keyword
https://read.qxmd.com/read/38612777/transmembrane-protein-tmem230-regulator-of-glial-cell-vascular-mimicry-and-endothelial-cell-angiogenesis-in-high-grade-heterogeneous-infiltrating-gliomas-and-glioblastoma
#1
JOURNAL ARTICLE
Cinzia Cocola, Edoardo Abeni, Valentina Martino, Eleonora Piscitelli, Paride Pelucchi, Ettore Mosca, Alice Chiodi, Tasnim Mohamed, Mira Palizban, Giovanni Porta, Helga Palizban, Giovanni Nano, Francesco Acquati, Antonino Bruno, Burkhard Greve, Daniela Gerovska, Valerio Magnaghi, Daniela Mazzaccaro, Giovanni Bertalot, James Kehler, Cristiana Balbino, Marcos J Arauzo-Bravo, Martin Götte, Ileana Zucchi, Rolland A Reinbold
High-grade gliomas (HGGs) and glioblastoma multiforme (GBM) are characterized by a heterogeneous and aggressive population of tissue-infiltrating cells that promote both destructive tissue remodeling and aberrant vascularization of the brain. The formation of defective and permeable blood vessels and microchannels and destructive tissue remodeling prevent efficient vascular delivery of pharmacological agents to tumor cells and are the significant reason why therapeutic chemotherapy and immunotherapy intervention are primarily ineffective...
April 3, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38576019/systematic-proteome-wide-mendelian-randomization-using-the-human-plasma-proteome-to-identify-therapeutic-targets-for-lung-adenocarcinoma
#2
JOURNAL ARTICLE
Long Zhang, Yajun Xiong, Jie Zhang, Yuying Feng, Aiguo Xu
BACKGROUND: Lung adenocarcinoma (LUAD) is the predominant histological subtype of lung cancer and the leading cause of cancer-related mortality. Identifying effective drug targets is crucial for advancing LUAD treatment strategies. METHODS: This study employed proteome-wide Mendelian randomization (MR) and colocalization analyses. We collected data on 1394 plasma proteins from a protein quantitative trait loci (pQTL) study involving 4907 individuals. Genetic associations with LUAD were derived from the Transdisciplinary Research in Cancer of the Lung (TRICL) study, including 11,245 cases and 54,619 controls...
April 4, 2024: Journal of Translational Medicine
https://read.qxmd.com/read/38431116/pathogenic-roles-for-rnaset2-in-clear-cell-renal-cell-carcinoma
#3
JOURNAL ARTICLE
Taylor Peak, Yijun Tian, Aman Patel, Tim Shaw, Alyssa Obermayer, Jose Laborde, Youngchul Kim, Joseph Johnson, Paul Stewart, Bin Fang, Jamie K Teer, John Koomen, Anders Berglund, Doug Marchion, Natasha Francis, Paola Ramos Echevarria, Jasreman Dhillon, Noel Clark, Andrew Chang, Wade Sexton, Logan Zemp, Jad Chahoud, Liang Wang, Brandon Manley
A specific splicing isoform of RNASET2 is associated with worse oncologic outcomes in clear cell renal cell carcinoma (ccRCC). However, the interplay between wild type RNASET2 and its splice variant and how this might contribute to the pathogenesis of ccRCC remains poorly understood. We sought to better understand the relationship of RNASET2 in the pathogenesis of ccRCC and the interplay with a pathogenic splicing isoform (RNASET2-SV) and the tumor immune microenvironment. Using data from The Cancer Genome Atlas (TCGA) and Clinical Proteomic Tumor Analysis Consortium (CPTAC), we correlated clinical variables to RNASET2 expression and the presence of a specific RNASET2-SV...
February 29, 2024: Laboratory Investigation; a Journal of Technical Methods and Pathology
https://read.qxmd.com/read/38424269/dynamic-relationship-among-extracellular-matrix-and-body-wall-cells-in-hirudo-verbana-morphogenesis
#4
JOURNAL ARTICLE
Laura Pulze, Nicolò Baranzini, Francesco Acquati, Gaia Marcolli, Annalisa Grimaldi
A great bulk of recent experimental evidence suggests the key role of the complex crosstalk between the extracellular matrix (ECM) and the cellular component of tissues during morphogenesis and embryogenesis. In particular, remodeling of the ECM and of its physical interactions pattern with surrounding cells represent two crucial processes that might be involved in muscle development. However, little information is available on this topic, especially on invertebrate species. To obtain new insights on how tuning the ECM microenvironment might drive cellular fate during embryonic development, we used the invertebrate medicinal leech Hirudo verbana as a valuable experimental model, due to its simple anatomy and the recapitulation of many aspects of the basic biological processes of vertebrates...
