keyword
https://read.qxmd.com/read/38642471/total-duration-of-spontaneous-blastocyst-collapse-during-the-expansion-stage-is-an-independent-predictor-of-euploidy-and-live-birth-rates
#1
JOURNAL ARTICLE
Jiahong Zhu, Jiayi Zou, Lihong Wu, Shun Xiong, Yang Gao, Junxia Liu, Guoning Huang, Wei Han
RESEARCH QUESTION: Is the total duration of spontaneous blastocyst collapse to re-expansion before biopsy related to ploidy and live birth rates after single euploid blastocyst transfer? DESIGN: This was a retrospective cohort study of 600 preimplantation genetic testing cycles for aneuploidy (PGT-A) cycles, involving 2203 biopsied blastocysts, at a large reproductive medicine centre. Features of spontaneous blastocyst collapse from full to expanded stage, before biopsy, were observed using an embryoscope viewer for embryos cultured in a time-lapse incubator...
February 6, 2024: Reproductive Biomedicine Online
https://read.qxmd.com/read/38638145/altered-neuroepithelial-morphogenesis-and-migration-defects-in-ipsc-derived-cerebral-organoids-and-2d-neural-stem-cells-in-familial-bipolar-disorder
#2
JOURNAL ARTICLE
Kruttika Phalnikar, M Srividya, S V Mythri, N S Vasavi, Archisha Ganguly, Aparajita Kumar, Padmaja S, Kishan Kalia, Srishti S Mishra, Sreeja Kumari Dhanya, Pradip Paul, Bharath Holla, Suhas Ganesh, Puli Chandramouli Reddy, Reeteka Sud, Biju Viswanath, Bhavana Muralidharan
Bipolar disorder (BD) is a severe mental illness that can result from neurodevelopmental aberrations, particularly in familial BD, which may include causative genetic variants. In the present study, we derived cortical organoids from BD patients and healthy (control) individuals from a clinically dense family in the Indian population. Our data reveal that the patient organoids show neurodevelopmental anomalies, including organisational, proliferation and migration defects. The BD organoids show a reduction in both the number of neuroepithelial buds/cortical rosettes and the ventricular zone size...
2024: Oxf Open Neurosci
https://read.qxmd.com/read/38637233/deletion-of-myeloid-specific-orai1-calcium-channel-does-not-affect-pancreatic-tissue-damage-in-experimental-acute-pancreatitis
#3
JOURNAL ARTICLE
Wentong Mei, Xiuli Zhang, Mengya Niu, Liang Li, Xiaoyu Guo, Gang Wang, Stephen Pandol, Li Wen, Feng Cao
BACKGROUND: Store-operated Ca2+ entry (SOCE) mediated by ORAI1 channel plays a crucial role in acute pancreatitis (AP). Macrophage is an important regulator in amplifying pancreatic tissue damage, but little is known about the role of ORAI1 in macrophages. In this study, we examined the effects of macrophage-specific ORAI1 on pancreatic tissue damage in AP. METHOD: Myeloid-specific Orai1 deficient mice was generated by crossing a LysM-Cre mouse line with Orai1f/f mice...
April 5, 2024: Pancreatology: Official Journal of the International Association of Pancreatology (IAP) ... [et Al.]
https://read.qxmd.com/read/38635504/spatio-temporal-dynamics-of-early-somite-segmentation-in-the-chicken-embryo
#4
JOURNAL ARTICLE
Ana Cristina Maia-Fernandes, Ana Martins-Jesus, Nísia Borralho-Martins, Tomás Pais-de-Azevedo, Ramiro Magno, Isabel Duarte, Raquel P Andrade
During vertebrate embryo development, the body is progressively segmented along the anterior-posterior (A-P) axis early in development. The rate of somite formation is controlled by the somitogenesis embryo clock (EC), which was first described as gene expression oscillations of hairy1 (hes4) in the presomitic mesoderm of chick embryos with 15-20 somites. Here, the EC displays the same periodicity as somite formation, 90 min, whereas the posterior-most somites (44-52) only arise every 150 minutes, matched by a corresponding slower pace of the EC...
2024: PloS One
https://read.qxmd.com/read/38634855/tools-and-methods-for-high-throughput-single-cell-imaging-with-the-mother-machine
#5
JOURNAL ARTICLE
Ryan Thiermann, Michael Sandler, Gursharan Ahir, John T Sauls, Jeremy Schroeder, Steven Brown, Guillaume Le Treut, Fangwei Si, Dongyang Li, Jue D Wang, Suckjoon Jun
Despite much progress, image processing remains a significant bottleneck for high-throughput analysis of microscopy data. One popular platform for single-cell time-lapse imaging is the mother machine, which enables long-term tracking of microbial cells under precisely controlled growth conditions. While several mother machine image analysis pipelines have been developed in the past several years, adoption by a non-expert audience remains a challenge. To fill this gap, we implemented our own software, MM3, as a plugin for the multidimensional image viewer napari...
