keyword
https://read.qxmd.com/read/38599008/determining-the-effects-of-genetic-linkage-when-using-a-combination-of-str-and-snp-loci-for-kinship-testing
#1
JOURNAL ARTICLE
Da Yang, Sheng Xuan Ma, Guo Liang Zhao, Ao Gao, Zhao Kun Xu
The pedigree likelihood ratio (LR) can be used for determining kinship in the forensic kinship testing. LR can be obtained by analyzing the DNA data of Short tandem repeat (STR) and single nucleotide polymorphism (SNP) loci. With the advancement of biotechnology, increasing number of genetic markers have been identified, thereby expanding the pedigree range of kinship testing. Moreover, some of the loci are physically closer to each other and genetic linkage between loci is inevitable. LRs can be calculated by accounting for linkage or ignoring linkage (LRlinkage and LRignore , respectively)...
April 4, 2024: Legal Medicine
https://read.qxmd.com/read/38585428/explaining-mobilization-for-revolts-by-private-interests-and-kinship-relations
#2
JOURNAL ARTICLE
Niccolò G Armandola, Malte Doehne, Katja Rost
Mobilization for revolts poses a significant challenge for rational choice theory because revolts are vulnerable to free-riding, which disincentivizes rational actors from mobilizing. Strong, informal relations such as kinship ties have been identified as factors that can shift the rational calculations of individuals and lead to mobilization for revolts. In social networks that are polarized by the presence of mobilized individuals, such as rebels, and actors opposing the mobilization effort such as the elite, kinship relations have not only a bridging effect but also a diverging one...
May 2024: Ration Soc
https://read.qxmd.com/read/38531404/personality-heterophily-and-friendship-as-drivers-for-successful-cooperation
#3
JOURNAL ARTICLE
Debottam Bhattacharjee, Sophie Waasdorp, Esmee Middelburg, Elisabeth H M Sterck, Jorg J M Massen
Cooperation is widespread and arguably a pivotal evolutionary force in maintaining animal societies. Yet, proximately, what underlying motivators drive individuals to cooperate remains relatively unclear. Since 'free-riders' can exploit the benefits by cheating, selecting the right partner is paramount. Such decision rules need not be based on complex calculations and can be driven by cognitively less-demanding mechanisms, like social relationships (e.g. kinship, non-kin friendships, dyadic tolerance), social status (e...
March 27, 2024: Proceedings. Biological Sciences
https://read.qxmd.com/read/38511815/translation-and-cultural-adaptation-of-the-positive-aspects-of-caregiving-scale-for-caregivers-of-people-living-with-dementia-in-brazilian-context-a-methodological-study
#4
JOURNAL ARTICLE
Sofia Cristina Iost Pavarini, Aline Cristina Martins Gratão, Camila Rafael Ferreira Campos, Diana Quirino Monteiro, Elizabeth Joan Barham, Fabiana de Souza Orlandi, Gabriela Martins, Gustavo Carrijo Barbosa, Keila Cristianne Trindade da Cruz, Larissa Corrêa, Luana Aparecida da Rocha, Ludmyla Caroline de Souza Alves, Ana Carolina Ottaviani
BACKGROUND: The Positive Aspects of Caregiving (PAC) scale is used to assess psychosocial benefits provided to caregivers by the task of caring. The PAC scale consists of nine items, assessed using a five-point Likert scale, with higher values indicating greater positive perceptions and gains from the caregiving experience. OBJECTIVE: To translate and culturally adapt the PAC scale for informal Brazilian caregivers of people with dementia. DESIGN AND SETTING: A methodological study was conducted at the Federal University of São Carlos...
2024: São Paulo Medical Journal
https://read.qxmd.com/read/38480957/parental-kinship-coefficient-but-not-paternal-coloration-predicts-early-offspring-growth-in-lake-char
#5
JOURNAL ARTICLE
Laura Garaud, David Nusbaumer, Lucas Marques da Cunha, Christian de Guttry, Laurie Ançay, Audrey Atherton, Emilien Lasne, Claus Wedekind
The 'good genes' hypotheses of sexual selection predict that females prefer males with strong ornaments because they are in good health and vigor and can afford the costs of the ornaments. A key assumption of this concept is that male health and vigor are useful predictors of genetic quality and hence offspring performance. We tested this prediction in wild-caught lake char (Salvelinus umbla) whose breeding coloration is known to reveal aspects of male health. We first reanalyzed results from sperm competition trials in which embryos of known parenthood had been raised singly in either a stress- or non-stress environment...