March 1, 2024: Cell and Tissue Research
https://read.qxmd.com/read/38239149/progress-in-leukodystrophies-with-zebrafish
#5
REVIEW
Hung-Yu Shih, Quentin Raas, Joshua L Bonkowsky
Inherited leukodystrophies are genetic disorders characterized by abnormal white matter in the central nervous system. Although individually rare, there are more than 400 distinct types of leukodystrophies with a cumulative incidence of 1 in 4500 live births. The pathophysiology of most leukodystrophies is poorly understood, there are treatments for only a few, and there is significant morbidity and mortality, suggesting a critical need for improvements in this field. A variety of animal, cell, and induced pluripotent stem cell-derived models have been developed for leukodystrophies, but with significant limitations in all models...
January 2024: Development, Growth & Differentiation
https://read.qxmd.com/read/37679715/systematic-analysis-of-rnaset2-gene-as-a-potential-prognostic-and-immunological-biomarker-in-clear-cell-renal-cell-carcinoma
#6
JOURNAL ARTICLE
Yifu Liu, Zhicheng Zhang, Ping Xi, Ru Chen, Xiaofeng Cheng, Ji Liu, Qiqi Zhu, Yechen Nie, Ting Sun, Binbin Gong, Siyuan Wang
BACKGROUND: RNASET2 has been identified as an oncogene with anti-angiogenic and immunomodulatory effects in a variety of cancers, but its function in clear cell renal cell carcinoma (ccRCC) is still not well understood. METHODS: The RNASET2 expression matrix was extracted from the The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) datasets and analyzed for diagnostic and prognostic value. RNASET2 mRNA expression was detected by quantitative polymerase chain reaction (qPCR) in ccRCC patients and renal cancer cell lines...
September 7, 2023: BMC Cancer
https://read.qxmd.com/read/37636479/screening-of-renal-clear-cell-carcinoma-prognostic-marker-genes-based-on-tcga-and-gtex-chip-data-and-construction-of-transcription-factor-related-regulatory-networks
#7
JOURNAL ARTICLE
Wei Zhu, Lingfeng Wu, Wenhua Xie, Gaoyue Zhang, Yanqin Gu, Yansong Hou, Yi He
This study aimed to identify prognostic marker genes for renal clear cell carcinoma (RCCC) and construct a regulatory network of transcription factors and prognostic marker genes. Three hundred eighty-six genes were significantly differentially expressed in RCCC, with functional enrichment analysis suggesting a relationship between these genes and kidney function and development. Cox and Lasso regression analyses revealed 10 prognostic marker genes (RNASET2, MSC, DPEP1, FGF1, ATP1A1, CLDN10, PLG, SLC44A1, PCSK1N, and LGI4) that accurately predicted RCCC patient prognosis...
August 2023: Heliyon
https://read.qxmd.com/read/37633478/musashi-2-binds-with-fbxo6-to-induce-rnaset2-ubiquitination-and-chemokine-signaling-pathway-during-vascular-smooth-muscle-cell-phenotypic-switch-in-atherosclerosis
#8
JOURNAL ARTICLE
Tao Zhang, Shusheng Wu, Rongwei Xu, Shuguang Zhang, Minghai Wang, Jie Li
OBJECTIVE: The objective of this study is to determine how Musashi-2 (MSI2) affects vascular smooth muscle cell (VSMC) phenotypic switch and contributes to atherosclerosis (AS). METHODS: Primary mouse VSMCs were transfected with MSI2 specific siRNA and treated with platelet-derived growth factor-BB (PDGF-BB). The proliferation, cell-cycle, and migration of VSMCs were determined by CCK-8, flow cytometry, wound healing, and transwell assays. Western blot and qRT-PCR were conducted to analyze the protein and mRNA expression...
