keyword
https://read.qxmd.com/read/36627549/intraperitoneal-5-azacytidine-alleviates-nerve-injury-induced-pain-in-rats-by-modulating-dna-methylation
#21
JOURNAL ARTICLE
Xuan Li, DeZhao Liu, ZhiSen Dai, YiSheng You, Yan Chen, ChenXing Lei, YouYou Lv, Ying Wang
To investigate the role of DNA methylation in modulating chronic neuropathic pain (NPP), identify possible target genes of DNA methylation involved in this process, and preliminarily confirm the medicinal value of the DNA methyltransferases (DNMTs) inhibitor 5-azacytidine (5-AZA) in NPP by targeting gene methylation. Two rat NPP models, chronic constriction injury (CCI) and spinal nerve ligation (SNL), were used. The DNA methylation profiles in the lumbar spinal cord were assayed using an Arraystar Rat RefSeq Promoter Array...
January 11, 2023: Molecular Neurobiology
https://read.qxmd.com/read/36626425/bioinformatics-and-systems-biology-approaches-to-identify-the-effects-of-covid-19-on-neurodegenerative-diseases-a-review
#22
JOURNAL ARTICLE
Fan Bu, Ruiqian Guan, Wanyu Wang, Zhao Liu, Shijie Yin, Yonghou Zhao, Jianbo Chai
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), causing coronavirus disease (COVID-19), has been devastated by COVID-19 in an increasing number of countries and health care systems around the world since its announcement of a global pandemic on 11 March 2020. During the pandemic, emerging novel viral mutant variants have caused multiple outbreaks of COVID-19 around the world and are prone to genetic evolution, causing serious damage to human health. As confirmed cases of COVID-19 spread rapidly, there is evidence that SARS-CoV-2 infection involves the central nervous system (CNS) and peripheral nervous system (PNS), directly or indirectly damaging neurons and further leading to neurodegenerative diseases (ND), but the molecular mechanisms of ND and CVOID-19 are unknown...
December 9, 2022: Medicine (Baltimore)
https://read.qxmd.com/read/36499310/genome-wide-dna-methylation-profile-indicates-potential-epigenetic-regulation-of-aging-in-the-rhesus-macaque-thymus
#23
JOURNAL ARTICLE
Hong Qiu, Haobo Li, Ruiwen Fan, Yang Song, Xuan Pan, Chunhui Zhang, Jing Li
We analyzed whole-genome bisulfite sequencing (WGBS) and RNA sequencing data of two young (1 year old) and two adult (9 years old) rhesus macaques ( Macaca mulatta ) to characterize the genomic DNA methylation profile of the thymus and explore the molecular mechanism of age-related changes in the thymus. Combining the two-omics data, we identified correlations between DNA methylation and gene expression and found that DNA methylation played an essential role in the functional changes of the aging thymus, especially in immunity and coagulation...
November 29, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/36093104/estrogen-differentially-regulates-transcriptional-landscapes-of-preoptic-and-arcuate-kisspeptin-neuron-populations
#24
JOURNAL ARTICLE
Balázs Göcz, Szabolcs Takács, Katalin Skrapits, Éva Rumpler, Norbert Solymosi, Szilárd Póliska, William H Colledge, Erik Hrabovszky, Miklós Sárvári
Kisspeptin neurons residing in the rostral periventricular area of the third ventricle (KPRP3V ) and the arcuate nucleus (KPARC ) mediate positive and negative estrogen feedback, respectively. Here, we aim to compare transcriptional responses of KPRP3V and KPARC neurons to estrogen. Transgenic mice were ovariectomized and supplemented with either 17β-estradiol (E2) or vehicle. Fluorescently tagged KPRP3V neurons collected by laser-capture microdissection were subjected to RNA-seq. Bioinformatics identified 222 E2-dependent genes...
