keyword
https://read.qxmd.com/read/38647391/magnetic-nanoparticle-assisted-non-viral-crispr-cas9-for-enhanced-genome-editing-to-treat-rett-syndrome
#1
JOURNAL ARTICLE
Hyeon-Yeol Cho, Myungsik Yoo, Thanapat Pongkulapa, Hudifah Rabie, Alysson R Muotri, Perry T Yin, Jeong-Woo Choi, Ki-Bum Lee
The CRISPR-Cas9 technology has the potential to revolutionize the treatment of various diseases, including Rett syndrome, by enabling the correction of genes or mutations in human patient cells. However, several challenges need to be addressed before its widespread clinical application. These challenges include the low delivery efficiencies to target cells, the actual efficiency of the genome-editing process, and the precision with which the CRISPR-Cas system operates. Herein, the study presents a Magnetic Nanoparticle-Assisted Genome Editing (MAGE) platform, which significantly improves the transfection efficiency, biocompatibility, and genome-editing accuracy of CRISPR-Cas9 technology...
April 22, 2024: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/38495533/nuclease-free-precise-genome-editing-corrects-mecp2-mutations-associated-with-rett-syndrome
#2
JOURNAL ARTICLE
Swati Bijlani, Ka Ming Pang, Lakshmi V Bugga, Sampath Rangasamy, Vinodh Narayanan, Saswati Chatterjee
Rett syndrome is an acquired progressive neurodevelopmental disorder caused by de novo mutations in the X-linked MECP2 gene which encodes a pleiotropic protein that functions as a global transcriptional regulator and a chromatin modifier. Rett syndrome predominantly affects heterozygous females while affected male hemizygotes rarely survive. Gene therapy of Rett syndrome has proven challenging due to a requirement for stringent regulation of expression with either over- or under-expression being toxic. Ectopic expression of MECP2 in conjunction with regulatory miRNA target sequences has achieved some success, but the durability of this approach remains unknown...
2024: Frontiers in genome editing
https://read.qxmd.com/read/38420187/calcium-dependent-hyperexcitability-in-human-stem-cell-derived-rett-syndrome-neuronal-networks
#3
JOURNAL ARTICLE
Kartik S Pradeepan, Fraser P McCready, Wei Wei, Milad Khaki, Wenbo Zhang, Michael W Salter, James Ellis, Julio Martinez-Trujillo
BACKGROUND: Mutations in MECP2 predominantly cause Rett syndrome and can be modeled in vitro using human stem cell-derived neurons. Patients with Rett syndrome have signs of cortical hyperexcitability, such as seizures. Human stem cell-derived MECP2 null excitatory neurons have smaller soma size and reduced synaptic connectivity but are also hyperexcitable due to higher input resistance. Paradoxically, networks of MECP2 null neurons show a decrease in the frequency of network bursts consistent with a hypoconnectivity phenotype...
March 2024: Biol Psychiatry Glob Open Sci
https://read.qxmd.com/read/38380785/zebrafish-in-understanding-molecular-pathophysiology-disease-modeling-and-developing-effective-treatments-for-rett-syndrome
#4
REVIEW
Subrata Pramanik, Asis Bala, Ajay Pradhan
Rett syndrome (RTT) is a rare but dreadful X-linked genetic disease that mainly affects young girls. It is a neurological disease that affects nerve cell development and function, resulting in severe motor and intellectual disabilities. To date, no cure is available for treating this disease. In 90% of the cases, RTT is caused by a mutation in methyl-CpG-binding protein 2 (MECP2), a transcription factor involved in the repression and activation of transcription. MECP2 is known to regulate several target genes and is involved in different physiological functions...
