26, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28445789/characterisation-of-pb-induced-changes-and-prediction-of-pb-exposure-in-microalgae-using-infrared-spectroscopy
#10
Ly Dao, John Beardall, Philip Heraud
Macromolecular changes in Chlorella sp. FleB1 and Scenedesmus acutus YaA6 exposed to Pb were characterised by Attenuated Total Reflectance-Fourier Transform Infrared (ATR-FTIR) spectroscopy. Spectra were collected in the mid-infrared spectral region and a chemometric approach was used to analyse the spectra. Principal Component Analysis showed that under Pb treatment, carbohydrates and lipids increased while proteins and phosphorylated molecules decreased in both the isolates. These conclusions were corroborated by conventional measurements of photosynthesis and neutral lipids...
April 14, 2017: Aquatic Toxicology
https://www.readbyqxmd.com/read/28445484/transcriptome-analysis-of-creeping-bentgrass-exposed-to-drought-stress-and-polyamine-treatment
#11
Yingmei Ma, Vijaya Shukla, Emily B Merewitz
Creeping bentgrass is an important cool-season turfgrass species sensitive to drought. Treatment with polyamines (PAs) has been shown to improve drought tolerance; however, the mechanism is not yet fully understood. Therefore, this study aimed to evaluate transcriptome changes of creeping bentgrass in response to drought and exogenous spermidine (Spd) application using RNA sequencing (RNA-Seq). The high-quality sequences were assembled and 18,682 out of 49,190 (38%) were detected as coding sequences. A total of 22% and 19% of genes were found to be either up- or down-regulated due to drought while 20% and 34% genes were either up- or down- regulated in response to Spd application under drought conditions, respectively...
2017: PloS One
https://www.readbyqxmd.com/read/28444904/a-bell-pepper-cultivar-tolerant-to-chilling-enhanced-nitrogen-allocation-and-stress-related-metabolite-accumulation-in-the-roots-in-response-to-low-root-zone-temperature
#12
Moses Kwame Aidoo, Tal Sherman, Naftali Lazarovitch, Aaron Fait, Shimon Rachmilevitch
Two bell pepper (Capsicum annuum) cultivars, differing in their response to chilling, were exposed to three levels of root zone temperatures. Gas exchange, shoot and root phenology, and the pattern of change of the central metabolites and secondary metabolites caffeate and benzoate in the leaves and roots were profiled. Low root zone temperature significantly inhibited gaseous exchange, with a greater effect on the sensitive commercial pepper hybrid (Canon) than on the new hybrid bred to enhance abiotic stress tolerant (S103)...
April 26, 2017: Physiologia Plantarum
https://www.readbyqxmd.com/read/28444369/three-dimensional-intracellular-structure-of-a-whole-rice-mesophyll-cell-observed-with-fib-sem
#13
Takao Oi, Sakiko Enomoto, Tomoyo Nakao, Shigeo Arai, Koji Yamane, Mitsutaka Taniguchi
Background and Aims: Ultrathin sections of rice leaf blades observed two-dimensionally using a transmission electron microscope (TEM) show that the chlorenchyma is composed of lobed mesophyll cells, with intricate cell boundaries, and lined with chloroplasts. The lobed cell shape and chloroplast positioning are believed to enhance the area available for the gas exchange surface for photosynthesis in rice leaves. However, a cell image revealing the three-dimensional (3-D) ultrastructure of rice mesophyll cells has not been visualized...
April 21, 2017: Annals of Botany
https://www.readbyqxmd.com/read/28443722/reflections-on-o2-as-a-biosignature-in-exoplanetary-atmospheres
#14
Victoria S Meadows
Oxygenic photosynthesis is Earth's dominant metabolism, having evolved to harvest the largest expected energy source at the surface of most terrestrial habitable zone planets. Using CO2 and H2O-molecules that are expected to be abundant and widespread on habitable terrestrial planets-oxygenic photosynthesis is plausible as a significant planetary process with a global impact. Photosynthetic O2 has long been considered particularly robust as a sign of life on a habitable exoplanet, due to the lack of known "false positives"-geological or photochemical processes that could also produce large quantities of stable O2...
April 26, 2017: Astrobiology
https://www.readbyqxmd.com/read/28443322/crassulacean-acid-metabolism-as-a-continuous-trait-variability-in-the-contribution-of-crassulacean-acid-metabolism-cam-in-populations-of-portulacaria-afra
#15
Lonnie J Guralnick, Kate Gladsky
Portulacaria afra L. is a dominant facultative CAM species growing in the Southeastern Cape of South Africa. P. afra is well adapted to regions of the Spekboom thicket in areas of limited and sporadic rainfall. P. afra populations occur in isolated drainages. We hypothesized the utilization of CAM would vary in the different populations in response to rainfall and temperature gradients. Carbon isotope composition can be used to determine the contribution of CAM in leaf tissue. P. afra leaves of populations were analyzed in transects running south to north and east to west in locations from the coast to elevations of 1400 m...