April 18, 2024: ELife
https://read.qxmd.com/read/38633385/structural-and-functional-analyses-of-nematode-derived-antimicrobial-peptides-support-the-occurrence-of-direct-mechanisms-of-worm-microbiota-interactions
#6
JOURNAL ARTICLE
James Rooney, Esperanza Rivera-de-Torre, Ruizhe Li, Kevin Mclean, Daniel R G Price, Alasdair J Nisbet, Andreas H Laustsen, Timothy P Jenkins, Andreas Hofmann, Somenath Bakshi, Ashraf Zarkan, Cinzia Cantacessi
The complex relationships between gastrointestinal (GI) nematodes and the host gut microbiota have been implicated in key aspects of helminth disease and infection outcomes. Nevertheless, the direct and indirect mechanisms governing these interactions are, thus far, largely unknown. In this proof-of-concept study, we demonstrate that the excretory-secretory products (ESPs) and extracellular vesicles (EVs) of key GI nematodes contain peptides that, when recombinantly expressed, exert antimicrobial activity in vitro against Bacillus subtilis ...
December 2024: Computational and Structural Biotechnology Journal
https://read.qxmd.com/read/38631022/metal-ion-induced-unusual-stability-of-the-metastable-vesicle-like-intermediates-evolving-during-the-self-assembly-of-phenylalanine-prominent-role-of-surface-charge-inversion
#7
JOURNAL ARTICLE
Debanjan Bagchi, Avijit Maity, Anjan Chakraborty
The underlying mechanism and intermediate formation in the self-assembly of aromatic amino acids, peptides, and proteins remain elusive despite numerous reports. We, for the first time, report that one can stabilize the intermediates by tuning the metal ion-amino acid interaction. Microscopic and spectroscopic investigations of the self-assembly of carboxybenzyl (Z)-protected phenylalanine (ZF) reveal that the bivalent metal ions eventually lead to the formation of fibrillar networks similar to blank ZF whereas the trivalent ions develop vesicle-like intermediates that do not undergo fibrillation for a prolonged time...
April 17, 2024: Journal of Physical Chemistry Letters
https://read.qxmd.com/read/38630231/live-imaging-of-migrating-neurons-and-glial-progenitors-visualized-by-in-utero-electroporation
#8
JOURNAL ARTICLE
Masashi Nishikawa, Koh-Ichi Nagata, Hidenori Tabata
During cortical development, both neurons and glial cells are generated in the germinal zone near the lateral ventricle, migrate in the correct direction, and settle in their appropriate locations. This developmental process can be clearly visualized by introducing fluorescent protein-expression vectors via in utero electroporation. In this chapter, we describe labeling methods for migrating neurons and glial progenitors, as well as methods for slice culture, and time-lapse imaging.
2024: Methods in Molecular Biology
https://read.qxmd.com/read/38626108/size-dependent-steady-state-saturation-limit-in-biomolecular-transport-through-nuclear-membranes
#9
JOURNAL ARTICLE
P K Shakhi, M M Bijeesh, J Hareesh, Toby Joseph, P Nandakumar, Geetha K Varier
The nucleus preserves the genomic DNA of eukaryotic organisms and maintains the integrity of the cell by regulating the transport of molecules across the nuclear membrane. It is hitherto assumed that small molecules having a size below the passive permeability limit are allowed to diffuse freely to the nucleus while the transport of larger molecules is regulated via an active mechanism involving energy. Here we report on the kinetics of nuclear import and export of dextran molecules having a size below the passive permeability limit...
2024: PloS One
https://read.qxmd.com/read/38622931/the-impact-of-non-disclosure-of-hiv-status-and-antiretroviral-therapy-on-hiv-recency-testing-and-incidence-algorithms
#10
JOURNAL ARTICLE
Karin van den Berg, Edward L Murphy, Gary Maartens, Vernon J Louw, Eduard Grebe
BACKGROUND AND OBJECTIVES: Accurate HIV incidence estimates among blood donors are necessary to assess the effectiveness of programs aimed at limiting transfusion-transmitted HIV. We assessed the impact of undisclosed HIV status and antiretroviral (ARV) use on HIV recency and incidence estimates using increasingly comprehensive recent infection testing algorithms. MATERIALS AND METHODS: Using 2017 donation data from first-time and lapsed donors, we populated four HIV recency algorithms: (1) serology and limiting-antigen avidity testing, (2) with individual donation nucleic amplification testing (ID-NAT) added to Algorithm 1, (3) with viral load added to Algorithm 2 and (4) with ARV testing added to Algorithm 3...
