keyword
https://read.qxmd.com/read/38632980/noninvasive-prenatal-diagnosis-of-sea-thalassemia-by-combining-1000-genomes-database-and-relative-haplotype-dosage
#1
JOURNAL ARTICLE
Dewen Liu, Xuejuan Nong, Fengming Lai, Chen Nong, Taizhong Wang, Yulian Tang
To explore a noninvasive method for diagnosis of SEA-thalassemia and to investigate whether the regional factors affect the accuracy of this method. The method involved using a public database and bioinformatics software to construct parental haplotypes for proband and predicting fetal genotypes using relative haplotype dosage. We screened and downloaded sequencing data of couples who were both SEA-thalassemia carriers from the China National Genebank public data platform, and matched the sequencing data format with that of the reference panel using Ubuntu system tools...
April 18, 2024: Hemoglobin
https://read.qxmd.com/read/38622635/numbers-of-prenatal-cell-free-dna-screens-performed-results-of-a-2022-cap-exercise
#2
JOURNAL ARTICLE
Glenn E Palomaki, Philip Wyatt, Ross Rowsey, Phillip Michael Cacheris, Nathalie Lepage, Marvin R Natowicz, Thomas Long, Ann M Moyer
OBJECTIVE: Determine current analytical methods and number of cell-free (cf) DNA prenatal screening tests performed for common trisomies. METHODS: The College of American Pathologists 2022-B Noninvasive Prenatal Testing exercise was distributed in December 2022 to 93 participants in 22 countries. Supplemental questions included the number of tests performed in a recent month and the proportion of samples originating outside the United States (US). RESULTS: Eighty-three participants from three continents returned results; 74 (89%) were suitable for the analyses...
April 15, 2024: Prenatal Diagnosis
https://read.qxmd.com/read/38592422/expanding-access-to-noninvasive-prenatal-diagnosis-for-monogenic-conditions-to-consanguineous-families
#3
JOURNAL ARTICLE
Britt Hanson, Joe Shaw, Nikita Povarnitsyn, Benjamin Bowns, Elizabeth Young, Amy Gerrish, Stephanie Allen, Elizabeth Scotchman, Lyn S Chitty, Natalie J Chandler
BACKGROUND: Cell-free fetal DNA exists within the maternal bloodstream during pregnancy and provides a means for noninvasive prenatal diagnosis (NIPD). Our accredited clinical service offers definitive NIPD for several autosomal recessive (AR) and X-linked conditions using relative haplotype dosage analysis (RHDO). RHDO involves next-generation sequencing (NGS) of thousands of common single nucleotide polymorphism (SNPs) surrounding the gene of interest in the parents and an affected or unaffected offspring to conduct haplotype phasing of the high- and low-risk alleles...
April 9, 2024: Clinical Chemistry
https://read.qxmd.com/read/38592369/use-of-type-5-single-nucleotide-polymorphisms-allows-noninvasive-prenatal-diagnosis-for-consanguineous-families
#4
JOURNAL ARTICLE
Erik A Sistermans
No abstract text is available yet for this article.
April 9, 2024: Clinical Chemistry
https://read.qxmd.com/read/38552051/a-rapid-pcr-free-next-generation-sequencing-method-for-comprehensive-diagnosis-of-chromosome-disease-syndromes-in-prenatal-samples
#5
JOURNAL ARTICLE
Hong Su, Shengni Liu, Hongxia Xu, Cuihua Shen, Min Xu, Jing Zhang, Dongyun Li
The aim of this study is to investigate the application performance of rapid copy number variation sequencing (rCNV-seq) technology for the detection of chromosomal abnormalities during prenatal diagnosis. Samples were collected from 424 pregnant women who were at high-risk for noninvasive prenatal screening in Kunming Maternal and Child Care Hospital from January 2018 to May 2022. rCNV-seq technique was used to detect fetal chromosome abnormalities and compare the results with that of chromosomal karyotype analysis...
March 29, 2024: Medicine (Baltimore)
https://read.qxmd.com/read/38526221/performance-of-noninvasive-prenatal-screening-for-fetal-sex-chromosome-aneuploidies-in-a-cohort-of-116-862-pregnancies
#6
JOURNAL ARTICLE
Yanfei Xu, Jianbo Lou, Yeqing Qian, Pengzhen Jin, Yangwen Qian, Jiawei Hong, Yuqing Xu, Yixuan Yin, Songjia Yi, Minyue Dong
BACKGROUND: Noninvasive prenatal screening (NIPS) has shown good performance in screening common aneuploidies. However, its performance in detecting fetal sex chromosome aneuploidies (SCAs) needs to be evaluated in a large cohort. RESEARCH DESIGN AND METHODS: In this retrospective observation, a total of 116,862 women underwent NIPS based on DNA nanoball sequencing from 2015 to 2022. SCAs were diagnosed based on karyotyping or chromosomal microarray analysis (CMA)...