August 24, 2023: Cellular Signalling
https://read.qxmd.com/read/37264263/comprehensive-analysis-of-single-cell-rna-seq-and-bulk-rna-seq-revealed-the-heterogeneity-and-convergence-of-the-immune-microenvironment-in-renal-cell-carcinoma
#9
JOURNAL ARTICLE
Shihui Lv, Liping Tao, Hongbing Liao, Zhiming Huang, Yongyong Lu
Substantial progress has been made in cancer biology and treatment in recent years, but the clinical outcome of patients with renal cell carcinoma (RCC) remains unsatisfactory. The tumor microenvironment (TME) is a potential target. By analyzing single-cell RNA sequencing (sc-RNAseq) data from six RCC tumor samples, this study identified 11 different cell types in the RCC cellular microenvironment, indicating a high degree of intratumoral heterogeneity. Through re-dimensionality reduction clustering of epithelial cells, neutrophils, macrophages, and T cells, we deeply reveal differences in the RCC tumor microenvironment...
June 2, 2023: Functional & Integrative Genomics
https://read.qxmd.com/read/36728187/hif2%C3%AE-induced-upregulation-of-rnaset2-promotes-triglyceride-synthesis-and-enhances-cell-migration-in-clear-cell-renal-cell-carcinoma
#10
JOURNAL ARTICLE
Yanmei Quan, Jun Dai, Sian Zhou, Lingyi Zhao, Lixing Jin, Yijing Long, Siwei Liu, Yanqin Hu, Yue Liu, Juping Zhao, Zhide Ding
Clear cell renal cell carcinoma (ccRCC), the most common malignant subtype of renal cell carcinoma, is characterized by the accumulation of lipid droplets in the cytoplasm. RNASET2 is a protein coding gene with a low expression level in ovarian cancers, but it is overexpressed in poorly differentiated neuroendocrine carcinomas. There is a correlation between RNASET2 upregulation and triglyceride expression levels in human serum, but is unknown if such an association is a factor contributing to lipid accumulation in ccRCC...
February 2, 2023: FEBS Open Bio
https://read.qxmd.com/read/36466822/diagnostic-and-therapeutic-potential-of-rnaset2-in-crohn-s-disease-disease-risk-polymorphism-modulates-allelic-imbalance-in-expression-and-circulating-protein-levels-and-recombinant-rnaset2-attenuates-pro-inflammatory-cytokine-secretion
#11
JOURNAL ARTICLE
Eva Biener-Ramanujan, Florian Rosier, Simon G Coetzee, Dermot D P McGovern, Dennis Hazelett, Stephan R Targan, Rivkah Gonsky
Ribonuclease T2 gene (RNASET2) variants are associated in genome wide association studies (GWAS) with risk for several autoimmune diseases, including Crohn's disease (CD). In T cells, a functional and biological relationship exists between TNFSF15-mediated enhancement of IFN-γ production, mucosal inflammation and RNASET2. Disease risk variants are associated with decreased mRNA expression and clinical characteristics of severe CD; however, functional classifications of variants and underlying molecular mechanisms contributing to pathogenesis remain largely unknown...
2022: Frontiers in Immunology
https://read.qxmd.com/read/36180758/a-potential-role-of-human-rnaset2-overexpression-in-the-pathogenesis-of-graves-disease
#12
JOURNAL ARTICLE
Daniela Gallo, Annarosaria De Vito, Rossella Roncoroni, Antonino Bruno, Eliana Piantanida, Luigi Bartalena, Maria Laura Tanda, Lorenzo Mortara, Francesco Acquati
Genetic variation of the gene encoding for the only human enzyme of the T2 ribonucleases family (RNASET2) emerged in genome-wide association studies as a putative risk hotspot for Graves' disease (GD). T2 ribonucleases activities include immune regulation, induction of cell apoptosis and differentiation. Several reports supported the hypothesis that RNASET2 represents a "danger" message addressed to the innate immune system in peculiar conditions. This was a longitudinal, case-control study. RNASET2 protein levels were assessed in blood samples from 34 consecutive newly diagnosed GD patients and in healthy controls...