April 15, 2024: Vox Sanguinis
https://read.qxmd.com/read/38622476/advanced-glycation-end-products-of-follicular-fluid-are-associated-with-embryo-morphokinetic-parameters-and-art-outcomes
#11
JOURNAL ARTICLE
Fatemeh Roushenas, Tayebeh Izadi, Farnoosh Jafarpour, Kobra Hamdi, Maryam Pashaiasl, Amir Fattahi, Mohammad Hossein Nasr-Esfahani
Advanced glycation end products (AGEs) can disrupt antioxidant system and steroidogenesis, resulting in detrimental effects on assisted reproductive technology (ART) outcomes. This study aimed to investigate the association of AGEs in follicular fluid (FF) with morphokinetic parameters of embryos and ART outcomes. Fifty women undergoing ART treatment were studied. AGEs, glucose, 25(OH) vitamin D, malondialdehyde (MDA) levels and catalase (CAT), superoxide dismutase (SOD), and glutathione peroxidase (GPX) activities were evaluated in FF...
April 15, 2024: Reproductive Sciences
https://read.qxmd.com/read/38621389/leaf-unfolding-and-lamina-biomechanics-in-syngonium%C3%A2-podophyllum-and-pilea-peperomioides
#12
JOURNAL ARTICLE
Michelle Modert, Thomas Speck, Tom Masselter
In nature, leaves and their laminae vary in shape, appearance and unfolding behaviour. We investigated peltate leaves of two model species with peltate leaves and highly different morphology (Syngonium podophyllum and Pilea peperomioides) and two distinct unfolding patterns via time-lapse recordings: we observed successive unfolding of leaf halves in S. podophyllum and simultaneous unfolding in P. peperomioides. Furthermore, we gathered relevant morphological and biomechanical data in juvenile (unfolding) and adult (fully unfolded) plants of both species by measuring the thickness and the tensile modulus of both lamina and veins as a measure of their stiffness...
April 15, 2024: Bioinspiration & Biomimetics
https://read.qxmd.com/read/38621091/functional-oct-reveals-anisotropic-changes-of-retinal-flicker-evoked-vasodilation
#13
JOURNAL ARTICLE
Taeyoon Son, Guangying Ma, Xincheng Yao
The purpose of this study is to verify the effect of anisotropic property of retinal biomechanics on vasodilation measurement. A custom-built optical coherence tomography (OCT) was used for time-lapse imaging of flicker stimulation-evoked vessel lumen changes in mouse retinas. A comparative analysis revealed significantly larger (18.21%) lumen dilation in the axial direction compared to the lateral (10.77%) direction. The axial lumen dilation predominantly resulted from the top vessel wall movement toward the vitreous direction, whereas the bottom vessel wall remained stable...
April 15, 2024: Optics Letters
https://read.qxmd.com/read/38619164/improving-emergency-department-flow-by-introducing-a-simple-time-out-moment-the-traffic-light-study
#14
JOURNAL ARTICLE
Audrey Jc Overgaauw, Marijn Ligthart, Kaoutar Azilji, Tanca C Minderhoud, Jonne J Sikkens, Tessa H Biesheuvel, Prabath Wb Nanayakkara
BACKGROUND AND IMPORTANCE: Long waiting times in the emergency department (ED) is an increasing problem in the recent years and is expected to become an even bigger problem in the future Objective: We aimed to test the hypothesis whether increasing awareness of the time lapse with the treating physician, 2 hours after patient arrival, can reduce long patient turnaround time (TAT). METHOD: In this prospective single-center cohort study we compared and analyzed patient TAT in the ED before and after implementation of a so called 'traffic light' moment 2 hours after patient arrival...
2024: Acute Medicine
https://read.qxmd.com/read/38613651/evaluating-the-developmental-potential-of-2-1pn-derived-embryos-and-associated-chromosomal-analysis
#15
JOURNAL ARTICLE
Jiang Wang, Shun Xiong, Xiangwei Hao, Yang Gao, Fei Xia, Haiyuan Liao, Jiayi Zou, Guoning Huang, Wei Han
PURPOSE: Zygotes with 2.1 pronuclei (2.1PN) present with two normal-sized pronuclei, and an additional smaller pronucleus, that is approximately smaller than two thirds the size of a normal pronucleus. It remains unclear whether the additional pronucleus causes embryonic chromosome abnormalities. In the majority of cases, in vitro fertilization (IVF) clinics discarded 2.1PN zygotes. Thus, the present study aimed to evaluate the developmental potential and value of 2.1PN zygotes. METHODS: 2...
