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https://www.readbyqxmd.com/read/27922179/a-carbon-dioxide-stripping-model-for-mammalian-cell-culture-in-manufacturing-scale-bioreactors
#1
Zizhuo Xing, Amanda M Lewis, Michael C Borys, Zheng Jian Li
Control of carbon dioxide within the optimum range is important in mammalian bioprocesses at the manufacturing scale in order to ensure robust cell growth, high protein yields, and consistent quality attributes. The majority of bioprocess development work is done in laboratory bioreactors, in which carbon dioxide levels are more easily controlled. Some challenges in carbon dioxide control can present themselves when cell culture processes are scaled up, because carbon dioxide accumulation is a common feature due to longer gas-residence time of mammalian cell culture in large scale bioreactors...
December 6, 2016: Biotechnology and Bioengineering
https://www.readbyqxmd.com/read/27920767/ecophysiology-and-comparative-genomics-of-nitrosomonas-mobilis-ms1-isolated-from-autotrophic-nitrifying-granules-of-wastewater-treatment-bioreactor
#2
Soe Myat Thandar, Norisuke Ushiki, Hirotsugu Fujitani, Yuji Sekiguchi, Satoshi Tsuneda
Ammonia-oxidizing bacteria (AOB), which oxidize ammonia to nitrite in the first step of nitrification, play an important role in biological wastewater treatment systems. Nitrosomonas mobilis is an important and dominant AOB in various wastewater treatment systems. However, the detailed physiological and genomic properties of N. mobilis have not been thoroughly investigated because of limited success isolating pure cultures. This study investigated the key physiological characteristics of N. mobilis Ms1, which was previously isolated into pure culture from the nitrifying granules of wastewater treatment bioreactor...
2016: Frontiers in Microbiology
https://www.readbyqxmd.com/read/27919791/biosensor-assisted-transcriptional-regulator-engineering-for-methylobacterium-extorquens-am1-to-improve-mevalonate-synthesis-by-increasing-the-acetyl-coa-supply
#3
Wei-Fan Liang, Lan-Yu Cui, Jin-Yu Cui, Kai-Wen Yu, Song Yang, Chong Zhang, Xin-Hui Xing
Acetyl-CoA is not only an important intermediate metabolite for cells but also a significant precursor for production of industrially interesting metabolites. Methylobacterium extorquens AM1, a model strain of methylotrophic cell factories using methanol as carbon source, is of interest because it produces abundant coenzyme A compounds capable of directing to synthesis of different useful compounds from methanol. However, acetyl-CoA always does not efficiently accumulate in M.extorquens AM1, as it is located in the center of three cyclic central metabolic pathways...
December 2, 2016: Metabolic Engineering
https://www.readbyqxmd.com/read/27919692/improved-production-of-2-fucosyllactose-in-engineered-escherichia-coli-by-expressing-putative-%C3%AE-1-2-fucosyltransferase-wcfb-from-bacteroides-fragilis
#4
Young-Wook Chin, Ji-Yeong Kim, Jae-Han Kim, Sang-Min Jung, Jin-Ho Seo
2'-Fucosyllactose (2-FL) is one of most abundant oligosaccharides in human milk, which is involved in many biological functions for infant health. Since 2-FL has a great potential in application to functional food materials and pharmaceuticals, several microbial systems for mass production of 2-FL have been developed in recent years. Microbial production of 2-FL was suggested to be influenced by a number of factors including fucosylation activity of α-1,2-fucosyltransferase. In the present study, the wcfB gene coding for α-1,2-fucosyltransferase from Bacteroides fragilis was screened from eleven candidates of putative α-1,2-fucosyltransferase...
December 2, 2016: Journal of Biotechnology
https://www.readbyqxmd.com/read/27918289/a-bioreactor-with-an-electro-responsive-elastomeric-membrane-for-mimicking-intestinal-peristalsis
#5
Daniele Cei, Joana Costa, Giulia Gori, Gabriele Frediani, Claudio Domenici, Federico Carpi, Arti Ahluwalia
This study describes an actuated bioreactor which mimics the pulsatile contractile motion of the intestinal barrier using electro-responsive elastomers as smart materials that undergo deformation upon electrical stimulation. The device consists of an annular dielectric elastomer actuator working as a radial artificial muscle able to rhythmically contract and relax a central cell culture well. The bioreactor maintained up to 4 h of actuation at a frequency of 0.15 Hz and a strain of 8%-10%, to those of the cyclic contraction and relaxation of the small intestine...