March 13, 2024: Heredity
https://read.qxmd.com/read/38461225/sister-predatory-mites-collectively-protect-their-eggs-against-predators
#6
JOURNAL ARTICLE
Yasuyuki Choh, Arne Janssen
Group-living animals sometimes cooperatively protect their offspring against predators. This behavior is observed in a wide range of taxa but, to the best of our knowledge, this is the first report of its occurrence in arthropods that are not eusocial. Adult female predatory mites Gynaeseius liturivorus protect their eggs against egg predators, the predatory mite species Neoseiulus californicus. In the field, several adult female G. liturivorus were often found on the same plant structures such as folded leaves...
March 9, 2024: Oecologia
https://read.qxmd.com/read/38409938/intermediate-conduction-velocity-in-two-cases-of-charcot-marie-tooth-disease-type-1a
#7
Pedro José Tomaselli, Julian Blake, James M Polke, Osvaldo José Moreira do Nascimento, Mary M Reilly, Wilson Marques Júnior, Matilde Laurá
BACKGROUND AND PURPOSE: Charcot-Marie-Tooth disease type 1A (CMT1A) is the most prevalent hereditary neuropathy worldwide and classically has slow nerve conduction velocity (NCV), in most cases below 38 m/s. Two unrelated patients with motor NCVs in the upper limbs above 38 m/s are reported. METHOD: Case report. RESULTS: Two genetically confirmed CMT1A patients are presented, from two unrelated families (one of British origin and the other of Brazilian origin)...
February 26, 2024: European Journal of Neurology
https://read.qxmd.com/read/38406357/kinship-analysis-of-meca-gene-of-methicillin-resistant-staphylococcus-aureus-isolated-from-milk-and-risk-factors-from-the-farmers-in-blitar-indonesia
#8
JOURNAL ARTICLE
Aswin Rafif Khairullah, Shendy Canadya Kurniawan, Sri Agus Sudjarwo, Mustofa Helmi Effendi, Agus Widodo, Ikechukwu Benjamin Moses, Abdullah Hasib, Reichan Lisa Az Zahra, Maria Aega Gelolodo, Dyah Ayu Kurniawati, Katty Hendriana Priscilia Riwu, Otto Sahat Martua Silaen, Daniah Ashri Afnani, Sancaka Cashyer Ramandinianto
BACKGROUND AND AIM: There are numerous reports of subclinical mastitis cases in Blitar, which is consistent with the region's high milk production and dairy cattle population. Staphylococcus aureus , which is often the cause of mastitis cases, is widely known because of its multidrug-resistant properties and resistance to β-lactam antibiotic class, especially the methicillin-resistant S. aureus (MRSA) strains. This study aimed to molecular detection and sequence analysis of the mecA gene in milk and farmer's hand swabs to show that dairy cattle are reservoirs of MRSA strains...
January 2024: Veterinary World
https://read.qxmd.com/read/38400922/the-influence-of-biological-relatedness-on-sexual-dimorphism-and-sex-classification-based-on-external-morphology-of-the-frontal-bone
#9
JOURNAL ARTICLE
Markéta Hamanová Čechová, Jan Cvrček, Ján Dupej, Jaroslav Brůžek, Jana Velemínská
The most significant sexual differences in the human skull are located in the upper third of the face (the frontal bone), which is a useful research object, mainly in combination with virtual anthropology methods. However, the influence of biological relatedness on sexual dimorphism and frontal bone variability remains unknown. This study was directed at sexual difference description and sex classification using the form and shape of the external surface of the frontal bones from a genealogically documented Central European osteological sample (nineteenth to twentieth centuries)...