April 13, 2024: Journal of Assisted Reproduction and Genetics
https://read.qxmd.com/read/38613650/the-utility-of-human-two-plus-one-small-pronucleated-zygotes-2-1pn-based-on-clinical-outcomes-and-the-focused-ploidy-analysis
#16
JOURNAL ARTICLE
Hiromitsu Hattori, Noriyuki Okuyama, Kyota Ashikawa, Yoshiyuki Sakuraba, Hideki Igarashi, Koichi Kyono
PURPOSE: Are human embryos arising from two plus one small pronucleated zygotes, called 2.1 pronuclei (PN), clinically useful? METHODS: In a retrospective embryo cohort study and prospective experimental study, a total of 287 cycles in which at least one 2.1PN was identified in the fertilization check were included. Embryonic development and clinical outcome were compared for the 1395 2PN zygotes and 304 2.1PN zygotes that were siblings. All embryos were individually cultured in time-lapse systems...
April 13, 2024: Journal of Assisted Reproduction and Genetics
https://read.qxmd.com/read/38607457/understanding-and-quantifying-network-robustness-to-stochastic-inputs
#17
JOURNAL ARTICLE
Hwai-Ray Tung, Sean D Lawley
A variety of biomedical systems are modeled by networks of deterministic differential equations with stochastic inputs. In some cases, the network output is remarkably constant despite a randomly fluctuating input. In the context of biochemistry and cell biology, chemical reaction networks and multistage processes with this property are called robust. Similarly, the notion of a forgiving drug in pharmacology is a medication that maintains therapeutic effect despite lapses in patient adherence to the prescribed regimen...
April 12, 2024: Bulletin of Mathematical Biology
https://read.qxmd.com/read/38604342/simvastatin-activates-the-spindle-assembly-checkpoint-and-causes-abnormal-cell-division-by-modifying-small-gtpases
#18
JOURNAL ARTICLE
Junna Tanaka, Hiroki Kuwajima, Ryuzaburo Yuki, Yuji Nakayama
Simvastatin is an inhibitor of 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) reductase, which is a rate-limiting enzyme of the cholesterol synthesis pathway. It has been used clinically as a lipid-lowering agent to reduce low-density lipoprotein (LDL) cholesterol levels. In addition, antitumor activity has been demonstrated. Although simvastatin attenuates the prenylation of small GTPases, its effects on cell division in which small GTPases play an important role, have not been examined as a mechanism underlying its cytostatic effects...
April 9, 2024: Cellular Signalling
https://read.qxmd.com/read/38600621/generative-artificial-intelligence-to-produce-high-fidelity-blastocyst-stage-embryo-images
#19
JOURNAL ARTICLE
Ping Cao, Josien Derhaag, Edith Coonen, Han Brunner, Ganesh Acharya, Andres Salumets, Masoud Zamani Esteki
STUDY QUESTION: Can generative artificial intelligence (AI) models produce high-fidelity images of human blastocysts? SUMMARY ANSWER: Generative AI models exhibit the capability to generate high-fidelity human blastocyst images, thereby providing substantial training datasets crucial for the development of robust AI models. WHAT IS KNOWN ALREADY: The integration of AI into IVF procedures holds the potential to enhance objectivity and automate embryo selection for transfer...
April 10, 2024: Human Reproduction
https://read.qxmd.com/read/38598843/modelling-myeloma-dissemination-in-vitro-with-hmsc-interacting-subpopulations-of-ina-6-cells-and-their-aggregation-detachment-dynamics
#20
JOURNAL ARTICLE
Martin Kuric, Susanne Beck, Doris Schneider, Wyonna Rindt, Marietheres Evers, Jutta Meissner-Weigl, Sabine Zeck, Melanie Krug, Marietta Herrmann, Tanja Nicole Hartmann, Ellen Leich, Maximilian Rudert, Denitsa Docheva, Anja Seckinger, Dirk Hose, Franziska Jundt, Regina Ebert
Multiple myeloma involves early dissemination of malignant plasma cells across the bone marrow; however, the initial steps of dissemination remain unclear. Human bone marrow-derived mesenchymal stromal cells (hMSCs) stimulate myeloma cell expansion (e.g., IL-6) and simultaneously retain myeloma cells via chemokines (e.g., CXCL12) and adhesion factors. Hence, we hypothesized that the imbalance between cell division and retention drives dissemination. We present an in vitro model using primary hMSCs co-cultured with INA-6 myeloma cells...
April 10, 2024: Cancer Res Commun
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