keyword
https://read.qxmd.com/read/38609008/opsinlw2-serves-as-a-circadian-photoreceptor-in-the-entrainment-of-circadian-locomotor-rhythm-of-a-firebrat
#1
JOURNAL ARTICLE
Kazuki Takeuchi, Kenji Tomioka
Photic entrainment is an essential function of the circadian clock, which enables organisms to set the appropriate timing of daily behavioral and physiological events. Recent studies have shown that the mechanisms of the circadian clock and photic entrainment vary among insect species. This study aimed to elucidate the circadian photoreceptors necessary for photic entrainment in firebrats Thermobia domestica, one of the most primitive apterygote insects. A homology search of publicly available RNA sequence (RNA-seq) data from T...
April 10, 2024: Journal of Insect Physiology
https://read.qxmd.com/read/38537935/cryptochrome-2-suppresses-epithelial-mesenchymal-transition-by-promoting-trophoblastic-ferroptosis-in-unexplained-recurrent-spontaneous-abortion
#2
JOURNAL ARTICLE
Faminzi Li, Liantao Guo, Mengqi Zhou, Lu Han, Shujuan Wu, Lianzhi Wu, Jing Yang
Unexplained recurrent spontaneous abortion (URSA) is a serious reproductive issue that affects women of childbearing age. Studies have shown a close association between disrupted circadian rhythm and impaired epithelial-mesenchymal transition (EMT) process in trophoblasts during URSA, though the underlying mechanism has not been elaborated. This study aims to investigate the regulatory relationship between circadian rhythm gene cryptochrome 2 (CRY2) and ferroptosis on the migratory ability of trophoblast cells...
March 25, 2024: American Journal of Pathology
https://read.qxmd.com/read/38525241/dual-transgenic-bifc-vector-systems-for-protein-protein-interaction-analysis-in-plants
#3
JOURNAL ARTICLE
Piaojuan Chen, Meiling Ye, Yadi Chen, Qin Wang, Qiongli Wang, Ming Zhong
Protein-protein interaction (PPI) play a pivotal role in cellular signal transduction. The bimolecular fluorescence complementation (BiFC) assay offers a rapid and intuitive means to ascertain the localization and interactions of target proteins within living cells. BiFC is based on fluorescence complementation by reconstitution of a functional fluorescent protein by co-expression of N- and C-terminal fragments of this protein. When fusion proteins interact, the N- and C-terminal fragments come into close proximity, leading to the reconstitution of the fluorescent protein...
2024: Frontiers in Genetics
https://read.qxmd.com/read/38518666/effects-of-28-h-ahemeral-light-cycle-on-production-performance-egg-quality-blood-parameters-and-uterine-characteristics-of-hens-during-the-late-laying-period
#4
JOURNAL ARTICLE
Xuelu Liu, Lei Shi, Erying Hao, Xiangyu Chen, Ziwen Liu, Yifan Chen, Dehe Wang, Chenxuan Huang, Jiawei Ai, Min Wu, Yanyan Sun, Yunlei Li, Lijun Xu, Erdong Sun, Jilan Chen, Hui Chen
This study aimed to systematically determined the effect of 28 h ahemeral light cycle on production performance, egg quality, blood parameters, uterine morphological characteristics, and gene expression of hens during the late laying period. At 74 wk, 260 Hy-Line Brown layers were randomly divided into 2 groups of 130 birds each and in duplicates. Both a regular (16L:8D) and an ahemeral light cycle (16L:12D) were provided to the hens. The oviposition pattern in an ahemeral cycle shifted into darkness, with oviposition mostly occurring 3 to 5 h after light out...
January 24, 2024: Poultry Science
https://read.qxmd.com/read/38513778/bao-yuan-decoction-alleviates-fatigue-by-restraining-inflammation-and-oxidative-stress-via-the-ampk-cry2-per1-signaling-pathway
#5
JOURNAL ARTICLE
Yuan Zheng, Xueyang Ren, Xiaodan Qi, Ruolan Song, Chongjun Zhao, Jiamu Ma, Xianxian Li, Qingyue Deng, Yingyu He, Lingmei Kong, Liyan Qian, Feng Zhang, Mingxia Li, Mengyu Sun, Wei Liu, Haibin Liu, Gaimei She
ETHNOPHARMACOLOGICAL RELEVANCE: Baoyuan Decoction (BYD) was initially recorded in the classic of "Bo Ai Xin Jian" in the Ming dynasty. It is traditionally used for treating deficiency, labor and cowardice, deficiency of vital energy. In researches related to anti-fatigue effects, the reciprocal regulation of AMPK and circadian clocks likely plays an important role in anti-fatigue mechanism, while it has not yet been revealed. Therefore, we elucidated the anti-fatigue mechanism of BYD through AMPK/CRY2/PER1 pathway...