February 2024: Journal of Gene Medicine
https://read.qxmd.com/read/38164119/generation-and-characterization-of-a-human-neuronal-in-vitro-model-for-rett-syndrome-using-a-direct-reprogramming-method
#5
JOURNAL ARTICLE
Anna Huber, Victoria Sarne, Alexander V Beribisky, Daniela Ackerbauer, Sophia Derdak, Silvia Madritsch, Julia Etzler, Sigismund Huck, Petra Scholze, Ilayda Gorgulu, John Christodoulou, Christian R Studenik, Winfried Neuhaus, Bronwen Connor, Franco Laccone, Hannes Steinkellner
Rett Syndrome (RTT) is a severe neurodevelopmental disorder, afflicting 1 in 10,000 female births. It is caused by mutations in the X-linked MECP2 gene, which encodes for the global transcriptional regulator MeCP2. As human brain samples of RTT patients are scarce and cannot be used for downstream studies, there is a pressing need for in vitro modeling of pathological neuronal changes. Here, we employ a direct reprogramming method for the generation of neuronal cells from MeCP2-deficient and wildtype human dermal fibroblasts using two episomal plasmids encoding the transcription factors SOX2 and PAX6...
January 2, 2024: Stem Cells and Development
https://read.qxmd.com/read/38154383/generation-of-five-induced-pluripotent-stem-cell-lines-from-patients-with-mecp2-duplication-syndrome
#6
JOURNAL ARTICLE
Danielle Mendonca, Gerarda Cappuccio, Jennifer Sheppard, Magdalena Delacruz, Jesse Bengtsson, Claudia M B Carvalho, Aleksandar Bajic, Hyekyung Park, Jean J Kim, Paymaan Jafar-Nejad, Christine Coquery, Davut Pehlivan, Bernhard Suter, Mirjana Maletic-Savatic
MECP2 Duplication Syndrome (MDS) is a rare, severe neurodevelopmental disorder arising from duplications in the Xq28 region containing the MECP2 gene that predominantly affects males. We generated five human induced pluripotent stem cell (iPSC) lines from the fibroblasts of individuals carrying between 0.355 and 11.2 Mb size duplications in the chromosomal locus containing MECP2. All lines underwent extensive testing to confirm MECP2 duplication and iPSC-related features such as morphology, pluripotency markers, and trilineage differentiation potential...
December 21, 2023: Stem Cell Research
https://read.qxmd.com/read/38130373/neuronal-type-specific-epigenome-editing-to-decrease-snca-expression-implications-for-precision-medicine-in-synucleinopathies
#7
JOURNAL ARTICLE
Zhiguo Sun, Boris Kantor, Ornit Chiba-Falek
Overexpression of SNCA has been implicated in the pathogenesis of synucleinopathies, particularly Parkinson's disease (PD) and dementia with Lewy bodies (DLB). While PD and DLB share some clinical and pathological similarities, each disease presents distinct characteristics, including the primary affected brain region and neuronal type. We aimed to develop neuronal-type-specific SNCA -targeted epigenome therapies for synucleinopathies. The system is based on an all-in-one lentiviral vector comprised of CRISPR-d Sa Cas9 and guide RNA (gRNA) targeted at SNCA intron 1 fused with a synthetic repressor molecule of Krüppel-associated box (KRAB)/ methyl CpG binding protein 2 (MeCp2) transcription repression domain (TRD)...
March 12, 2024: Molecular Therapy. Nucleic Acids
https://read.qxmd.com/read/38100910/generation-of-an-integration-free-induced-pluripotent-stem-cell-line-fjmuuhi002-a-from-a-rett-syndrome-patient-with-a-heterozygous-mutation-p-r133c-in-mecp2
#8
JOURNAL ARTICLE
Yu Guo, Jiaqi Li, Wenyi Xie, Huaping Huang, Jin-Jing Li, Wanhui Lin, Ying-Qian Lu
The human iPS cell line, hiPS-RTT (FJMUi002-A), is derived from peripheral blood mononuclear cells (PBMCs) from a 12-year-old female RTT patient carrying a heterozygous p. R133C (c.397C > T) mutation in the MeCP2 gene. The hiPS-RTT cell line was generated by non-integrative reprogramming vectors encoding OCT3/4, SOX2, KLF4, and c-MYC and was free of genomically integrated reprogramming genes. The hiPS-RTT cell line had a normal karyotype, expressed pluripotency markers, and had capacity to form three germ layers in vitro and in vivo, which offering a useful resource to study the pathogenesis and treatment strategies of RTT...