February 24, 2024: International Journal of Legal Medicine
https://read.qxmd.com/read/38397213/performance-of-a-74-microhaplotype-assay-in-kinship-analyses
#10
JOURNAL ARTICLE
Carmen Tomas, Pedro Rodrigues, Carina G Jønck, Zohal Barekzay, Halimureti Simayijiang, Vania Pereira, Claus Børsting
Microhaplotypes (MHs) consisting of multiple SNPs and indels on short stretches of DNA are new and interesting loci for forensic genetic investigations. In this study, we analysed 74 previously defined MHs in two of the populations that our laboratory provides with forensic genetic services, Danes and Greenlanders. In addition to the 229 SNPs that originally made up the 74 MHs, 66 SNPs and 3 indels were identified in the two populations, and 45 of these variants were included in new definitions of the MHs, whereas 24 SNPs were considered rare and of little value for case work...
February 10, 2024: Genes
https://read.qxmd.com/read/38397140/utilizing-massively-parallel-sequencing-mps-of-human-leukocyte-antigen-hla-gene-polymorphism-to-assess-relatedness-in-deficiency-parentage-testing
#11
JOURNAL ARTICLE
Diamanto I Kouniaki, Konstantinos V Fotopoulos, Katerina Tarassi, Alexandra Tsirogianni
In the realm of DNA testing with legal implications, the reliability and precision of genetic markers play a pivotal role in confirming or negating paternity claims. This study aimed to assess the potential utility of human leukocyte antigen (HLA) gene polymorphism through massively parallel sequencing (MPS) technology as robust forensic markers for parentage testing involving genetic deficiencies. It sought to redefine the significance of HLA genes in this context. Data on autosomal short tandem repeat (aSTR) mutational events across 18 paternity cases involving 16 commonly employed microsatellite loci were presented...
January 24, 2024: Genes
https://read.qxmd.com/read/38384715/an-approach-to-unified-formulae-for-likelihood-ratio-calculation-in-pairwise-kinship-analysis
#12
JOURNAL ARTICLE
Guanju Ma, Qian Wang, Bin Cong, Shujin Li
Introduction: The likelihood ratio (LR) can be an efficient means of distinguishing various relationships in forensic fields. However, traditional list-based methods for derivation and presentation of LRs in distant or complex relationships hinder code editing and software programming. This paper proposes an approach for a unified formula for LRs, in which differences in participants' genotype combinations can be ignored for specific identification. This formula could reduce the difficulty of by-hand coding, as well as running time of large-sample-size simulation...
2024: Frontiers in Genetics
https://read.qxmd.com/read/38382248/the-missing-person-problem-through-the-lens-of-information-theory
#13
JOURNAL ARTICLE
Franco Marsico, Gustavo Sibilla, Ma Soledad Escobar, Ariel Chernomoretz
Missing person cases typically require a genetic kinship test to determine the relationship between an unidentified individual and the relatives of the missing person. When not enough genetic evidence has been collected the lack of statistical power of these tests might lead to unreliable results. This is particularly true when just a few distant relatives are available for genotyping. In this contribution, we considered a Bayesian network approach for kinship testing and proposed several information theoretic metrics in order to quantitatively evaluate the information content of pedigrees...
February 19, 2024: Forensic Science International. Genetics
https://read.qxmd.com/read/38361438/sex-specific-effects-of-inbreeding-in-juvenile-brown-trout
#14
JOURNAL ARTICLE
Jonas Bylemans, Lucas Marques da Cunha, Sonia Sarmiento Cabello, David Nusbaumer, Anshu Uppal, Claus Wedekind
Inbreeding depression, that is, the reduction of health and vigour in individuals with high inbreeding coefficients, is expected to increase with environmental, social, or physiological stress. It has therefore been predicted that sexual selection and the associated stress usually lead to higher inbreeding depression in males than in females. However, sex-specific differences in life history may reverse that pattern during certain developmental stages. In some salmonids, for example, female juveniles start developing their gonads earlier than males who instead grow faster...