March 19, 2024: Journal of Ethnopharmacology
https://read.qxmd.com/read/38498539/susceptibility-of-field-and-laboratory-bt-susceptible-and-resistant-strains-of-helicoverpa-zea-boddie-to-hearnpv
#6
JOURNAL ARTICLE
Wilfrid Calvin, Fei Yang, Haley Kennedy, Paula G Marçon, David L Kerns
During 2021 and 2022, eight field-collected and five laboratory Helicoverpa zea strains with varying susceptibility to different Bt proteins were evaluated for their responses against HearNPV using diet-overlay bioassays. The five laboratory strains included SS (susceptible to all Bt proteins), CRY-RR (resistant to Cry1 and Cry2), VIP-RR-70 (resistant to Vip3Aa), VIP-RR-15 (resistant to Vip3Aa), and TRE-RR (resistant to Cry1, Cry2, and Vip3Aa). Our findings showed that the susceptibility of TRE-RR, VIP-RR-70, and VIP-RR-15 strains to HearNPV was similar to that of the SS strain...
February 15, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38496876/melatonin-regulates-circadian-clock-proteins-expression-in-allergic-airway-inflammation
#7
JOURNAL ARTICLE
Si-Nuo Guo, Xu-Qin Jiang, Ning Chen, Si-Ming Song, Yu Fang, Qiu-Meng Xie, Guang-He Fei, Hui-Mei Wu
Asthma demonstrates a strong circadian rhythm with disrupted molecular clock. Melatonin which can directly regulate circadian rhythm has been reported to alleviate asthma, but whether this effect is related to its regulation on circadian clock has not yet been known. Here, female C57BL/6 mice were challenged with ovalbumin (OVA) to establish allergic airway inflammation, and were treated with melatonin or Luzindole to investigate whether the expressions of circadian clock proteins were changed in response to OVA and were affected by exogenous/endogenous melatonin...
March 30, 2024: Heliyon
https://read.qxmd.com/read/38466167/paxillin-phase-separation-promotes-focal-adhesion-assembly-and-integrin-signaling
#8
JOURNAL ARTICLE
Peigang Liang, Yuchen Wu, Shanyuan Zheng, Jiaqi Zhang, Shuo Yang, Jinfang Wang, Suibin Ma, Mengjun Zhang, Zhuang Gu, Qingfeng Liu, Wenxue Jiang, Qiong Xing, Bo Wang
Focal adhesions (FAs) are transmembrane protein assemblies mediating cell-matrix connection. Although protein liquid-liquid phase separation (LLPS) has been tied to the organization and dynamics of FAs, the underlying mechanisms remain unclear. Here, we experimentally tune the LLPS of PXN/Paxillin, an essential scaffold protein of FAs, by utilizing a light-inducible Cry2 system in different cell types. In addition to nucleating FA components, light-triggered PXN LLPS potently activates integrin signaling and subsequently accelerates cell spreading...
April 1, 2024: Journal of Cell Biology
https://read.qxmd.com/read/38429983/a-dye-elution-method-for-the-quantification-of-insecticidal-crystal-proteins-from-bacillus-thuringiensis-and-its-compatibility-with-the-presence-of-agro-industrial-raw-materials-and-waste-products
#9
JOURNAL ARTICLE
María Isabel Mentel, Flavia Del Valle Loto, Mario Domingo Baigori, Licia María Pera
The insecticidal crystal proteins produced by Bacillus thuringiensis during sporulation are active ingredients against lepidopteran, dipteran, and coleopteran insects. Several methods have been reported for their quantification such as crystals counting, ELISA, and SDS-PAGE/densitometry. One of the major tasks in industrial processes is the analysis of raw materials dependency and costs. Thus, the crystal proteins quantification method is expected to be compatible with the presence of complex and inexpensive culture medium components...
March 1, 2024: Letters in Applied Microbiology
https://read.qxmd.com/read/38414323/comparative-analysis-of-locomotor-behavior-and-head-diurnal-transcriptome-regulation-by-period-and-cry2-in-the-diamondback-moth
#10
JOURNAL ARTICLE
Wenfeng Chen, Danfeng Wang, Lingqi Yu, Wenmiao Zhong, Yao Yuan, Guang Yang
Earth's rotation shapes a 24-h cycle, governing circadian rhythms in organisms. In mammals, the core clock genes, CLOCK and BMAL1, are regulated by PERIODs (PERs) and CRYPTOCHROMEs (CRYs), but their roles remain unclear in the diamondback moth, Plutella xylostella. To explore this, we studied P. xylostella, which possesses a simplified circadian system compared to mammals. In P. xylostella, we observed rhythmic expressions of the Pxper and Pxcry2 genes in their heads, with differing phases. In vitro experiments revealed that PxCRY2 repressed monarch butterfly CLK:BMAL1 transcriptional activation, while PxPER and other CRY-like proteins did not...