September 30, 2022: Endocrine
https://read.qxmd.com/read/36054934/myelin-oligodendrocyte-glycoprotein-associated-disease-is-associated-with-bank1-rnaset2-and-tnip1-polymorphisms
#13
JOURNAL ARTICLE
Yaqing Shu, Xiaoyu Ma, Chen Chen, Yuge Wang, Xiaobo Sun, Liang Zhang, Zhengqi Lu, Frank Petersen, Wei Qiu, Xinhua Yu
AIM: Here we aimed to compare association of common immune-related genetic variants with three autoimmune central nervous system (CNS) demyelinating diseases, namely myelin oligodendrocyte glycoprotein-associated disease (MOGAD), multiple sclerosis (MS) and neuromyelitis optica spectrum disorder (NMOSD). METHODS: In this retrospective cross-sectional study, 26 common immune-related single nucleotide polymorphisms were genotyped in 102 patients with MOGAD, 100 patients with MS, 198 patients with NMOSD and 541 healthy control subjects recruited from Guangzhou, China...
November 15, 2022: Journal of Neuroimmunology
https://read.qxmd.com/read/36012339/human-rnaset2-a-highly-pleiotropic-and-evolutionary-conserved-tumor-suppressor-gene-involved-in-the-control-of-ovarian-cancer-pathogenesis
#14
REVIEW
Antonino Bruno, Douglas M Noonan, Roberto Valli, Giovanni Porta, Roberto Taramelli, Lorenzo Mortara, Francesco Acquati
Ovarian cancer represents one of the most malignant gynecological cancers worldwide, with an overall 5-year survival rate, being locked in the 25-30% range in the last decade. Cancer immunotherapy is currently one of the most intensively investigated and promising therapeutic strategy and as such, is expected to provide in the incoming years significant benefits for ovarian cancer treatment as well. Here, we provide a detailed survey on the highly pleiotropic oncosuppressive roles played by the human RNASET2 gene, whose protein product has been consistently reported to establish a functional crosstalk between ovarian cancer cells and key cellular effectors of the innate immune system (the monocyte/macrophages lineage), which is in turn able to promote the recruitment to the cancer tissue of M1-polarized, antitumoral macrophages...
August 13, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/35938021/a-four-microrna-panel-in-serum-as-a-potential-biomarker-for-screening-renal-cell-carcinoma
#15
JOURNAL ARTICLE
Rongkang Li, Chong Lu, Xinji Li, Xuan Chen, Guocheng Huang, Zhenyu Wen, Hang Li, Lingzhi Tao, Yimin Hu, Zhengping Zhao, Zebo Chen, Yongqing Lai
Background: Renal cell carcinoma (RCC) has been a major health problem and is one of the most malignant tumors around the world. Serum microRNA (miRNA) profiles previously have been reported as non-invasive biomarkers in cancer screening. The aim of this study was to explore serum miRNAs as potential biomarkers for screening RCC. Methods: A three-phase study was conducted to explore serum miRNAs as potential biomarkers for screening RCC. In the screening phase, 12 candidate miRNAs related to RCC were selected for further study by the ENCORI database with 517 RCC patients and 71 NCs...
2022: Frontiers in Genetics
https://read.qxmd.com/read/35718636/proteogenomic-epigenetic-and-clinical-implications-of-recurrent-aberrant-splice-variants-in-clear-cell-renal-cell-carcinoma
#16
JOURNAL ARTICLE
Andrew Chang, Nicholas H Chakiryan, Dongliang Du, Paul A Stewart, Yonghong Zhang, Yijun Tian, Alex C Soupir, Kiah Bowers, Bin Fang, Ashley Morganti, Jamie K Teer, Youngchul Kim, Philippe E Spiess, Jad Chahoud, Jerald D Noble, Ryan M Putney, Anders E Berglund, Timothy J Robinson, John M Koomen, Liang Wang, Brandon J Manley
BACKGROUND: Alternative mRNA splicing can be dysregulated in cancer, resulting in the generation of aberrant splice variants (SVs). Given the paucity of actionable genomic mutations in clear cell renal cell carcinoma (ccRCC), aberrant SVs may be an avenue to novel mechanisms of pathogenesis. OBJECTIVE: To identify and characterize aberrant SVs enriched in ccRCC. DESIGN, SETTING, AND PARTICIPANTS: Using RNA-seq data from the Cancer Cell Line Encyclopedia, we identified neojunctions uniquely expressed in ccRCC...
