keyword
https://read.qxmd.com/read/37520321/identification-of-novel-gene-signatures-and-immune-cell-infiltration-in-intervertebral-disc-degeneration-using-bioinformatics-analysis
#1
JOURNAL ARTICLE
Tao Tang, Zhongyuan He, Zhengya Zhu, Fuan Wang, Hongkun Chen, Fu Zhang, Jiaxiang Zhou, Jianmin Wang, Baoliang Li, Xizhe Liu, Zhiyu Zhou, Shaoyu Liu
Background: Intervertebral disc degeneration (IDD) is the leading cause of lower back pain, and an overall understanding of the molecular mechanisms related to IDD is still lacking. The purpose of this study was to explore gene signatures and immune cell infiltration related to IDD via bioinformatics analysis. Methods: A total of five expression profiles of mRNA and non-coding RNA were downloaded from the Gene Expression Omnibus (GEO) database. The potentially involved lncRNA/circRNA-miRNA-mRNA networks and protein-protein interaction networks were constructed by miRNet, circBank, STRING, and the Cytoscape database...
2023: Frontiers in Molecular Biosciences
https://read.qxmd.com/read/37493073/macular-hole-delphi-consensus-statement-mhost
#2
JOURNAL ARTICLE
Filippo Confalonieri, Hanna Haave, Susanne Binder, Agnieszka Monika Bober, Ragnheidur Bragadottir, Thomas Baerland, Rowan Faber, Vegard Forsaa, Julio J Gonzalez-Lopez, Andrea Govetto, Marta Haugstad, Domagoj Ivastinovic, Neža Čokl Jenko, Simona Delia Nicoară, Kuldar Kaljurand, Igor Kozak, Anders Kvanta, Lyubomyr Lytvynchuk, Zofia Anna Nawrocka, Sanja Petrovic Pajic, Mojca Globočnik Petrovič, Liga Radecka, Matus Rehak, Mario R Romano, Andrii Ruban, Martynas Speckauskas, Ingar Stene-Johansen, Zbynek Stranak, Angela Thaler, Anna Sophie Aagaard Thein, Ioannis Theocharis, Zoran Tomic, Xiaohe Yan, Muhamet Zekolli, Burim Zhuri, Ljubo Znaor, Beata Eva Petrovski, Miriam Kolko, Xhevat Lumi, Goran Petrovski
PURPOSE: To derive a Delphi method-based consensus for the surgical management of Full Thickness Macular Hole (FTMH) and Lamellar Macular Hole (LMH). METHODS: 37 expert VR surgeons from 21 mainly European countries participated in Delphi method-based questionnaire for diagnosis and treatment of FTMHs and LMHs. RESULTS: A total of 36 items were rated in round 1 by 37 participants, of which 10 items achieved consensus: intraoperative verification of PVD; clinical superiority of OCT-based FTMH classification; practical ineffectiveness of ocriplasmin; circular 360° ILM peeling for small macular holes; use of regular surgical technique for the size of the hole in concomitant retinal detachment; performing complete vitrectomy; SF6 gas as preferred tamponade; cataract surgery if crystalline lens is mildly/moderately opaque; removal of both ILM and LHEP in LMH surgery...
May 10, 2023: Acta Ophthalmologica
https://read.qxmd.com/read/37316932/pneumatic-vitreolysis-versus-vitrectomy-for-the-treatment-of-vitreomacular-traction-syndrome-and-macular-holes-complication-analysis-and-systematic-review-with-meta-analysis-of-functional-outcomes
#3
REVIEW
Miguel A Quiroz-Reyes, Erick A Quiroz-Gonzalez, Miguel A Quiroz-Gonzalez, Virgilio Lima-Gomez
BACKGROUND: We conducted a systematic review to compare  the effects of pneumatic vitreolysis (PV), enzymatic vitreolysis (EVL) with ocriplasmin, and pars plana vitrectomy (PPV) on vitreomacular traction (VMT) syndrome and macular holes (MHs) to assess their efficacy as treatment options. METHODS: Databases, including PubMed, ClinicalTrials.gov ( www. CLINICALTRIALS: gov ), the Cochrane Central Register of Controlled Trials (CENTRAL)-including the Cochrane Eyes and Vision Group Trials Register (The Cochrane Library 2013, Issue 2)-, Ovid MEDLINE, and EMBASE (January 2000-October 2022), were searched to identify studies comparing the outcomes of PV versus PPV, PPV versus ocriplasmin and ocriplasmin versus PV...