April 2017: Heliyon
https://www.readbyqxmd.com/read/28443288/rubisco-activases-aaa-chaperones-adapted-to-enzyme-repair
#16
REVIEW
Javaid Y Bhat, Gabriel Thieulin-Pardo, F Ulrich Hartl, Manajit Hayer-Hartl
Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco), the key enzyme of the Calvin-Benson-Bassham cycle of photosynthesis, requires conformational repair by Rubisco activase for efficient function. Rubisco mediates the fixation of atmospheric CO2 by catalyzing the carboxylation of the five-carbon sugar ribulose-1,5-bisphosphate (RuBP). It is a remarkably inefficient enzyme, and efforts to increase crop yields by bioengineering Rubisco remain unsuccessful. This is due in part to the complex cellular machinery required for Rubisco biogenesis and metabolic maintenance...
2017: Frontiers in Molecular Biosciences
https://www.readbyqxmd.com/read/28443122/membrane-proteomics-of-arabidopsis-glucosinolate-mutants-cyp79b2-b3-and-myb28-29
#17
Islam Mostafa, Mi-Jeong Yoo, Ning Zhu, Sisi Geng, Craig Dufresne, Maged Abou-Hashem, Maher El-Domiaty, Sixue Chen
Glucosinolates (Gls) constitute a major group of natural metabolites represented by three major classes (aliphatic, indolic and aromatic) of more than 120 chemical structures. In our previous work, soluble proteins and metabolites in Arabidopsis mutants deficient of aliphatic (myb28/29) and indolic Gls (cyp79B2B3) were analyzed. Here we focus on investigating the changes at the level of membrane proteins in these mutants. Our LC/MS-MS analyses of tandem mass tag (TMT) labeled peptides derived from the cyp79B2/B3 and myb28/29 relative to wild type resulted in the identification of 4,673 proteins, from which 2,171 are membrane proteins...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28443111/subcellular-compartmentalization-and-chemical-forms-of-lead-participate-in-lead-tolerance-of-robinia-pseudoacacia-l-with-funneliformis-mosseae
#18
Li Huang, Haoqiang Zhang, Yingying Song, Yurong Yang, Hui Chen, Ming Tang
The effect of arbuscular mycorrhizal fungus on the subcellular compartmentalization and chemical forms of lead (Pb) in Pb tolerance plants was assessed in a pot experiment in greenhouse conditions. We measured root colonization, plant growth, photosynthesis, subcellular compartmentalization and chemical forms of Pb in black locust (Robinia pseudoacacia L.) seedlings inoculated with Funneliformis mosseae isolate (BGC XJ01A) under a range of Pb treatments (0, 90, 900, and 3000 mg Pb kg(-1) soil). The majority of Pb was retained in the roots of R...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28441523/carbohydrates-and-gibberellins-relationship-in-potato-tuberization
#19
Hana Ševčíková, Petra Mašková, Danuše Tarkowská, Tomáš Mašek, Helena Lipavská
Potato represents the third most important crop worldwide and therefore to understand regulations of tuber onset is crucial from both theoretical and practical points of view. Photosynthesis and related carbohydrate status along with phytohormone balance belong to the essential factors in regulation of plant development including storage organ formation. In our work we used potato (Solanum tuberosum) cv. Lada and its spontaneously tuberizing mutant (ST plants) grown in vitro under low carbohydrate availability (non-inductive conditions)...
April 8, 2017: Journal of Plant Physiology
https://www.readbyqxmd.com/read/28440582/phytochrome-interacting-factors-mediate-metabolic-control-of-the-circadian-system-in-arabidopsis
#20
Ekaterina Shor, Inyup Paik, Shlomit Kangisser, Rachel Green, Enamul Huq
The circadian (c. 24 h) system has a central role in regulating the timing and coordination of photosynthesis, and in turn photosynthesis and photosynthetic products which are controlled by the circadian clock feedback to affect the circadian oscillator that generates rhythms. However, little is known about the mechanism(s) by which this feedback occurs. One group of likely candidates for signal transduction to the circadian clock are the PHYTOCHROME INTERACTING FACTOR (PIF) family of transcription factors which have been shown to be involved in numerous signaling pathways in Arabidopsis...
April 25, 2017: New Phytologist
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