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https://read.qxmd.com/read/38650883/photosynthetic-response-of-chlamydomonas-reinhardtii-and-chlamydomonas-sp-1710-to-zinc-toxicity
#1
JOURNAL ARTICLE
Di Zhan, Yue Liu, Na Yu, Chunbo Hao
Zinc (Zn) is an essential trace element but can lead to water contamination and ecological deterioration when present in excessive amounts. Therefore, investigating the photosynthetic response of microalgae to Zn stress is of great significance. In this study, we assessed the photosynthetic responses of neutrophilic Chlamydomonas reinhardtii and acidophilic Chlamydomonas sp. 1710 to Zn exposure for 96 h. The specific growth rate (μ), chlorophyll-a (Chl-a) content, and chlorophyll fluorescence parameters were determined...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38649569/measurement-of-algal-photosynthesis-using-a-clark-type-o-2-electrode
#2
JOURNAL ARTICLE
Steven J Burgess, Chandra Davies
The Clark-type electrode can be used to assess the rates of photosynthesis by detecting changes in O2 concentration in a culture. This chapter describes a method for a liquid phase measurement of light and dissolved inorganic carbon-dependent photosynthesis using the model green alga Chlamydomonas reinhardtii. The technique can be used to evaluate the presence or efficiency of carbon-concentrating mechanisms.
2024: Methods in Molecular Biology
https://read.qxmd.com/read/38622950/effects-of-increasing-soil-moisture-on-antarctic-desert-microbial-ecosystems
#3
JOURNAL ARTICLE
Eden Zhang, Sin Yin Wong, Paul Czechowski, Aleks Terauds, Angelique E Ray, Nicole Benaud, Devan S Chelliah, Daniel Wilkins, Kate Montgomery, Belinda C Ferrari
Overgeneralization and a lack of baseline data for microorganisms in high-latitude environments have restricted the understanding of the microbial response to climate change, which is needed to establish Antarctic conservation frameworks. To bridge this gap, we examined over 17,000 sequence variants of bacteria and microeukarya across the hyperarid Vestfold Hills and Windmill Islands regions of eastern Antarctica. Using an extended gradient forest model, we quantified multispecies response to variations along 79 edaphic gradients to explore the effects of change and wind-driven dispersal on community dynamics under projected warming trends...
April 15, 2024: Conservation Biology
https://read.qxmd.com/read/38612934/energy-transfer-and-radical-pair-dynamics-in-photosystem-i-with-different-red-chlorophyll-a-pigments
#4
JOURNAL ARTICLE
Ivo H M van Stokkum, Marc G Müller, Alfred R Holzwarth
We establish a general kinetic scheme for the energy transfer and radical-pair dynamics in photosystem I (PSI) of Chlamydomonas reinhardtii , Synechocystis PCC6803, Thermosynechococcus elongatus and Spirulina platensis grown under white-light conditions. With the help of simultaneous target analysis of transient-absorption data sets measured with two selective excitations, we resolved the spectral and kinetic properties of the different species present in PSI. WL-PSI can be described as a Bulk Chl a in equilibrium with a higher-energy Chl a, one or two Red Chl a and a reaction-center compartment (WL-RC)...
April 8, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38611528/unravelling-the-mechanisms-of-heavy-metal-tolerance-enhancement-in-hydrophilic-antioxidants-and-major-antioxidant-enzymes-is-not-crucial-for-long-term-adaptation-to-copper-in-chlamydomonas-reinhardtii
#5
JOURNAL ARTICLE
Julia Dziuba, Beatrycze Nowicka
Understanding of the mechanisms of heavy metal tolerance in algae is important for obtaining strains that can be applied in wastewater treatment. Cu is a redox-active metal directly inducing oxidative stress in exposed cells. The Cu-tolerant Chlamydomonas reinhardtii strain Cu2, obtained via long-term adaptation, displayed increased guaiacol peroxidase activity and contained more lipophilic antioxidants, i.e., α-tocopherol and plastoquinol, than did non-tolerant strain N1. In the present article, we measured oxidative stress markers; the content of ascorbate, soluble thiols, and proline; and the activity of superoxide dismutase (SOD), catalase (CAT), and ascorbate peroxidase (APX) in N1 and Cu2 strains grown in the absence or presence of excessive Cu...