March 25, 2024: Expert Review of Molecular Diagnostics
https://read.qxmd.com/read/38486373/accuracy-of-mri-based-radiomics-in-diagnosis-of-placenta-accreta-spectrum-a-prisma-systematic-review-and-meta-analysis
#7
JOURNAL ARTICLE
Liqiong Huang, Lin Ma, Qin Zhou, Yi Hu, Lirong Hu, Yang Luo, Yan Li
BACKGROUND Placenta accreta syndrome (PAS) can lead to severe obstetric bleeding, and can be life-threatening. This study aimed to assess the precision of radiomics features derived from magnetic resonance imaging (MRI) for diagnosing PAS. MATERIAL AND METHODS A comprehensive search was conducted in the databases PubMed, Embase, Web of Science, and the Cochrane library from inception to October 2023. We included diagnostic accuracy studies utilizing radiomics-MRI in PAS patients, with histopathology serving as the reference standard...
March 15, 2024: Medical Science Monitor: International Medical Journal of Experimental and Clinical Research
https://read.qxmd.com/read/38459741/caution-with-noninvasive-prenatal-screening-for-single-gene-disorders-a-case-report-of-a-col1a1-variant-in-osteogenesis-imperfecta
#8
JOURNAL ARTICLE
Olivia B Chafitz, Nicole S Feigenblum, Andrew S Haddad, Yaakov E Abdelhak, Antonia F Oladipo
No abstract text is available yet for this article.
March 8, 2024: Prenatal Diagnosis
https://read.qxmd.com/read/38457559/chromosome-balanced-translocation-in-newborn-fetus-founded-during-prenatal-diagnosis-three-cases-reports
#9
JOURNAL ARTICLE
Lan Yao, Xun Kan, Yuxin Xia, Luyao Wang, Xueyu Zhao, Yingli Lu
RATIONALE: Because of the normal phenotype, carriers of specific chromosomal translocations are often diagnosed only after their development of associated malignancies, recurrent miscarriages, and reproductive difficulties. In this paper, we report primary balanced fetal chromosomal translocations by performing the necessary invasive prenatal diagnosis in couples with previous malformations coupled with prenatal testing suggesting a high risk for trisomy 21. PATIENT CONCERNS: Case 1 and Case 2 couples had malformed children, and Case 3 couples had a high risk of trisomy 21 on noninvasive preconception serological testing...
March 8, 2024: Medicine (Baltimore)
https://read.qxmd.com/read/38411249/noninvasive-single-cell-based-prenatal-genetic-testing-a%C3%A2-proof-of-concept-clinical-study
#10
JOURNAL ARTICLE
Michelle Bellair, Elisabete Amaral, Mason Ouren, Cameron Roark, Jaeweon Kim, April O'Connor, Adrianna Soriano, Margaret L Schindler, Ronald J Wapner, Joanne L Stone, Nicola Tavella, Audrey Merriam, Lauren Perley, Amy M Breman, Arthur L Beaudet
OBJECTIVE: To clinically assess a cell-based noninvasive prenatal genetic test using sequence-based copy number analysis of single trophoblasts from maternal blood. METHODS: Blood was obtained from 401 (243 + 158) individuals (8-22 weeks) and shipped overnight. Red cells were lysed, and nucleated cells stained for cytokeratin (CK) and CD45 and enriched for positive CK staining. Automated scanning was used to identify and pick single CK+ /CD45- trophoblasts which were subjected to next-generation sequencing...
February 27, 2024: Prenatal Diagnosis
https://read.qxmd.com/read/38409146/the-evaluation-of-invasive-prenatal-diagnostic-tests-in-north-cyprus-a-retrospective-study
#11
JOURNAL ARTICLE
M Z Avci, A Arkut, N Bilgic, H Sutcu
BACKGROUND: Congenital diseases are still an important medical, social, and economic problem all over the world. In North Cyprus, in addition to other reasons, early prenatal diagnostic measures are undertaken to prevent births with thalassemia major, a locally widespread genetic disease. AIM: This study aims to evaluate the results of prenatal invasive diagnostic tests performed in a private obstetrics clinic in Northern Cyprus and show the diagnosis process of thalassemia and chromosomal anomalies...