December 1, 2023: Stem Cell Research
https://read.qxmd.com/read/38027357/comprehensive-transcriptomic-investigation-of-rett-syndrome-reveals-increasing-complexity-trends-from-induced-pluripotent-stem-cells-to-neurons-with-implications-for-enriched-pathways
#9
JOURNAL ARTICLE
Yusuf Caglar Odabasi, Sena Yanasik, Pelin Saglam-Metiner, Yasin Kaymaz, Ozlem Yesil-Celiktas
Rett syndrome (RTT) is a rare genetic neurodevelopmental disorder that has no cure apart from symptomatic treatments. While intense research efforts are required to fulfill this unmet need, the fundamental challenge is to obtain sufficient patient data. In this study, we used human transcriptomic data of four different sample types from RTT patients including induced pluripotent stem cells, differentiated neural progenitor cells, differentiated neurons, and postmortem brain tissues with an increasing in vivo-like complexity to unveil specific trends in gene expressions across the samples...
November 21, 2023: ACS Omega
https://read.qxmd.com/read/37976174/analysis-of-the-interplay-between-mecp2-and-histone-h1-during-in-vitro-differentiation-of-human-rencell-neural-progenitor-cells
#10
JOURNAL ARTICLE
Edilene Siqueira, Bo-Hyun Kim, Larry Reser, Robert Chow, Kerry Delaney, Manel Esteller, Mark M Ross, Jeffrey Shabanowitz, Donald F Hunt, Sonia Guil, Juan Ausiö
An immortalized neural cell line derived from the human ventral mesencephalon, called ReNCell, and its MeCP2 knock out were used. With it, we characterized the chromatin compositional transitions undergone during differentiation, with special emphasis on linker histones. While the WT cells displayed the development of dendrites and axons the KO cells did not, despite undergoing differentiation as monitored by NeuN. ReNCell expressed minimal amounts of histone H1.0 and their linker histone complement consisted mainly of histone H1...
December 2023: Epigenetics: Official Journal of the DNA Methylation Society
https://read.qxmd.com/read/37832542/synthetic-augmentation-of-bilirubin-metabolism-in-human-pluripotent-stem-cell-derived-liver-organoids
#11
JOURNAL ARTICLE
Hasan Al Reza, Zishaan Farooqui, Abid Al Reza, Callen Conroy, Kentaro Iwasawa, Yasuhiro Ogura, Keisuke Okita, Kenji Osafune, Takanori Takebe
UGT1A1 (UDP glucuronosyltransferase family 1 member A1) is the primary enzyme required for bilirubin conjugation, which is essential for preventing hyperbilirubinemia. Animal models lack key human organic anion transporting polypeptides with distinct epigenetic control over bilirubin metabolism, necessitating a human model to interrogate the regulatory mechanism behind UGT1A1 function. Here, we use induced pluripotent stem cells to develop human liver organoids that can emulate conjugation failure phenotype...
September 29, 2023: Stem Cell Reports
https://read.qxmd.com/read/37742800/sumoylation-effects-on-neural-stem-cells-self-renewal-differentiation-and-survival
#12
REVIEW
Letícia Yoshitome Queiroz, Ryoichiro Kageyama, Helena I Cimarosti
SUMO (small ubiquitin-like modifier) conjugation or SUMOylation, a post-translational modification, is a crucial regulator of protein function and cellular processes. In the context of neural stem cells (NSCs), SUMOylation has emerged as a key player, affecting their proliferation, differentiation, and survival. By modifying transcription factors, such as SOX1, SOX2, SOX3, SOX6, Bmi1, and Nanog, SUMOylation can either enhance or impair their transcriptional activity, thus impacting on NSCs self-renewal. Moreover, SUMOylation regulates neurogenesis and neuronal differentiation by modulating key proteins, such as Foxp1, Mecp2, MEF2A, and SOX10...