December 5, 2016: Bioinspiration & Biomimetics
https://www.readbyqxmd.com/read/27917819/pulsatile-flow-conditioning-of-three-dimensional-bioengineered-cardiac-ventricle
#6
Nikita M Patel, Ravi K Birla
Current physical stimuli mechanical stretch bioreactor studies focus on conditioning planar and/or tubular engineered cardiac constructs. The current 3D bioreactor models in cardiac tissue engineering use differential pressure loading for structural support as opposed to conditioning. The development of the pulsatile flow conditioned ventricle (PFCV) provides a 3D mechanical stretch conditioning method to generate pump function in the engineered cardiac left ventricle. The study utilizes a chitosan bioengineered open ventricle scaffold, to produce the in vitro PFCV model...
December 5, 2016: Biofabrication
https://www.readbyqxmd.com/read/27917253/a-modular-microfluidic-bioreactor-with-improved-throughput-for-evaluation-of-polarized-renal-epithelial-cells
#7
Paul Brakeman, Simeng Miao, Jin Cheng, Chao-Zong Lee, Shuvo Roy, William H Fissell, Nicholas Ferrell
Most current microfluidic cell culture systems are integrated single use devices. This can limit throughput and experimental design options, particularly for epithelial cells, which require significant time in culture to obtain a fully differentiated phenotype. In addition, epithelial cells require a porous growth substrate in order to fully polarize their distinct apical and basolateral membranes. We have developed a modular microfluidic system using commercially available porous culture inserts to evaluate polarized epithelial cells under physiologically relevant fluid flow conditions...
November 2016: Biomicrofluidics
https://www.readbyqxmd.com/read/27917102/euler-lagrange-computational-fluid-dynamics-for-bio-reactor-scale-down-an-analysis-of-organism-lifelines
#8
Cees Haringa, Wenjun Tang, Amit T Deshmukh, Jianye Xia, Matthias Reuss, Joseph J Heijnen, Robert F Mudde, Henk J Noorman
The trajectories, referred to as lifelines, of individual microorganisms in an industrial scale fermentor under substrate limiting conditions were studied using an Euler-Lagrange computational fluid dynamics approach. The metabolic response to substrate concentration variations along these lifelines provides deep insight in the dynamic environment inside a large-scale fermentor, from the point of view of the microorganisms themselves. We present a novel methodology to evaluate this metabolic response, based on transitions between metabolic "regimes" that can provide a comprehensive statistical insight in the environmental fluctuations experienced by microorganisms inside an industrial bioreactor...
October 2016: Engineering in Life Sciences
https://www.readbyqxmd.com/read/27916739/bioengineered-tumoral-microtissues-recapitulate-desmoplastic-reaction-of-pancreatic-cancer
#9
Virginia Brancato, Valentina Comunanza, Giorgia Imparato, Davide Corà, Francesco Urciuolo, Alessio Noghero, Federico Bussolino, Paolo A Netti
: Many of the existing three-dimensional (3D) cancer models in vitro fail to represent the entire complex tumor microenvironment composed of cells and extra cellular matrix (ECM) and do not allow a reliable study of the tumoral features and progression. In this paper we reported a strategy to produce 3D in vitro microtissues of pancreatic ductal adenocarcinoma (PDAC) for studying the desmoplastic reaction activated by the stroma-cancer crosstalk. Human PDAC microtissues were obtained by co-culturing pancreatic cancer cells (PT45) and normal or cancer-associated fibroblasts within biodegradable microcarriers in a spinner flask bioreactor...
December 1, 2016: Acta Biomaterialia
https://www.readbyqxmd.com/read/27916499/quantitative-impact-of-influent-characteristics-on-nitrogen-removal-via-anammox-and-denitrification-in-a-landfill-bioreactor-case
#10
Xiaoyuan Wang, Bing Xie, Chaoqun Zhang, Yiwen Shen, Jun Lu
In this paper, Quantitative Polymerase Chain Reaction (qPCR), Illumina MiSeq sequencing and (15)N stable isotopic tracing methods were applied to study the effects of influent organic loading, BOD5/TN and NO2-N/NH4-N ratios on the combined nitrogen removal through denitrification and anammox. The results show that, the total nitrogen removal was above 90% at the optimum reaction condition: organic loading 0.04kg/m(3)·day, BOD5/TN 0.2, and NO2-N/NH4-N 1.0. Approximately 9.43% of the nitrogen removal occurred through anammox process when BOD5/TN was 0...