May 22, 2023: International Journal of Retina and Vitreous
https://read.qxmd.com/read/36931200/identification-of-key-genes-in-colorectal-cancer-diagnosis-by-co-expression-analysis-weighted-gene-co-expression-network-analysis
#4
JOURNAL ARTICLE
Mahdie Mortezapour, Leili Tapak, Fatemeh Bahreini, Rezvan Najafi, Saeid Afshar
BACKGROUND: The purpose of this study was using bioinformatics tools to identify biomarkers and molecular factors involved in the diagnosis of colorectal cancer, which are effective for the diagnosis and treatment of the disease. METHODS: We determined differentially expressed genes (DEGs) related to colorectal cancer (CRC) using the data series retrieved from GEO database. Then the weighted gene co-expression network analysis (WGCNA) was conducted to explore co-expression modules related to CRC diagnosis...
March 11, 2023: Computers in Biology and Medicine
https://read.qxmd.com/read/36654612/surgical-outcome-of-vitreomacular-traction-associated-with-macular-hole
#5
Mashal Tayyab, Kashif Iqbal, Muhammad Awaid Abid, Fawad Ur Rahman, Hamza A Tayyab
Vitreomacular Interface pathology and its surgical treatment is an ever-evolving field in vitreoretinal surgery. Various treatments have been proposed for macular holes associated with vitreomacular traction including ocriplasmin injection, gas injection, and pars plana vitrectomy with posterior hyaloid face stripping with or without internal limiting membrane peeling. The time of intervention in patients with vitreomacular traction syndrome is also a point of contention among researchers. Here we present a case of an 83-year-old male patient who presented to the outpatient department with a history of grossly decreased visual acuity of counting fingers in the right eye...
December 2022: Curēus
https://read.qxmd.com/read/36398072/identification-of-the-potential-molecular-mechanism-of-tgfbi-gene-in-persistent-atrial-fibrillation
#6
JOURNAL ARTICLE
Yao-Zong Guan, Hao Liu, Huan-Jie Huang, Dong-Yan Liang, Si-Ying Wu, Tang Zhang
Background: Transforming growth factor beta-induced protein (TGFBI, encoded by TGFBI gene), is an extracellular matrix protein, widely expressed in variety of tissues. It binds to collagens type I, II, and IV and plays important roles in the interactions of cell with cell, collagen, and matrix. It has been reported to be associated with myocardial fibrosis, and the latter is an important pathophysiologyical basis of atrial fibrillation (AF). However, the mechanism of TGFBI in AF remains unclear...
2022: Computational and Mathematical Methods in Medicine
https://read.qxmd.com/read/36186471/identification-of-the-circrna-mirna-mrna-regulatory-network-in-osteoarthritis-using-bioinformatics-analysis
#7
JOURNAL ARTICLE
Wen-Bin Xu, Vit Kotheeranurak, Huang-Lin Zhang, Jin-Yi Feng, Jing-Wei Liu, Chien-Min Chen, Guang-Xun Lin, Gang Rui
Background: Osteoarthritis (OA) is a degenerative joint disease that seriously affects the quality of people. Unfortunately, the pathogenesis of OA has not been fully known. Therefore, this study aimed to construct a ceRNA regulatory network related to OA to explore the pathogenesis of OA. Methods: Differentially expressed circRNAs (DEcircRNAs), microRNAs (DEmiRNAs), and mRNAs (DEmRNAs) were obtained from the Gene Expression Omnibus microarray data (GSE175959, GSE105027, and GSE169077). The miRNA response elements and target mRNAs were identified using bioinformatics approaches...