2022: Frontiers in Endocrinology
https://read.qxmd.com/read/35812739/causal-inference-of-genetic-variants-and-genes-in-amyotrophic-lateral-sclerosis
#25
JOURNAL ARTICLE
Siyu Pan, Xinxuan Liu, Tianzi Liu, Zhongming Zhao, Yulin Dai, Yin-Ying Wang, Peilin Jia, Fan Liu
Amyotrophic lateral sclerosis (ALS) is a fatal progressive multisystem disorder with limited therapeutic options. Although genome-wide association studies (GWASs) have revealed multiple ALS susceptibility loci, the exact identities of causal variants, genes, cell types, tissues, and their functional roles in the development of ALS remain largely unknown. Here, we reported a comprehensive post-GWAS analysis of the recent large ALS GWAS ( n = 80,610), including functional mapping and annotation (FUMA), transcriptome-wide association study (TWAS), colocalization (COLOC), and summary data-based Mendelian randomization analyses (SMR) in extensive multi-omics datasets...
2022: Frontiers in Genetics
https://read.qxmd.com/read/35551574/identification-of-tpbg-expressing-amacrine-cells-in-dat-tdtomato-mouse
#26
JOURNAL ARTICLE
Wanjing Huang, Qiang Xu, Feng Liu, Jing Su, Dongchang Xiao, Lei Tang, Zhao-Zhe Hao, Ruifeng Liu, Kangjian Xiang, Yalan Bi, Zhichao Miao, Xialin Liu, Yizhi Liu, Sheng Liu
Purpose: Neurons are the bricks of the neuronal system and experimental access to certain neuron subtypes will be of great help to decipher neuronal circuits. Here, we identified trophoblast glycoprotein (TPBG)-expressing GABAergic amacrine cells (ACs) that were selectively labeled in DAT-tdTomato transgenic mice. Methods: Retina and brain sections were prepared for immunostaining with antibodies against various biomarkers. Patch-sequencing was performed to obtain the transcriptomes of tdTomato-positive cells in DAT-tdTomato mice...
May 2, 2022: Investigative Ophthalmology & Visual Science
https://read.qxmd.com/read/35500448/salvianolic-acid-b-alleviates-comorbid-pain-in-depression-induced-by-chronic-restraint-stress-through-inhibiting-gabaergic-neuron-excitation-via-an-erk-creb-bdnf-axis-dependent-mechanism
#27
JOURNAL ARTICLE
Xinxin Liu, Zixin Hou, Mingming Han, Kemin Chen, Yuxia Wang, Jie Qing, Fengrui Yang
Pain comorbid with depression occurred frequently in clinical settings. This study aims to explore the molecular mechanism underlying antidepressant and analgetic effect of salvianolic acid B (SalB) in comorbid pain in depression induced by chronic restraint stress (CRS), which associates with GABAergic neuron activation in the amygdala and the ERK-CREB-BDNF signaling pathway. The differentially expressed genes related to comorbid pain in CRS-induced depression were screened through bioinformatics analysis...
July 2022: Journal of Psychiatric Research
https://read.qxmd.com/read/35486186/the-pv2-cluster-of-parvalbumin-neurons-in-the-murine-periaqueductal-gray-connections-and-gene-expression
#28
JOURNAL ARTICLE
Siri Leemann, Alexandre Babalian, Franck Girard, Fred Davis, Marco R Celio
The PV2 (Celio 1990), a cluster of parvalbumin-positive neurons located in the ventromedial region of the distal periaqueductal gray (PAG) has not been previously described as its own entity, leading us to study its extent, connections, and gene expression. It is an oval, bilateral, elongated cluster composed of approximately 475 parvalbumin-expressing neurons in a single mouse hemisphere. In its anterior portion it impinges upon the paratrochlear nucleus (Par4) and in its distal portion it is harbored in the posterodorsal raphe nucleus (PDR)...