October 2022: European Urology
https://read.qxmd.com/read/35697269/aif-1-and-rnaset2-are-involved-in-the-inflammatory-response-in-the-mediterranean-mussel-mytilus-galloprovincialis-following-vibrio-infection
#17
JOURNAL ARTICLE
M G Parisi, N Baranzini, M Dara, C La Corte, J Vizioli, M Cammarata
Filter-feeding bivalves, such as the Mytilus species, are exposed to different types of bacteria in the surrounding waters, in particular of the Vibrio genus. Mussels lack an adaptive immune system and hemocytes can recognize pathogen-associated molecular patterns (PAMPs) via pattern recognition receptors (PRRs) to activate intracellular signaling pathways to trigger the antimicrobial effectors synthesis. Among the areas of bivalve immunity that deserve study include the role of hemocyte subpopulations. Since little information are available on immune responses at the tissue level to human pathogenic vibrios commonly detected in coastal waters involved in seafood-borne diseases, in this work, immunological parameters of the hemocytes from the Mediterranean mussel M...
August 2022: Fish & Shellfish Immunology
https://read.qxmd.com/read/35334492/biomarkers-of-connective-tissue-disease-associated-interstitial-lung-disease-in-bronchoalveolar-lavage-fluid-a-label-free-mass-spectrometry-based-relative-quantification-study
#18
JOURNAL ARTICLE
Jing Ye, Pengcheng Liu, Renming Li, Hui Liu, Wenjing Pei, Changxiu Ma, Bing Shen, Dahai Zhao, Xiaoyu Chen
BACKGROUND: The pathogenesis of connective tissue disease-associated interstitial lung disease (CTD-ILD) is unclear. This study aims to identify differentially expressed proteins (DEPs) in CTD-ILD to determine the potential role of these DEPs that may play in the pathogenesis of CTD-ILD and to offer potential therapeutic targets. METHODS: Bronchoalveolar lavage fluid (BALF) samples were collected from four patients with CTD-ILD and four patients without CTD-ILD...
May 2022: Journal of Clinical Laboratory Analysis
https://read.qxmd.com/read/34881158/genome-wide-identification-and-characterization-of-legume-t2-ribonuclease-gene-family-and-analysis-of-gmarns9-a-soybean-t2-ribonuclease-gene-function-in-nodulation
#19
JOURNAL ARTICLE
Negin Azizkhani, Saeid Mirzaei, Masoud Torkzadeh-Mahani
T2 ribonuclease family (RNaseT2) proteins are secretory and nonspecific endoribonucleases that have a large conserved biological role. Family members of RNaseT2 are found in every organism and carry out important biological functions. However, little is known about the functions of these proteins in legumes, including potential roles in symbiotic nodulation. This study aimed to characterize and perform bioinformatic analysis of RNaseT2 genes in four legume species that their genome was sequenced. In total, 60 RNaseT2 genes were identified and characterized...
December 2021: 3 Biotech
https://read.qxmd.com/read/34764281/interferon-driven-brain-phenotype-in-a-mouse-model-of-rnaset2-deficient-leukoencephalopathy
#20
JOURNAL ARTICLE
Matthias Kettwig, Katharina Ternka, Kristin Wendland, Dennis Manfred Krüger, Silvia Zampar, Charlotte Schob, Jonas Franz, Abhishek Aich, Anne Winkler, M Sadman Sakib, Lalit Kaurani, Robert Epple, Hauke B Werner, Samy Hakroush, Julia Kitz, Marco Prinz, Eva Bartok, Gunther Hartmann, Simone Schröder, Peter Rehling, Marco Henneke, Susann Boretius, A Alia, Oliver Wirths, Andre Fischer, Christine Stadelmann, Stefan Nessler, Jutta Gärtner
Infantile-onset RNaseT2 deficient leukoencephalopathy is characterised by cystic brain lesions, multifocal white matter alterations, cerebral atrophy, and severe psychomotor impairment. The phenotype is similar to congenital cytomegalovirus brain infection and overlaps with type I interferonopathies, suggesting a role for innate immunity in its pathophysiology. To date, pathophysiological studies have been hindered by the lack of mouse models recapitulating the neuroinflammatory encephalopathy found in patients...
November 11, 2021: Nature Communications
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