September 22, 2023: Neuroscience Research
https://read.qxmd.com/read/37296636/maternal-diabetes-deregulates-the-expression-of-mecp2-via-mir-26b-5p-in-mouse-embryonic-neural-stem-cells
#13
JOURNAL ARTICLE
Sukanya Shyamasundar, Seshadri Ramya, Deepika Kandilya, Dinesh Kumar Srinivasan, Boon Huat Bay, Suraiya Anjum Ansari, S Thameem Dheen
Maternal diabetes has been associated with a greater risk of neurodevelopmental disorders in offspring. It has been established that hyperglycemia alters the expression of genes and microRNAs (miRNAs) regulating the fate of neural stem cells (NSCs) during brain development. In this study, the expression of methyl-CpG-binding protein-2 (Mecp2), a global chromatin organizer and a crucial regulator of synaptic proteins, was analyzed in NSCs obtained from the forebrain of embryos of diabetic mice. Mecp2 was significantly downregulated in NSCs derived from embryos of diabetic mice when compared to controls...
May 30, 2023: Cells
https://read.qxmd.com/read/37247103/exosomal-mir-218-derived-from-mesenchymal-stem-cells-inhibits-endothelial-to-mesenchymal-transition-by-epigenetically-modulating-of-bmp2-in-pulmonary-fibrosis
#14
JOURNAL ARTICLE
Yuhao Zhao, Lei Du, Jiali Sun, Xuelian Wang, Zhilei Cong, Shuyan Chen, Fei Wang, Zhen Li
Endothelial-to-mesenchymal transition (EndMT), the process by which endothelial cells lose their characteristics and acquire mesenchymal phenotypes, participates in the pathogenic mechanism of idiopathic pulmonary fibrosis. Recently, exosomes derived from human umbilical cord mesenchymal stem cells (hucMSC-Exos) has been introduced as a promising treatment in organ fibrosis. This study aimed to explore the effects as well as the molecular mechanism for hucMSC-Exo in pulmonary fibrosis. The intravenous administration of hucMSC-Exos alleviated bleomycin-induced pulmonary fibrosis in vivo...
May 29, 2023: Cell Biology and Toxicology
https://read.qxmd.com/read/37028423/optimized-whole-genome-crispr-interference-screens-identify-arid1a-dependent-growth-regulators-in-human-induced-pluripotent-stem-cells
#15
JOURNAL ARTICLE
Sunay Usluer, Pille Hallast, Luca Crepaldi, Yan Zhou, Katie Urgo, Cansu Dincer, Jing Su, Guillaume Noell, Kaur Alasoo, Omar El Garwany, Sebastian S Gerety, Ben Newman, Oliver M Dovey, Leopold Parts
Perturbing expression is a powerful way to understand the role of individual genes, but can be challenging in important models. CRISPR-Cas screens in human induced pluripotent stem cells (iPSCs) are of limited efficiency due to DNA break-induced stress, while the less stressful silencing with an inactive Cas9 has been considered less effective so far. Here, we developed the dCas9-KRAB-MeCP2 fusion protein for screening in iPSCs from multiple donors. We found silencing in a 200 bp window around the transcription start site in polyclonal pools to be as effective as using wild-type Cas9 for identifying essential genes, but with much reduced cell numbers...
March 27, 2023: Stem Cell Reports
https://read.qxmd.com/read/36936789/dopey2-and-pcdh7-orchestrate-the-development-of-embryonic-neural-stem-cells-progenitors-in-zebrafish
#16
JOURNAL ARTICLE
Yue Xiao, Min Hu, Qiyan Lin, Ting Zhang, Siying Li, Linjuan Shu, Xiuli Song, Xiaoyong Xu, Wentong Meng, Xue Li, Hong Xu, Xianming Mo
DOPEY2 has been shown to be associated with Down syndrome and PCDH7 might be involved in Rett syndrome and MECP2 duplication syndrome. The mechanism how both proteins play roles in these syndromes are largely unknown. Here, we show that Dopey2 and Pcdh7 balance the proliferation and differentiation of neural stem cells and progenitors during embryonic neurogenesis to generate proper size and architecture of zebrafish brains. Dopey2 and Pcdh7 mutually restricted expression of each other in zebrafish embryos...