February 1, 2024: Nigerian Journal of Clinical Practice
https://read.qxmd.com/read/38383389/prenatal-detection-and-molecular-cytogenetic-characterization-of-xp-deletion-and-xq-duplication-a-case-report-and-literature-review
#12
JOURNAL ARTICLE
Qing Lin, Chunya Liang, Bole Du, Lijiao Li, Hong Li, Xiaolan Mai, Sheng Li, Wenyu Xu, Cunzhen Wu, Mi Zeng
BACKGROUND: Copy number variation (CNV) of X chromosome can lead to a variety of neonatal abnormalities, especially for male fetuses. In recent years, due to the high sensitivity and high specificity of NIPS, its application has gradually expanded from chromosome aneuploidy to CNV. Few prenatal cases involving the detection of Xq duplication and deletion by NIPS have been reported, but it is of great significance for genetic counseling. CASE PRESENTATION: A 36-year-old woman was referred for prenatal diagnosis and genetic counseling at 17 weeks of gestation because of abnormal result of noninvasive prenatal screening (NIPS)...
February 21, 2024: BMC Medical Genomics
https://read.qxmd.com/read/38336695/identification-of-copy-number-variations-among-fetuses-with-isolated-ultrasound-soft-markers-in-pregnant-women-not-of-advanced-maternal-age
#13
JOURNAL ARTICLE
Yunyun Liu, Sha Liu, Jianlong Liu, Ting Bai, Xiaosha Jing, Cechuan Deng, Tianyu Xia, Jing Cheng, Lingling Xing, Xiang Wei, Yuan Luo, Quanfang Zhou, Dan Xie, Yueyue Xiong, Ling Liu, Qian Zhu, Hongqian Liu
BACKGROUND: Pathogenic (P) copy number variants (CNVs) may be associated with second-trimester ultrasound soft markers (USMs), and noninvasive prenatal screening (NIPS) can enable interrogate the entire fetal genome to screening of fetal CNVs. This study evaluated the clinical application of NIPS for detecting CNVs among fetuses with USMs in pregnant women not of advanced maternal age (AMA). RESULTS: Fetal aneuploidies and CNVs were identified in 6647 pregnant women using the Berry Genomics NIPS algorithm...
February 10, 2024: Orphanet Journal of Rare Diseases
https://read.qxmd.com/read/38329169/first-trimester-noninvasive-prenatal-diagnosis-of-seven-facioscapulohumeral-muscular-dystrophy-type-1-families-using-snp-based-amplicon-sequencing-an-earlier-rapid-and-safer-way
#14
JOURNAL ARTICLE
Xinyu Fu, Zhenhua Zhao, Lingrong Kong, Shaojun Li, Feifei Li, Xiujuan Han, Luming Sun, Di Wu, Yanan Wang, Xiangdong Kong
The study is to explore the feasibility and value of SNP-based noninvasive prenatal diagnosis (NIPD) for facioscapulohumeral muscular dystrophy type 1 (FSHD1) in early pregnancy weeks. We prospectively collected seven FSHD1 families, with an average gestational age of 8+6 . Among these seven couples, there were three affected FSHD1 mothers and four affected fathers. A multiplex-PCR panel comprising 402 amplicons was designed to selective enrich for highly heterozygous SNPs upstream of the DUX4 gene. Risk haplotype was constructed based on familial linkage analysis...
February 8, 2024: American Journal of Medical Genetics. Part A
https://read.qxmd.com/read/38297236/clinical-evaluation-of-noninvasive-prenatal-testing-for-sex-chromosome-aneuploidies-in-9-176-korean-pregnant-women-a-single-center-retrospective-study
#15
JOURNAL ARTICLE
Hyunjin Kim, Ji Eun Park, Kyung Min Kang, Hee Yeon Jang, Minyeon Go, So Hyun Yang, Jong Chul Kim, Seo Young Lim, Dong Hyun Cha, Jungah Choi, Sung Han Shim
BACKGROUND: To evaluate the clinical significance of noninvasive prenatal testing (NIPT) for detecting fetal sex chromosome aneuploidies (SCAs) in Korean pregnant women. METHODS: We retrospectively analyzed NIPT data from 9,176 women with singleton pregnancies referred to the CHA Biotech genome diagnostics center. Cell-free fetal DNA (cffDNA) was extracted from maternal peripheral blood, and high-throughput massively parallel sequencing was conducted. Subsequently, the positive NIPT results for SCA were validated via karyotype and chromosomal microarray analyses...