February 27, 2024: Insect Science
https://read.qxmd.com/read/38370612/optogenetic-regulation-of-epha1-rtk-activation-and-signaling
#11
Anna I Wurz, Kevin S Zheng, Robert M Hughes
Eph receptors are ubiquitous class of transmembrane receptors that mediate cell-cell communication, proliferation, differentiation, and migration. EphA1 receptors specifically play an important role in angiogenesis, fetal development, and cancer progression; however, studies of this receptor can be challenging as its ligand, ephrinA1, binds and activates several EphA receptors simultaneously. Optogenetic strategies could be applied to circumvent this requirement for ligand activation and enable selective activation of the EphA1 subtype...
February 7, 2024: bioRxiv
https://read.qxmd.com/read/38359290/mutations-of-the-circadian-clock-genes-cry-per-or-bmal1-have-different-effects-on-the-transcribed-and-nontranscribed-strands-of-cycling-genes
#12
JOURNAL ARTICLE
Yanyan Yang, Gang Wu, Aziz Sancar, John B Hogenesch
One important goal of circadian medicine is to apply time-of-day dosing to improve the efficacy of chemotherapy. However, limited knowledge of how the circadian clock regulates DNA repair presents a challenge to mechanism-based clinical application. We studied time-series genome-wide nucleotide excision repair in liver and kidney of wild type and three different clock mutant genotypes ( Cry1 -/- Cry2 -/- , Per1 -/- Per2 -/- , and Bmal1 -/- ). Rhythmic repair on the nontranscribed strand was lost in all three clock mutants...
February 20, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38358255/a-pdz-scaffolding-cam-mediated-pathway-in-cryptochrome-signaling
#13
JOURNAL ARTICLE
Massimo Bellanda, Milena Damulewicz, Barbara Zambelli, Elisa Costanzi, Francesco Gregoris, Stefano Mammi, Silvio C E Tosatto, Rodolfo Costa, Giovanni Minervini, Gabriella M Mazzotta
Cryptochromes are cardinal constituents of the circadian clock, which orchestrates daily physiological rhythms in living organisms. A growing body of evidence points to their participation in pathways that have not traditionally been associated with circadian clock regulation, implying that cryptochromes may be subject to modulation by multiple signaling mechanisms. In this study, we demonstrate that human CRY2 (hCRY2) forms a complex with the large, modular scaffolding protein known as Multi-PDZ Domain Protein 1 (MUPP1)...
March 2024: Protein Science
https://read.qxmd.com/read/38339119/prostaglandin-f2%C3%AE-affects-the-cycle-of-clock-gene-expression-and-mouse-behavior
#14
JOURNAL ARTICLE
Yuya Tsurudome, Yuya Yoshida, Kengo Hamamura, Takashi Ogino, Sai Yasukochi, Shinobu Yasuo, Ayaka Iwamoto, Tatsuya Yoshihara, Tomoaki Inazumi, Soken Tsuchiya, Toru Takeo, Naomi Nakagata, Shigekazu Higuchi, Yukihiko Sugimoto, Akito Tsuruta, Satoru Koyanagi, Naoya Matsunaga, Shigehiro Ohdo
Prostaglandins are bioactive compounds, and the activation of their receptors affects the expression of clock genes. However, the prostaglandin F receptor ( Ptgfr ) has no known relationship with biological rhythms. Here, we first measured the locomotor period lengths of Ptgfr-KO (B6.129- Ptgfrtm1Sna ) mice and found that they were longer under constant dark conditions (DD) than those of wild-type (C57BL/6J) mice. We then investigated the clock gene patterns within the suprachiasmatic nucleus in Ptgfr-KO mice under DD and observed a decrease in the expression of the clock gene cryptochrome 1 ( Cry1 ), which is related to the circadian cycle...
February 2, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38338765/mucosal-genes-encoding-clock-inflammation-and-their-mutual-regulators-are-disrupted-in-pediatric-patients-with-active-ulcerative-colitis
#15
JOURNAL ARTICLE
Sapir Labes, Oren Froy, Yuval Tabach, Raanan Shamir, Dror S Shouval, Yael Weintraub
Patients with active ulcerative colitis (UC) display a misalignment of the circadian clock, which plays a vital role in various immune functions. Our aim was to characterize the expression of clock and inflammation genes, and their mutual regulatory genes in treatment-naïve pediatric patients with UC. Using the Inflammatory Bowel Disease Transcriptome and Metatranscriptome Meta-Analysis (IBD TaMMA) platform and R algorithms, we analyzed rectal biopsy transcriptomic data from two cohorts (206 patients with UC vs...