March 30, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38600443/near-telomere-to-telomere-genome-assemblies-of-two-chlorella-species-unveil-the-composition-and-evolution-of-centromeres-in-green-algae
#6
JOURNAL ARTICLE
Bo Wang, Yanyan Jia, Ningxin Dang, Jie Yu, Stephen J Bush, Shenghan Gao, Wenxi He, Sirui Wang, Hongtao Guo, Xiaofei Yang, Weimin Ma, Kai Ye
BACKGROUND: Centromeres play a crucial and conserved role in cell division, although their composition and evolutionary history in green algae, the evolutionary ancestors of land plants, remains largely unknown. RESULTS: We constructed near telomere-to-telomere (T2T) assemblies for two Trebouxiophyceae species, Chlorella sorokiniana NS4-2 and Chlorella pyrenoidosa DBH, with chromosome numbers of 12 and 13, and genome sizes of 58.11 Mb and 53.41 Mb, respectively...
April 10, 2024: BMC Genomics
https://read.qxmd.com/read/38592843/assembly-and-repair-of-photosystem-ii-in-chlamydomonas-reinhardtii
#7
REVIEW
Himanshu S Mehra, Xiaozhuo Wang, Brandon P Russell, Nidhi Kulkarni, Nicholas Ferrari, Brent Larson, David J Vinyard
Oxygenic photosynthetic organisms use Photosystem II (PSII) to oxidize water and reduce plastoquinone. Here, we review the mechanisms by which PSII is assembled and turned over in the model green alga Chlamydomonas reinhardtii . This species has been used to make key discoveries in PSII research due to its metabolic flexibility and amenability to genetic approaches. PSII subunits originate from both nuclear and chloroplastic gene products in Chlamydomonas . Nuclear-encoded PSII subunits are transported into the chloroplast and chloroplast-encoded PSII subunits are translated by a coordinated mechanism...
March 12, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38592793/exchange-or-eliminate-the-secrets-of-algal-bacterial-relationships
#8
REVIEW
Bertille Burgunter-Delamare, Prateek Shetty, Trang Vuong, Maria Mittag
Algae and bacteria have co-occurred and coevolved in common habitats for hundreds of millions of years, fostering specific associations and interactions such as mutualism or antagonism. These interactions are shaped through exchanges of primary and secondary metabolites provided by one of the partners. Metabolites, such as N-sources or vitamins, can be beneficial to the partner and they may be assimilated through chemotaxis towards the partner producing these metabolites. Other metabolites, especially many natural products synthesized by bacteria, can act as toxins and damage or kill the partner...
March 13, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38591346/apx2-is-an-ascorbate-peroxidase-related-protein-that-regulates-the-levels-of-plastocyanin-in-chlamydomonas
#9
JOURNAL ARTICLE
Anna Caccamo, Félix Vega de Luna, Agnieszka E Misztak, Sébastien Pyr Dit Ruys, Didier Vertommen, Pierre Cardol, Joris Messens, Claire Remacle
The function of ascorbate peroxidase-related (APX-R) proteins, present in all green photosynthetic eukaryotes, remains unclear. This study focuses on APX-R from Chlamydomonas reinhardtii, namely, ascorbate peroxidase 2 (APX2). We showed that apx2 mutants exhibited a faster oxidation of the photosystem I primary electron donor, P700, upon sudden light increase and a slower re-reduction rate compared to the wild type, pointing to a limitation of plastocyanin. Spectroscopic, proteomic and immunoblot analyses confirmed that the phenotype was a result of lower levels of plastocyanin in the apx2 mutants...
March 2, 2024: Plant & Cell Physiology
https://read.qxmd.com/read/38589560/influence-of-salinity-nitrogen-and-phosphorus-concentrations-on-the-physiological-and-biochemical-characteristics-of-two-chlorophyceae-isolated-from-fez-freshwater-morocco
#10
JOURNAL ARTICLE
Bouchra Assobhi, Houda Ennasry, Salma Latique, Mohammed Kara, Mohammed Alaoui Mhamdi, Jamila Bahhou
Microalgae are widely exploited for numerous biotechnology applications, including biofuels. In this context, Chlamydomonas debaryana and Chlorococcum sp. were isolated from Fez freshwater (Morocco), and their growth and lipid and carbohydrate production were assessed at different concentrations of NaCl, NaNO3 , and K2 HPO4 . The results indicate a small positive variation in growth parameters linked to nutrient enrichment, with no considerable variation in carbohydrate and lipid levels in both algae. Moreover, a negative variation was recorded at increased salinity and nutrient limitation, accompanied by lipid and carbohydrate accumulation...