November 27, 2016: Bioresource Technology
https://www.readbyqxmd.com/read/27914785/effect-of-macroporous-adsorption-resin-membrane-bioreactor-hybrid-system-against-fouling-for-municipal-wastewater-treatment
#11
Weiwei Chen, Jing Luo, Ruyi Cao, Yuting Li, Jinrong Liu
Membrane bioreactor (MBR) displays significant advantages in effluent quality, sludge production, footprint, and operation. However, membrane fouling limits the application of MBR. This study investigated membrane fouling in a macroporous adsorption resin-membrane bioreactor hybrid system established by adding macroporous adsorption resin (MAR) into MBR. MAR addition increased the critical flux by 27.97%, indicating that membrane fouling was successfully mitigated. Consequently, comparative experiments were designed to analyze the pathway...
November 25, 2016: Bioresource Technology
https://www.readbyqxmd.com/read/27913026/assessing-membrane-fouling-and-the-performance-of-pilot-scale-membrane-bioreactor-mbr-to-treat-real-municipal-wastewater-during-winter-season-in-nordic-regions
#12
Khum Gurung, Mohamed Chaker Ncibi, Mika Sillanpää
In this study, the performance of a pilot-scale membrane bioreactor (MBR) to treat real municipal wastewater was assessed at low temperatures (7 to 20°C) in Nordic regions. First, the effect of low temperatures on membrane fouling was evaluated by monitoring trans-membrane pressure. A significant membrane fouling was observed when the sludge temperature inside the MBR unit was below 10°C with a 75% permeability drop, thus indicating high deterioration of the membrane performance at low temperatures. Moreover, increasing values of sludge volume index (SVI) during low temperatures showed high deterioration of sludge settleability...
November 29, 2016: Science of the Total Environment
https://www.readbyqxmd.com/read/27912768/quasi-continuous-parallel-online-scattered-light-fluorescence-and-dissolved-oxygen-tension-measurement-combined-with-monitoring-of-the-oxygen-transfer-rate-in-each-well-of-a-shaken-microtiter-plate
#13
Tobias Ladner, Markus Held, David Flitsch, Mario Beckers, Jochen Büchs
BACKGROUND: Microtiter plates (MTP) are often applied as culture vessels in high-throughput screening programs. If online measuring techniques are available, MTPs can also be applied in the first steps of process development. For such small-scale bioreactors dipping probes are usually too large; therefore, optical measurements are often used. For example, the BioLector technology allows for the online monitoring of scattered light and fluorescence in each well of a continuously orbitally shaken MTP...
December 3, 2016: Microbial Cell Factories
https://www.readbyqxmd.com/read/27912680/biomimetic-approaches-for-bone-tissue-engineering
#14
Johnathan Ng, Kara Spiller, Jonathan Bernhard, Gordana Vunjak-Novakovic
Although autologous bone grafts are considered a gold standard for the treatment of bone defects, they are limited by donor site morbidities and geometric requirements. Tissue engineering can overcome such limitations by creating fully viable biological bone grafts. We review here the use of native bone matrix, autologous mesenchymal cells and perfusion bioreactor systems as a tissue-engineering paradigm to grow bone in vitro. We also discuss emergent vascularization strategies to promote graft survival in vivo, and the role of inflammation in bone repair...
December 2, 2016: Tissue Engineering. Part B, Reviews
https://www.readbyqxmd.com/read/27912181/scaling-up-and-ionic-liquid-based-extraction-of-pectinases-from-aspergillus-flavipes-cultures
#15
Vicente E Wolf-Márquez, M Aurora Martínez-Trujillo, Guillermo Aguilar Osorio, Faustino Patiño, María S Álvarez, Ana Rodríguez, M Ángeles Sanromán, Francisco J Deive
The viability of the scaling-up of pectinases production by Aspergillus flavipes at 5L-bioreactor scale has been demonstrated by keeping constant the power input, and a drastic increase in the endo- and exopectinolytic enzyme production was recorded (7- and 40-fold, respectively). The main process variables were modelled by means of logistic and Gompertz equations. In order to overcome the limitations of the conventional downstream strategies, a novel extraction strategy was proposed on the basis of the adequate salting-out potential of two biocompatible cholinium-based ionic liquids (N1112OHCl and N1112OHH2PO4) in aqueous solutions of Tergitol, reaching more than 90% of extraction...