2022: Frontiers in Genetics
https://read.qxmd.com/read/35877658/calculating-the-individual-probability-of-successful-ocriplasmin-treatment-in-eyes-with-vitreomacular-traction-validation-and-refinement-of-a-multivariable-prediction-model
#8
JOURNAL ARTICLE
Christoph Paul, Hans-Helge Müller, Thomas Raber, Thomas Bertelmann
PURPOSE: To evaluate a multivariable model predicting the individual probability of successful intravitreal ocriplasmin (IVO) treatment in eyes with vitreomacular traction (VMT). METHODS: Data from three prospective, multicenter IVO studies (OASIS, ORBIT, and INJECT) were pooled. Patients were included if they were treated for a symptomatic VMT without a full-thickness macular hole. A prediction model for VMT resolution using the factors 'age' and 'horizontal VMT diameter' was validated by receiver operating characteristic analysis and according to grouped prediction after calibration...
2022: PloS One
https://read.qxmd.com/read/35813123/internal-limiting-membrane-peeling-in-macular-hole-surgery
#9
REVIEW
Deepti Pradhan, Lalit Agarwal, Ichhya Joshi, Anamika Kushwaha, Kshitij Aditya, Archana Kumari
Since the era when macular hole was considered untreatable, macular hole surgery has come a long way to being one of the most successful surgeries. Internal limiting membrane (ILM) peeling has been an essential step of macular hole surgery since the establishment of the role of ILM in the aetiopathogenesis and progression of macular hole. However, the novel technique was not all virtuous. It had some vices which were not evident immediately. With the advent of spectral domain optical coherence tomography, short- and long-term effects of ILM peeling on macular structures were known; and with microperimetry, its effect on the function of macula could be evaluated...
2022: German Medical Science: GMS E-journal
https://read.qxmd.com/read/35739492/comprehensive-bioinformatic-analysis-reveals-a-cancer-associated-fibroblast-gene-signature-as-a-poor-prognostic-factor-and-potential-therapeutic-target-in-gastric-cancer
#10
JOURNAL ARTICLE
Cemre Ucaryilmaz Metin, Gulnihal Ozcan
BACKGROUND: Gastric cancer is one of the deadliest cancers, currently available therapies have limited success. Cancer-associated fibroblasts (CAFs) are pivotal cells in the stroma of gastric tumors posing a great risk for progression and chemoresistance. The poor prognostic signature for CAFs is not clear in gastric cancer, and drugs that target CAFs are lacking in the clinic. In this study, we aim to identify a poor prognostic gene signature for CAFs, targeting which may increase the therapeutic success in gastric cancer...
June 23, 2022: BMC Cancer
https://read.qxmd.com/read/35525533/idiopathic-vitreomacular-traction-managed-with-initial-observation-clinical-course-and-outcomes
#11
JOURNAL ARTICLE
Veshesh Patel, Lauren Kiryakoza, Viet Chau, Annika Patel, Nicolas A Yannuzzi, Harry W Flynn, Jayanth Sridhar
OBJECTIVE: To review the clinical course and outcomes of patients with idiopathic vitreomacular traction (VMT) managed initially by observation. DESIGN: Retrospective chart review including patients with idiopathic VMT based on clinical symptoms and findings on optical coherence tomography (OCT) between January 1, 2015 and February 15, 2021. SUBJECTS: The study included 436 eyes of 317 patients with a mean age of 72.2 years ± 8.9 at initial visit and mean follow-up time of 34 months ± 19...
May 4, 2022: Ophthalmology Retina
https://read.qxmd.com/read/34964707/bioinformatics-analysis-of-candidate-genes-and-potential-therapeutic-drugs-targeting-adipose-tissue-in-obesity
#12
JOURNAL ARTICLE
Yun Yu, Yu-Han Zhang, Liang Liu, Ling-Ling Yu, Jun-Pei Li, Jing-An Rao, Feng Hu, Ling-Juan Zhu, Hui-Hui Bao, Xiao-Shu Cheng
Obesity is a complex medical condition that affects multiple organs in the body. However, the underlying mechanisms of obesity, as well as its treatment, are largely unexplored . The focus of this research was to use bioinformatics to discover possible treatment targets for obesity. To begin, the GSE133099 database was used to identify 364 differentially expressed genes (DEGs). Then, DEGs were subjected to tissue-specific analyses and enrichment analyses, followed by the creation of a protein-protein interaction (PPI) network and generation of a drug-gene interaction database to screen key genes and potential future drugs targeting obesity...