January 31, 2024: BMC Pregnancy and Childbirth
https://read.qxmd.com/read/38293423/the-detection-efficacy-of-noninvasive-prenatal-genetic-testing-nipt-for-sex-chromosome-abnormalities-and-copy-number-variation-and-its-differentiation-in-pregnant-women-of-different-ages
#16
JOURNAL ARTICLE
Yimei Li, Xiaofeng Yang, Ying Zhang, Huan Lou, Mingli Wu, Fang Liu, Wenjing Chang, Xueling Zhao
OBJECTIVE: To analyze the efficacy of noninvasive prenatal genetic testing (NIPT) in detecting fetal sex chromosome abnormalities and copy number variation (CNV), compare the efficacy between NIPT and serological screening alone, and further analyze the fetal sex chromosome abnormalities and CNV differentiation in pregnant women of different ages, so as to provide a reference for the prevention and control of fetal birth defects. METHODS: Clinical data from 22,692 pregnant women admitted to our hospital from January 2013 to December 2022 were retrospectively analyzed...
January 30, 2024: Heliyon
https://read.qxmd.com/read/38285369/cell-free-dna-and-next-generation-sequencing-for-prenatal-diagnosis
#17
JOURNAL ARTICLE
Klaus Rieneck
Deep sequencing by NGS of targeted amplicons can identify rare genetic variants in a pool of DNA where the vast majority of genomic DNA does not contain the variant. This approach can be used to detect a previously described paternally inherited, fetal variant in cell-free DNA (cfDNA) in maternal plasma. This is useful in cases where risk for the fetus is contingent upon inheritance of a paternal variant that the woman does not have. Both pathogenic and non-pathogenic variants that the woman does not have can be detected...
2024: Methods in Molecular Biology
https://read.qxmd.com/read/38284448/reasons-for-failure-of-noninvasive-prenatal-test-for-cell-free-fetal-dna-in-maternal-peripheral-blood
#18
JOURNAL ARTICLE
Xiangsha Kong, Lin Zhang, Ruifeng Yang, Haiying Zhang, Meihong Ren, Xiang Wang, Ling Zhu, Hongsong Chen, Huiying Rao
BACKGROUND: To explore reasons for the failure of noninvasive prenatal test (NIPT) for cell-free fetal DNA (cffDNA) in maternal peripheral blood, and discuss appropriate treatment schemes after the failure of the test. METHODS: Altogether 41,136 pregnant women participated in NIPT. Blood samples were taken again from pregnant women who failed the first blood collection upon their informed consent. Prenatal genetic counseling or prenatal diagnosis was recommended for pregnant women with final NIPT failure...
January 2024: Molecular Genetics & Genomic Medicine
https://read.qxmd.com/read/38268143/cell-free-dna-screening-in-twin-pregnancies
#19
JOURNAL ARTICLE
Hye Yeon Boo, You Jung Han
Cell-free DNA (cfDNA) screening for fetal aneuploidies is clinically available and exhibits better performance than conventional serum screening tests. However, data on the clinical performance of cfDNA screening in twin pregnancies are limited. In this review, we summarized the clinical performance and evaluated the feasibility of noninvasive prenatal testing in twin pregnancies based on recent studies and recommendations. the performance of cfDNA screening for trisomy 21 in twin pregnancies is similar to that in singleton pregnancies...
January 25, 2024: Obstetrics & Gynecology Science
https://read.qxmd.com/read/38200448/soluble-urokinase-plasminogen-activator-receptor-in-vaginally-collected-amniotic-fluid-predicting-fetal-inflammatory-response-syndrome-a-prospective-cohort-study
#20
JOURNAL ARTICLE
Violeta Gulbiniene, Irena Dumalakiene, Greta Balciuniene, Ingrida Pilypiene, Ieva Narkeviciute, Vitalij Novickij, Gintautas Vysniauskis, Diana Ramasauskaite
BACKGROUND: Improving noninvasive antenatal diagnosis of fetal inflammatory response syndrome (FIRS) can assist in the evaluation of prenatal risk and reduce perinatal outcomes. This study aimed to determine whether soluble urokinase-type plasminogen activator receptor (suPAR) in vaginally collected amniotic fluid is significant in identifying FIRS after preterm premature rupture of membranes before 34 weeks of gestation. METHODS: This was a prospective cohort study of 114 pregnant women and their newborns after preterm premature rupture of membranes at 22-34+6  weeks of gestation...
January 10, 2024: BMC Pregnancy and Childbirth
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