November 18, 2016: Bioresource Technology
https://www.readbyqxmd.com/read/27912137/a-novel-continuous-two-phase-partitioning-bioreactor-operated-with-polymeric-tubing-performance-validation-for-enhanced-biological-removal-of-toxic-substrates
#16
M Concetta Tomei, Domenica Mosca Angelucci, Andrew J Daugulis
A continuous two-phase partitioning bioreactor (C-TPPB), operated with coiled tubing made of the DuPont polymer Hytrel 8206, was tested for the bioremediation of 4-chlorophenol, as a model toxic compound. The tubing was immersed in the aqueous phase, with the contaminated water flowing tube-side, and an adapted microbial culture suspended in the bioreactor itself, with the metabolic demand of the cells creating a concentration gradient to cause the substrate to diffuse into the bioreactor for biodegradation...
November 29, 2016: Journal of Environmental Management
https://www.readbyqxmd.com/read/27911097/performance-of-an-anaerobic-membrane-bioreactor-in-which-granular-sludge-and-dynamic-filtration-are-integrated
#17
Jixiang Yang, Xin Ji, Lunhui Lu, Hua Ma, Youpeng Chen, Jinsong Guo, Fang Fang
To alleviate the fouling of a filter, simple substrates, dynamic filtration, and granular sludge were applied in an anaerobic membrane bioreactor (AnMBR). The results showed that under a transmembrane pressure < 20 kPa, the filter flux ranged between 15 and 20 l (m(-2) h)(-1) for a period of 30 days. The flux was higher than the typical flux of AnMBRs with conventional membranes and most current dynamic filters. In addition, the low cost of the filter avoided the need for a higher flux. Moreover, a stable granular sludge bed, which consumed all volatile fatty acids, was maintained...
December 2, 2016: Biofouling
https://www.readbyqxmd.com/read/27911030/acellular-endocardium-as-a-novel-biomaterial-for-the-intima-of-tissue-engineered-small-caliber-vascular-grafts
#18
Feng Wang, Xin Guan, TianYi Wu, JianOu Qiao, ZhaoQing Han, JinLong Wu, XiaoWei Yu, QingJun You
We aimed to investigate whether acellular endocardium can be used as a useful biomaterial for the intima of engineered small-caliber vascular grafts. Fresh endocardium was harvested from the swine left atrium and was decellularized by digestion with the decellularization solution of Triton X-100 and SDS containing DNase I and RNase A. Surface morphological characteristics and Young's modulus were evaluated. To analyze the effect of mechanical characteristics on cell adhesion, the decellularized endocardium was stiffened with 2...
December 2016: Artificial Organs
https://www.readbyqxmd.com/read/27907132/a-simplified-and-efficient-process-for-insulin-production-in-pichia-pastoris
#19
Sulena Polez, Domenico Origi, Sotir Zahariev, Corrado Guarnaccia, Sergio G Tisminetzky, Nataša Skoko, Marco Baralle
A significant barrier to insulin is affordability. In this manuscript we describe improvements to key steps in the insulin production process in Pichia pastoris that reduce cost and time. The strategy for recovery and processing of human insulin precursor has been streamlined to two steps from bioreactor to the transpeptidation reaction. In the first step the insulin precursor secreted during the methanol induction phase is recovered directly from the culture broth using Tangential Flow Filtration with a Prostak™ module eliminating the laborious and time-consuming multi-step clarification, including centrifugation...
2016: PloS One
https://www.readbyqxmd.com/read/27907077/transcriptome-and-multivariable-data-analysis-of-corynebacterium-glutamicum-under-different-dissolved-oxygen-conditions-in-bioreactors
#20
Yang Sun, Wenwen Guo, Fen Wang, Feng Peng, Yankun Yang, Xiaofeng Dai, Xiuxia Liu, Zhonghu Bai
Dissolved oxygen (DO) is an important factor in the fermentation process of Corynebacterium glutamicum, which is a widely used aerobic microbe in bio-industry. Herein, we described RNA-seq for C. glutamicum under different DO levels (50%, 30% and 0%) in 5 L bioreactors. Multivariate data analysis (MVDA) models were used to analyze the RNA-seq and metabolism data to investigate the global effect of DO on the transcriptional distinction of the substance and energy metabolism of C. glutamicum. The results showed that there were 39 and 236 differentially expressed genes (DEGs) under the 50% and 0% DO conditions, respectively, compared to the 30% DO condition...
2016: PloS One
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