December 2022: Adipocyte
https://read.qxmd.com/read/34916576/predicting-the-individual-probability-of-macular-hole-closure-following-intravitreal-ocriplasmin-injections-for-vitreomacular-traction-release-using-baseline-characteristics
#13
JOURNAL ARTICLE
Thomas Bertelmann, Lars Berndzen, Thomas Raber, Sebastian Pfeiffer, Andreas Leha, Christoph Paul, Nicolas Feltgen, Sebastian Bemme
The primary objective was to create and establish a new formula that predicts the individual probability of macular hole closure for eyes with full thickness macular holes (FTMH) accompanied by vitreomacular traction (VMT) which received enzymatic vitreolysis using intravitreally administered ocriplasmin. The secondary objective was to evaluate the forecast reliability of a previously published formula for VMT resolution in VMT-only eyes (OddsIVO-Success  = eIntercept  × ORyears  × ORln(µm) ; ProbabilityIVO-Success  = OddsIVO-Success /(OddsIVO-Success  + 1)) on VMT resolution using the current dataset of eyes with FTMH accompanied by VMT...
December 16, 2021: Scientific Reports
https://read.qxmd.com/read/34905526/the-effect-of-intravitreal-ocriplasmin-on-hue-discrimination
#14
JOURNAL ARTICLE
James E Neffendorf, Varo Kirthi, Cristina Soare, Timothy L Jackson
SIGNIFICANCE: We report 13 patients who received ocriplasmin for symptomatic vitreomacular adhesion. Farnsworth-Munsell 100 (FM 100) hue test total error score (TES) increased from baseline to month 1, before recovering at year 1. Ocriplasmin may alter hue discrimination. PURPOSE: This study aimed to determine whether intravitreal ocriplasmin affects hue discrimination. METHODS: Thirteen patients with symptomatic vitreomacular adhesion received intravitreal ocriplasmin 125 μg...
December 1, 2021: Optometry and Vision Science: Official Publication of the American Academy of Optometry
https://read.qxmd.com/read/34840386/engineering-of-ocriplasmin-variants-by-bioinformatics-methods-for-the-reduction-of-proteolytic-and-autolytic-activities
#15
JOURNAL ARTICLE
Roghayyeh Baghban, Safar Farajnia, Younes Ghasemi, Mojtaba Mortazavi, Samaneh Ghasemali, Mostafa Zakariazadeh, Nosratollah Zarghami, Nasser Samadi
Background: Ocriplasmin has been developed for the induction of posterior vitreous detachment in patients with vitreomacular adhesion. At physiological pH, ocriplasmin is susceptible to autolytic and proteolytic degradation, limiting its activity duration. These undesirable properties of ocriplasmin can be reduced by site-directed mutagenesis, so that its enzymatic activities can be augmented. This study aimed to design ocriplasmin variants with improved biological/physicochemical characteristics via bioinformatics tools...
November 2021: Iranian Journal of Medical Sciences
https://read.qxmd.com/read/34703741/visual-functional-changes-after-ocriplasmin-injection-for-vitreomacular-traction-a-microperimetric-analysis
#16
JOURNAL ARTICLE
Claudio Furino, Alfredo Niro, Luigi Sborgia, Michele Reibaldi, Francesco Boscia, Giovanni Alessio
PURPOSE: The purpose is to evaluate functional changes after ocriplasmin injection to treat vitreomacular traction (VMT) by microperimetry. MATERIALS AND METHODS: Prospective interventional study on patients underwent an intravitreal ocriplasmin injection. Optical coherence tomography, best-corrected visual acuity (BCVA) test, and microperimetry were performed at baseline, 1 week, 1 and 3 months. Microperimeter recorded retinal sensitivity (RS) and central retinal sensitivity (CRS) at central 12° and 4°, respectively, and fixation as bivariate contour ellipse area (BCEA) at 68%, 95%, and 99% of fixation points...