March 17, 2023: IScience
https://read.qxmd.com/read/36908084/disrupting-methyl-cpg-binding-protein-2-expression-induces-the-transformation-of-ipsc-cms-into-pacemaker-like-cells-by-insulin-gene-enhancer-binding-protein-1
#17
JOURNAL ARTICLE
Wei Zhang, Jianjun Gu, Yanxi Shi, Bichun Li, Xiang Gu
Development of biological pacemaker cells is highly essential to avoid the long-term negative effects of pacemaker use such as pacemaker-induced heart failure. Differentiation of induced pluripotent stem cells (iPSCs) into cardiomyocytes (CMs) can be induced via the regulation of the Wnt signaling pathway. Real-time quantitative PCR (qPCR), western blotting, immunofluorescence staining, and patch-clamp technique were used to analyze the ability of ISL1 to induce the transformation of iPSC-CMs into pacemaker-like cells...
March 12, 2023: Journal of Gene Medicine
https://read.qxmd.com/read/36847916/mir-422a-promotes-adipogenesis-via-mecp2-downregulation-in-human-bone-marrow-mesenchymal-stem-cells
#18
JOURNAL ARTICLE
Angelica Giuliani, Jacopo Sabbatinelli, Stefano Amatori, Laura Graciotti, Andrea Silvestrini, Giulia Matacchione, Deborah Ramini, Emanuela Mensà, Francesco Prattichizzo, Lucia Babini, Domenico Mattiucci, Elena Marinelli Busilacchi, Maria Giulia Bacalini, Emma Espinosa, Fabrizia Lattanzio, Antonio Domenico Procopio, Fabiola Olivieri, Antonella Poloni, Mirco Fanelli, Maria Rita Rippo
Methyl-CpG binding protein 2 (MeCP2) is a ubiquitous transcriptional regulator. The study of this protein has been mainly focused on the central nervous system because alterations of its expression are associated with neurological disorders such as Rett syndrome. However, young patients with Rett syndrome also suffer from osteoporosis, suggesting a role of MeCP2 in the differentiation of human bone marrow mesenchymal stromal cells (hBMSCs), the precursors of osteoblasts and adipocytes. Here, we report an in vitro downregulation of MeCP2 in hBMSCs undergoing adipogenic differentiation (AD) and in adipocytes of human and rat bone marrow tissue samples...
February 27, 2023: Cellular and Molecular Life Sciences: CMLS
https://read.qxmd.com/read/36652535/multiplex-epigenome-editing-of-mecp2-to-rescue-rett-syndrome-neurons
#19
JOURNAL ARTICLE
Junming Qian, Xiaonan Guan, Bing Xie, Chuanyun Xu, Jacqueline Niu, Xin Tang, Charles H Li, Henry M Colecraft, Rudolf Jaenisch, X Shawn Liu
Rett syndrome (RTT) is an X-linked neurodevelopmental disorder caused by loss-of-function heterozygous mutations of methyl CpG-binding protein 2 ( MECP2 ) on the X chromosome in young females. Reactivation of the silent wild-type MECP2 allele from the inactive X chromosome (Xi) represents a promising therapeutic opportunity for female patients with RTT. Here, we applied a multiplex epigenome editing approach to reactivate MECP2 from Xi in RTT human embryonic stem cells (hESCs) and derived neurons. Demethylation of the MECP2 promoter by dCas9-Tet1 with target single-guide RNA reactivated MECP2 from Xi in RTT hESCs without detectable off-target effects at the transcriptional level...
January 18, 2023: Science Translational Medicine
https://read.qxmd.com/read/36575558/kw-2449-and-vpa-exert-therapeutic-effects-on-human-neurons-and-cerebral-organoids-derived-from-mecp2-null-hescs
#20
JOURNAL ARTICLE
Ya-Jie Xu, Pei-Pei Liu, Zhong-Ze Yan, Ting-Wei Mi, Ying-Ying Wang, Qian Li, Zhao-Qian Teng, Chang-Mei Liu
BACKGROUND: Rett syndrome (RTT), mainly caused by mutations in methyl-CpG binding protein 2 (MECP2), is one of the most prevalent neurodevelopmental disorders in girls. However, the underlying mechanism of MECP2 remains largely unknown and currently there is no effective treatment available for RTT. METHODS: We generated MECP2-KO human embryonic stem cells (hESCs), and differentiated them into neurons and cerebral organoids to investigate phenotypes of MECP2 loss-of-function, potential therapeutic agents, and the underlying mechanism by transcriptome sequencing...
December 27, 2022: Stem Cell Research & Therapy
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