January 25, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38320616/adaptive-evolution-and-loss-of-a-putative-magnetoreceptor-in-passerines
#16
JOURNAL ARTICLE
Corinna Langebrake, Georg Manthey, Anders Frederiksen, Juan S Lugo Ramos, Julien Y Dutheil, Raisa Chetverikova, Ilia A Solov'yov, Henrik Mouritsen, Miriam Liedvogel
Migratory birds possess remarkable accuracy in orientation and navigation, which involves various compass systems including the magnetic compass. Identifying the primary magnetosensor remains a fundamental open question. Cryptochromes (Cry) have been shown to be magnetically sensitive, and Cry4a from a migratory songbird seems to show enhanced magnetic sensitivity in vitro compared to Cry4a from resident species. We investigate Cry and their potential involvement in magnetoreception in a phylogenetic framework, integrating molecular evolutionary analyses with protein dynamics modelling...
February 14, 2024: Proceedings. Biological Sciences
https://read.qxmd.com/read/38311375/uncovering-the-penile-clock-expression-of-molecular-clock-proteins-in-human-penile-cavernous-tissue
#17
JOURNAL ARTICLE
Ilter Alkan, Begum Durkut, Melike Ucak, Muammer Bozkurt, Halil Lutfi Canat, Ciler Celik-Ozenci
PURPOSE: To evaluate the expression of core molecular clock genes/proteins in penile cavernous tissue from healthy male subjects and to determine whether their expression has circadian variation. MATERIALS AND METHODS: Corpus cavernosum biopsy samples were obtained from 10 healthy males with penile deviation or fracture who underwent surgical intervention during the day and night. The daytime group (n=5) underwent corpus cavernosum tissue sampling during zeitgeber time (ZT) 8-12, while the nighttime group (n=5) underwent sampling during ZT 20-24...
January 29, 2024: World Journal of Men's Health
https://read.qxmd.com/read/38306565/antidepressant-mechanism-of-traditional-chinese-medicine-involving-regulation-of-circadian-clock-genes
#18
RANDOMIZED CONTROLLED TRIAL
Shimeng Lv, Yufei Huang, Yuexiang Ma, Jing Teng
Numerous studies have demonstrated an intimate relationship between circadian rhythm disorders and the development and prevention of depression. The biological clock genes, which constitute the molecular basis of endogenous circadian rhythms, hold promising prospects for depression treatment. Based on an extensive review of recent domestic and international research, this article presents a comprehensive analysis of how traditional Chinese medicine (TCM) intervenes in depression by regulating circadian rhythms...
February 2, 2024: Medicine (Baltimore)
https://read.qxmd.com/read/38296653/-exogenous-pregnane-x-receptor-does-not-undergo-liquid-liquid-phase-separation-in-nucleus-under-cell-based-in-vitro-conditions
#19
JOURNAL ARTICLE
Pengfei Zhao, Yue Gao, Yanying Zhou, Min Huang, Shicheng Fan, Huichang Bi
Pregnane X receptor (PXR) belongs to the nuclear receptor superfamily that plays a crucial role in hepatic physiological and pathological conditions. Phase separation is a process in which biomacromolecules aggregate and condense into a dense phase as liquid condensates and coexist with a dilute phase, contributing to various cellular and biological functions. Till now, whether PXR could undergo phase separation remains unclear. This study aimed to investigate whether PXR undergoes phase separation. Analysis of the intrinsically disordered regions (IDRs) using algorithms tools indicated a low propensity of PXR to undergo phase separation...
January 31, 2024: Drug Metabolism and Disposition: the Biological Fate of Chemicals
https://read.qxmd.com/read/38288973/multi-omics-and-single-cell-sequencing-analyses-reveal-the-potential-significance-of-circadian-pathways-in-cancer-therapy
#20
JOURNAL ARTICLE
Hao Lai, Xiaoyun Xiang, Xingqing Long, Zuyuan Chen, Yanling Liu, Xiaoliang Huang
BACKGROUND: Circadian rhythm disturbance is an independent risk factor for cancer. However, few studies have been reported on circadian rhythm related genes (CRGs) in cancer, so it is important to further explore the impact of CRGs in pan-cancer. RESEARCH DESIGN AND METHODS: The Cancer Genome Atlas database was used to collect cancer-related data such as copy number variation, single nucleotide variants, methylation, and survival differences. Immunohistochemistry (IHC) was used to verify the expression of circadian rhythm hub genes...
January 30, 2024: Expert Review of Molecular Diagnostics
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