July 2021: Taiwan Journal of Ophthalmology
https://read.qxmd.com/read/34513632/assessment-of-e-coli-expression-system-for-overexpression-of-active-recombinant-ocriplasmin
#17
JOURNAL ARTICLE
Roghayyeh Baghban, Safar Farajnia, Younes Ghasemi, Mojtaba Mortazavi, Naser Samadi, Nosratollah Zarghami
Purpose: Ocriplasmin (Jetrea TM) is a FDA approved recombinant enzyme utilized in the treatment of vitreomacular adhesion (VMA). This is a recombinant C-terminal fragment of human plasmin produced using yeast Pichia pastoris. Since ocriplasmin does not contain any Oor N-glycosylation or some other post-translational modifications, bacterial expression systems such as Escherichia coli could be considered as an economical host for recombinant expression. In the present study, we aimed to evaluate the efficiency of E...
May 2021: Advanced Pharmaceutical Bulletin
https://read.qxmd.com/read/34480895/ocriplasmin-for-treatment-of-vitreomacular-traction-and-macular-hole-a-systematic-literature-review-and-individual-participant-data-meta-analysis-of-randomized-controlled-double-masked-trials
#18
REVIEW
Timothy L Jackson, Julia Haller, Koenraad H Blot, Luc Duchateau, Benedicte Lescrauwaet
Ocriplasmin is used to treat vitreomacular traction (VMT), with or without full-thickness macular hole (MH). We systematically reviewed the evidence on ocriplasmin's effect on vitreomacular adhesion resolution (VMAR), MH closure, vitrectomy, and best-corrected visual acuity (BCVA) and investigated the effect of baseline covariates on outcome. We applied individual participant data meta-analyses to the entire population and to subgroups defined by MH or epiretinal membrane (ERM) presence. Safety data were pooled and tabulated...
2022: Survey of Ophthalmology
https://read.qxmd.com/read/34295149/retrospective-study-of-ellipsoid-zone-integrity-following-treatment-with-intravitreal-ocriplasmin-ozone-study
#19
Kimberly A Drenser, Dante J Pieramici, Joseph M Gunn, Daniel F Rosberger, Petra Kozma, Mitchell S Fineman, Luc Duchateau, Arshad M Khanani
Purpose: To assess generalized (GD) and focal ellipsoid zone disruption (FD) in patients with symptomatic vitreomacular adhesion (sVMA) using spectral domain optical coherence tomography (SD-OCT) following ocriplasmin. Patients and methods: OZONE was a Phase 4, retrospective study of patients with sVMA treated with a single intravitreal injection of ocriplasmin (0.125 mg). Data from adult patients with at least 6-month follow-up after ocriplasmin were included. SD-OCT was performed at baseline (within 30 days before ocriplasmin), before Day 21 post-injection (early observation, EO), and by last observation (LO) which was maximally 6 months post-injection...
2021: Clinical Ophthalmology
https://read.qxmd.com/read/34250257/post-hoc-analysis-of-ellipsoid-zone-changes-beyond-the-central-subfield-in-symptomatic-vitreomacular-adhesion-patients-from-the-oasis-trial
#20
JOURNAL ARTICLE
Swetha Bindu Velaga, Muneeswar Gupta Nittala, Michael S Ip, Luc Duchateau, SriniVas R Sadda
BACKGROUND/AIMS: OASIS is a Phase IIIb trial (NCT01429441) assessing long-term outcomes in subjects with symptomatic vitreomacular adhesion (VMA). The purpose of this study is to report on the frequency, severity, location and time course of ellipsoid zone (EZ) alterations in ocriplasmin-treated and sham control eyes in the OASIS study. METHODS: 220 patients (146 ocriplasmin, 74 sham) subjects with VMA were enrolled in this masked post hoc analysis phase IIIb, randomised, sham-controlled double-masked multicentre clinical trial...
2021: BMJ Open Ophthalmology
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