April 9, 2024: Scientific Reports
https://read.qxmd.com/read/38586028/mutation-of-negative-regulatory-gene-cehc1-encoding-an-fbxo3-protein-results-in-normoxic-expression-of-hyda-genes-in-chlamydomonas-reinhardtii
#11
Xiaoqing Sun, Matthew LaVoie, Paul A Lefebvre, Sean D Gallaher, Anne G Glaesener, Daniela Strenkert, Radhika Mehta, Sabeeha S Merchant, Carolyn D Silflow
Oxygen is known to prevent hydrogen production in Chlamydomonas, both by inhibiting the hydrogenase enzyme and by preventing the accumulation of HYDA-encoding transcripts. We developed a screen for mutants showing constitutive accumulation of HYDA1 transcripts in the presence of oxygen. A reporter gene required for ciliary motility, placed under the control of the HYDA1 promoter, conferred motility only in hypoxic conditions. By selecting for mutants able to swim even in the presence of oxygen we obtained strains that express the reporter gene constitutively...
March 27, 2024: bioRxiv
https://read.qxmd.com/read/38585955/dramatic-changes-in-mitochondrial-subcellular-location-and-morphology-accompany-activation-of-the-co-2-concentrating-mechanism
#12
Justin Findinier, Lydia-Marie Joubert, Michael F Schmid, Andrey Malkovskiy, Wah Chiu, Adrien Burlacot, Arthur R Grossman
Dynamic changes in intracellular ultrastructure can be critical for the ability of organisms to acclimate to environmental conditions. Microalgae, which are responsible for ∼50% of global photosynthesis, compartmentalize their Rubisco into a specialized structure known as the pyrenoid when the cells experience limiting CO 2 conditions; this compartmentalization appears to be a component of the CO 2 Concentrating Mechanism (CCM), which facilitates photosynthetic CO 2 fixation as environmental levels of inorganic carbon (Ci) decline...
March 27, 2024: bioRxiv
https://read.qxmd.com/read/38585751/the-evolutionary-origins-and-ancestral-features-of-septins
#13
Samed Delic, Brent Shuman, Shoken Lee, Shirin Bahmanyar, Michelle Momany, Masayuki Onishi
Septins are a family of membrane-associated cytoskeletal GTPases that play crucial roles in various cellular processes, such as cell division, phagocytosis, and organelle fission. Despite their importance, the evolutionary origins and ancestral function of septins remain unclear. In opisthokonts, septins form five distinct groups of orthologs, with subunits from multiple groups assembling into heteropolymers, thus supporting their diverse molecular functions. Recent studies have revealed that septins are also conserved in algae and protists, indicating an ancient origin from the last eukaryotic common ancestor...
March 27, 2024: bioRxiv
https://read.qxmd.com/read/38580061/microalgal-and-activated-sludge-processing-for-biodegradation-of-textile-dyes
#14
JOURNAL ARTICLE
Ghulam Mustafa, Muhammad Tariq Zahid, Mayur Bharat Kurade, Aliya Alvi, Faheem Ullah, Nikita Yadav, Hyunkyung Park, Moonis Ali Khan, Byong-Hun Jeon
The textile industry contributes substantially to water pollution. To investigate bioremediation of dye-containing wastewater, the decolorization and biotransformation of three textile azo dyes, Red HE8B, Reactive Green 27, and Acid Blue 29, were considered using an integrated remediation approach involving the microalga Chlamydomonas mexicana and activated sludge (ACS). At a 5 mg L-1 dye concentration, using C. mexicana and ACS alone, decolorization percentages of 39%-64% and 52%-54%, respectively, were obtained...
April 3, 2024: Environmental Pollution
https://read.qxmd.com/read/38578514/improvement-of-cell-growth-in-green-algae-chlamydomonas-reinhardtii-through-co-cultivation-with-yeast-saccharomyces-cerevisiae
#15
JOURNAL ARTICLE
Yukino Karitani, Ryosuke Yamada, Takuya Matsumoto, Hiroyasu Ogino
PURPOSE: CO2 fixation methods using green algae have attracted considerable attention because they can be applied for the fixation of dilute CO2 in the atmosphere. However, green algae generally exhibit low CO2 fixation efficiency under atmospheric conditions. Therefore, it is a challenge to improve the CO2 fixation efficiency of green algae under atmospheric conditions. Co-cultivation of certain microalgae with heterotrophic microorganisms can increase the growth potential of microalgae under atmospheric conditions...