July 2022: Brain Structure & Function
https://read.qxmd.com/read/35444347/identification-of-brain-regions-activated-by-sevoflurane-and-propofol-and-regional-changes-in-gene-expression
#29
JOURNAL ARTICLE
Nobutaka Kamei, Shimpei Higo, Tomoki Mizuno, Keisuke Mori, Atsuhiro Sakamoto, Hitoshi Ozawa
General anesthetics have different efficacies and side effect incidences based on their mechanism of action. However, detailed comparative studies of anesthetics are incomplete. In this study, target brain regions and gene expression changes in these brain regions were determined for sevoflurane and propofol to understand the mechanisms that cause differences among anesthetics. Rats were anesthetized with sevoflurane or propofol for 1 hr, and brain regions with anesthesia-induced changes in neuronal activity were examined by immunohistochemistry and in situ hybridization for c-Fos...
February 26, 2022: Acta Histochemica et Cytochemica
https://read.qxmd.com/read/35083397/differential-expression-of-10-genes-in-the-hypothalamus-of-two-generations-of-rats-selected-for-a-reaction-to-humans
#30
JOURNAL ARTICLE
N V Klimova, I V Chadaeva, S G Shichevich, R V Kozhemyakina
Individual behavioral differences are due to an interaction of the genotype and the environment. Phenotypic manifestation of aggressive behavior depends on the coordinated expression of gene ensembles. Nonetheless, the identification of these genes and of combinations of their mutual influence on expression remains a difficult task. Using animal models of aggressive behavior (gray rats that were selected for a reaction to humans; tame and aggressive rat strains), we evaluated the expression of 10 genes potentially associated with aggressiveness according to the literature: Cacna1b, Cacna2d3, Drd2, Egr1, Gad2, Gria2, Mapk1, Nos1, Pomc, and Syn1...
March 2021: Vavilovskii Zhurnal Genetiki i Selektsii
https://read.qxmd.com/read/34972242/impact-of-gad65-and-or-gad67-deficiency-on-perinatal-development-in-rats
#31
JOURNAL ARTICLE
Weiru Jiang, Toshikazu Kakizaki, Kazuyuki Fujihara, Shigeo Miyata, Yue Zhang, Takashi Suto, Daiki Kato, Shigeru Saito, Koji Shibasaki, Yasuki Ishizaki, Koji Isoda, Hideaki Yokoo, Hideru Obinata, Touko Hirano, Yoshiki Miyasaka, Tomoji Mashimo, Yuchio Yanagawa
GABA is a major neurotransmitter in the mammalian central nervous system. Glutamate decarboxylase (GAD) synthesizes GABA from glutamate, and two isoforms of GAD, GAD65, and GAD67, are separately encoded by the Gad2 and Gad1 genes, respectively. The phenotypes differ in severity between GAD single isoform-deficient mice and rats. For example, GAD67 deficiency causes cleft palate and/or omphalocele in mice but not in rats. In this study, to further investigate the functional roles of GAD65 and/or GAD67 and to determine the contribution of these isoforms to GABA synthesis during development, we generated various kinds of GAD isoform(s)-deficient rats and characterized their phenotypes...
February 2022: FASEB Journal: Official Publication of the Federation of American Societies for Experimental Biology
https://read.qxmd.com/read/34748236/prenatal-androgenization-causes-expression-changes-of-progesterone-and-androgen-receptor-mrnas-in-the-arcuate-nucleus-of-female-mice-across-development
#32
JOURNAL ARTICLE
Yugo Watanabe, Melanie Prescott, Rebecca E Campbell, Christine L Jasoni
Prenatal exposure to excess androgens is associated with the development of polycystic ovary syndrome (PCOS). In prenatally androgenised (PNA) mice, a model of PCOS, progesterone receptor (PR) protein expression is reduced in arcuate nucleus (ARC) GABA neurons. This suggests a mechanism for PCOS-related impaired steroid hormone feedback and implicates androgen excess with respect to inducing transcriptional repression of the PR-encoding gene Pgr in the ARC. However, the androgen sensitivity of ARC neurons and the relative gene expression of PRs over development and following prenatal androgen exposure remain unknown...
October 18, 2021: Journal of Neuroendocrinology
https://read.qxmd.com/read/34671237/increased-sociability-in-mice-lacking-intergenic-dlx-enhancers
#33
JOURNAL ARTICLE
Siavash Fazel Darbandi, Crystal Esau, Cindy Lesage-Pelletier, Simon Monis, Luc Poitras, Man Yu, Sofia Perin, Gary Hatch, Marc Ekker
The Dlx homeodomain transcription factors play important roles in the differentiation and migration of GABAergic interneuron precursors. The mouse and human genomes each have six Dlx genes organized into three convergently transcribed bigene clusters ( Dlx1/2 , Dlx3/4 , and Dlx5/6 ) with cis -regulatory elements (CREs) located in the intergenic region of each cluster. Amongst these, the I56i and I12b enhancers from the Dlx1/2 and Dlx5/6 locus, respectively, are active in the developing forebrain. I56i is also a binding site for GTF2I, a transcription factor whose function is associated with increased sociability and Williams-Beuren syndrome...
2021: Frontiers in Neuroscience
https://read.qxmd.com/read/34572079/artificial-intelligence-assisted-identification-of-genetic-factors-predisposing-high-risk-individuals-to-asymptomatic-heart-failure
#34
JOURNAL ARTICLE
Ning-I Yang, Chi-Hsiao Yeh, Tsung-Hsien Tsai, Yi-Ju Chou, Paul Wei-Che Hsu, Chun-Hsien Li, Yun-Hsuan Chan, Li-Tang Kuo, Chun-Tai Mao, Yu-Chiau Shyu, Ming-Jui Hung, Chi-Chun Lai, Huey-Kang Sytwu, Ting-Fen Tsai
Heart failure (HF) is a global pandemic public health burden affecting one in five of the general population in their lifetime. For high-risk individuals, early detection and prediction of HF progression reduces hospitalizations, reduces mortality, improves the individual's quality of life, and reduces associated medical costs. In using an artificial intelligence (AI)-assisted genome-wide association study of a single nucleotide polymorphism (SNP) database from 117 asymptomatic high-risk individuals, we identified a SNP signature composed of 13 SNPs...
September 15, 2021: Cells
https://read.qxmd.com/read/34566904/molecular-analysis-of-glutamate-decarboxylases-in-enterococcus-avium
#35
JOURNAL ARTICLE
Xinyi Gu, Jiancun Zhao, Rongling Zhang, Ruohan Yu, Tingting Guo, Jian Kong
Enterococcus avium ( E. avium ) is a common bacterium inhabiting the intestines of humans and other animals. Most strains of this species can produce gamma-aminobutyric acid (GABA) via the glutamate decarboxylase (GAD) system, but the presence and genetic organization of their GAD systems are poorly characterized. In this study, our bioinformatics analyses showed that the GAD system in E. avium strains was generally encoded by three gadB genes ( gadB1 , gadB2 , and gadB3 ), together with an antiporter gene ( gadC ) and regulator gene ( gadR ), and these genes are organized in a cluster...
2021: Frontiers in Microbiology
https://read.qxmd.com/read/34396109/x-linked-serotonin-2c-receptor-is-associated-with-a-non-canonical-pathway-for-sudden-unexpected-death-in-epilepsy
#36
JOURNAL ARTICLE
Cory A Massey, Samantha J Thompson, Ryan W Ostrom, Janice Drabek, Olafur A Sveinsson, Torbjörn Tomson, Elisabeth A Haas, Othon J Mena, Alica M Goldman, Jeffrey L Noebels
Sudden Unexpected Death in Epilepsy is a leading cause of epilepsy-related mortality, and the analysis of mouse Sudden Unexpected Death in Epilepsy models is steadily revealing a spectrum of inherited risk phenotypes based on distinct genetic mechanisms. Serotonin (5-HT) signalling enhances post-ictal cardiorespiratory drive and, when elevated in the brain, reduces death following evoked audiogenic brainstem seizures in inbred mouse models. However, no gene in this pathway has yet been linked to a spontaneous epilepsy phenotype, the defining criterion of Sudden Unexpected Death in Epilepsy...