April 5, 2024: Biotechnology Letters
https://read.qxmd.com/read/38571006/computational-modeling-of-chlamydomonas-reinhardtii-cellular-radiation-properties-with-synergistic-consideration-of-complex-structures-and-compositions
#16
JOURNAL ARTICLE
Li Lin, Miao Jiang, Xingcan Li, Jia-Yue Yang
The radiation characteristics of microalgae are of great significance for the design of photobioreactors and ocean optical remote sensing. Yet the complex structure of microalgae makes it difficult to theoretically predict its radiation characteristics based on traditional Mie theory. In this work, taking Chlamydomonas reinhardtii as an example, a multi-component cell model with a complex structure is proposed, which considers the organelles and shape of microalgae, and the volume change during the production of Chlamydomonas reinhardtii lipids...
March 25, 2024: Optics Express
https://read.qxmd.com/read/38568970/a-mutualistic-bacterium-rescues-a-green-alga-from-an-antagonist
#17
JOURNAL ARTICLE
David Carrasco Flores, Vivien Hotter, Trang Vuong, Yu Hou, Yuko Bando, Kirstin Scherlach, Bertille Burgunter-Delamare, Ron Hermenau, Anna J Komor, Prasad Aiyar, Magdalena Rose, Severin Sasso, Hans-Dieter Arndt, Christian Hertweck, Maria Mittag
Photosynthetic protists, known as microalgae, are key contributors to primary production on Earth. Since early in evolution, they coexist with bacteria in nature, and their mode of interaction shapes ecosystems. We have recently shown that the bacterium Pseudomonas protegens acts algicidal on the microalga Chlamydomonas reinhardtii. It secretes a cyclic lipopeptide and a polyyne that deflagellate, blind, and lyse the algae [P. Aiyar et al. , Nat. Commun. 8 , 1756 (2017) and V. Hotter et al. , Proc. Natl. Acad...
April 9, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38568782/the-mbo2-fap58-heterodimer-stabilizes-assembly-of-inner-arm-dynein-b-and-reveals-axoneme-asymmetries-involved-in-ciliary-waveform
#18
JOURNAL ARTICLE
Gang Fu, Katherine Augspurger, Jason Sakizadeh, Jaimee Reck, Raqual Bower, Douglas Tritschler, Long Gui, Daniela Nicastro, Mary E Porter
Cilia generate three-dimensional waveforms required for cell motility and transport of fluid, mucus, and particles over the cell surface. This movement is driven by multiple dynein motors attached to nine outer doublet microtubules that form the axoneme. The outer and inner arm dyneins are organized into 96 nm repeats tandemly arrayed along the length of the doublets. Motility is regulated in part by projections from the two central pair microtubules that contact radial spokes located near the base of the inner dynein arms in each repeat...
April 3, 2024: Molecular Biology of the Cell
https://read.qxmd.com/read/38565028/harnessing-the-potential-of-microalgae-based-systems-for-mitigating-pesticide-pollution-and-its-impact-on-their-metabolism
#19
REVIEW
Tufail Fayaz, Soujanya S Rana, Esha Goyal, Sachitra Kumar Ratha, Nirmal Renuka
Due to increased pesticide usage in agriculture, a significant concentration of pesticides is reported in the environment that can directly impact humans, aquatic flora, and fauna. Utilizing microalgae-based systems for pesticide removal is becoming more popular because of their environmentally friendly nature, ability to degrade pesticide molecules into simpler, nontoxic molecules, and cost-effectiveness of the technology. Thus, this review focused on the efficiency, mechanisms, and factors governing pesticide removal using microalgae-based systems and their effect on microalgal metabolism...
April 1, 2024: Journal of Environmental Management
https://read.qxmd.com/read/38562900/loss-of-an-extensive-ciliary-connectome-induces-proteostasis-and-cell-fate-switching-in-a-severe-motile-ciliopathy
#20
Steven L Brody, Jiehong Pan, Tao Huang, Jian Xu, Huihui Xu, Jeffrey Koenitizer, Steven K Brennan, Rashmi Nanjundappa, Thomas G Saba, Andrew Berical, Finn J Hawkins, Xiangli Wang, Rui Zhang, Moe R Mahjoub, Amjad Horani, Susan K Dutcher
Motile cilia have essential cellular functions in development, reproduction, and homeostasis. Genetic causes for motile ciliopathies have been identified, but the consequences on cellular functions beyond impaired motility remain unknown. Variants in CCDC39 and CCDC40 cause severe disease not explained by loss of motility. Using human cells with pathological variants in these genes, Chlamydomonas genetics, cryo-electron microscopy, single cell RNA transcriptomics, and proteomics, we identified perturbations in multiple cilia-independent pathways...
March 21, 2024: bioRxiv
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