2021: Brain communications
https://read.qxmd.com/read/34145239/foxg1-regulates-the-formation-of-cortical-gabaergic-circuit-during-an-early-postnatal-critical-period-resulting-in-autism-spectrum-disorder-like-phenotypes
#37
JOURNAL ARTICLE
Goichi Miyoshi, Yoshifumi Ueta, Akiyo Natsubori, Kou Hiraga, Hironobu Osaki, Yuki Yagasaki, Yusuke Kishi, Yuchio Yanagawa, Gord Fishell, Robert P Machold, Mariko Miyata
Abnormalities in GABAergic inhibitory circuits have been implicated in the aetiology of autism spectrum disorder (ASD). ASD is caused by genetic and environmental factors. Several genes have been associated with syndromic forms of ASD, including FOXG1. However, when and how dysregulation of FOXG1 can result in defects in inhibitory circuit development and ASD-like social impairments is unclear. Here, we show that increased or decreased FoxG1 expression in both excitatory and inhibitory neurons results in ASD-related circuit and social behavior deficits in our mouse models...
June 18, 2021: Nature Communications
https://read.qxmd.com/read/33827428/gene-expression-profiles-underlying-aggressive-behavior-in-the-prefrontal-cortex-of-cattle
#38
JOURNAL ARTICLE
Paulina G Eusebi, Natalia Sevane, Thomas O'Rourke, Manuel Pizarro, Cedric Boeckx, Susana Dunner
BACKGROUND: Aggressive behavior is an ancient and conserved trait, habitual for most animals in order to eat, protect themselves, compete for mating and defend their territories. Genetic factors have been shown to play an important role in the development of aggression both in animals and humans, displaying moderate to high heritability estimates. Although such types of behaviors have been studied in different animal models, the molecular architecture of aggressiveness remains poorly understood...
April 7, 2021: BMC Genomics
https://read.qxmd.com/read/33588899/gabaergic-neuron-specific-whole-brain-transduction-by-aav-php-b-incorporated-with-a-new-gad65-promoter
#39
JOURNAL ARTICLE
Chiaki Hoshino, Ayumu Konno, Nobutake Hosoi, Ryosuke Kaneko, Ryo Mukai, Junichi Nakai, Hirokazu Hirai
GABAergic interneurons play a critical role in tuning neural networks in the central nervous system, and their defects are associated with neuropsychiatric disorders. Currently, the mDlx enhancer is solely used for adeno-associated virus (AAV) vector-mediated transgene delivery into cortical interneurons. Here, we developed a new inhibitory neuron-specific promoter (designated as the mGAD65 promoter), with a length of 2.5 kb, from a mouse genome upstream of exon 1 of the Gad2 gene encoding glutamic acid decarboxylase (GAD) 65...
February 15, 2021: Molecular Brain
https://read.qxmd.com/read/33421591/central-endothelin-1-confers-analgesia-by-triggering-spinal-neuronal-histone-deacetylase-5-hdac5-nuclear-exclusion-in-peripheral-neuropathic-pain-in-mice
#40
JOURNAL ARTICLE
Pan Gu, Tingting Fan, Stanley Sau Ching Wong, Zhiqiang Pan, Wai Lydia Tai, Sookja Kim Chung, Chi Wai Cheung
The rationale of spinal administration of endothelin-1(ET-1) mediated anti-nociceptive effect has not been elucidated. ET-1 is reported to promote nuclear effluxion of histone deacetylase 5 (HDAC5) in myocytes, and spinal HDAC5 is implicated in modulation of pain processing. In this study, we aimed to investigate whether central ET-1 plays an anti-nociceptive role by facilitating spinal HDAC5 nuclear shuttling under neuropathic pain. Here, we demonstrate that upregulating spinal ET-1 attenuated the nociception induced by partial sciatic nerve ligation surgery and this analgesic effect mediated by ET-1 was attenuated by intrathecal injection of endothelin A receptor selective inhibitor (BQ123) or by blocking the exportation of nuclear HDAC5 by adeno-associated viruses targeting neuronal HDAC5 (AVV-HDAC5 S259/498A Mutant)...
January 6, 2021: Journal of Pain
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