February 15, 2024: Molecular Ecology
https://read.qxmd.com/read/38347317/identification-of-the-efficacy-of-parentage-testing-based-on-bi-allelic-autosomal-single-nucleotide-polymorphism-markers-in-taiwanese-population
#15
JOURNAL ARTICLE
Yu-Chia Chen, Wei-De Lin, Ting-Yuan Liu, Fuu-Jen Tsai
Parentage testing is crucial for forensic DNA analysis, using short tandem repeats (STRs). Single nucleotide polymorphisms (SNPs) with high minor allele frequency (MAF) are promising for human identification. This study aimed to develop SNP markers for parentage testing in the Taiwanese population and compare their accuracy with STRs. The TPMv1 SNP microarray (714,457 SNPs) was used to screen 180,000 Taiwanese individuals and analyze the SNP data using PLINK. After quality control, allelic distribution, and MAF considerations, a set of SNPs with significant inheritance information was selected...
February 12, 2024: Forensic Science, Medicine, and Pathology
https://read.qxmd.com/read/38341185/using-exploratory-structural-equation-modeling-to-examine-caregiver-distress-and-its-contributors
#16
JOURNAL ARTICLE
Wenshan Li, Douglas G Manuel, Sarina R Isenberg, Peter Tanuseputro
OBJECTIVES: To develop and test the direct and indirect associations between caregiver distress and its many contributing factors and covariates. DESIGN: Analysis using data from a national, cross-sectional survey of Canadian caregivers. SETTING AND PARTICIPANTS: A total of 6502 respondents of the 2012 General Social Survey-Caregiving and Care-receiving who self-identified as a caregiver. METHODS: We used exploratory structural equation modeling to achieve our aims...
February 7, 2024: Journal of the American Medical Directors Association
https://read.qxmd.com/read/38327832/evaluation-and-identification-of-powdery-mildew-resistant-genes-in-137-wheat-relatives
#17
JOURNAL ARTICLE
Jiaojiao Wang, Hongxing Xu, Yanmin Qie, Ran Han, Xiaohui Sun, Ya Zhao, Bei Xiao, Zejun Qian, Xiaomei Huang, Ruishan Liu, Jiadong Zhang, Cheng Liu, Yuli Jin, Pengtao Ma
Powdery mildew is one of the most severe diseases affecting wheat yield and quality and is caused by Blumeria graminis f. sp. tritici ( Bgt ). Host resistance is the preferred strategy to prevent this disease. However, the narrow genetic basis of common wheat has increased the demand for diversified germplasm resources against powdery mildew. Wheat relatives, especially the secondary gene pool of common wheat, are important gene donors in the genetic improvement of common wheat because of its abundant genetic variation and close kinship with wheat...
2024: Frontiers in Genetics
https://read.qxmd.com/read/38317659/forensic-analysis-and-sequence-variation-of-133-strs-in-the-hakka-population
#18
JOURNAL ARTICLE
Yuhang Feng, Yutao Zhao, Xiaoyu Lu, Haiyan Li, Kai Zhao, Meisen Shi, Shaoqing Wen
Introduction: Short Tandem Repeats (STRs) are highly valuable genetic markers in forensic science. However, the conventional PCR-CE technique has limitations, and the emergence of massively parallel sequencing (MPS) technology presents new opportunities for STR analysis. Yet, there is limited research on Chinese population diversity using MPS. Methods: In this study, we obtained genotype data for 52 A-STRs and 81 Y-STRs from the Hakka population in Meizhou, Guangdong, China, using the Forensic Analysis System Multiplecues SetB Kit on the MGISEQ-2000 platform...
2024: Frontiers in Genetics
https://read.qxmd.com/read/38317324/gene-based-association-tests-in-family-samples-using-gwas-summary-statistics
#19
JOURNAL ARTICLE
Peng Wang, Xiao Xu, Ming Li, Xiang-Yang Lou, Siqi Xu, Baolin Wu, Guimin Gao, Ping Yin, Nianjun Liu
Genome-wide association studies (GWAS) have led to rapid growth in detecting genetic variants associated with various phenotypes. Owing to a great number of publicly accessible GWAS summary statistics, and the difficulty in obtaining individual-level genotype data, many existing gene-based association tests have been adapted to require only GWAS summary statistics rather than individual-level data. However, these association tests are restricted to unrelated individuals and thus do not apply to family samples directly...
February 5, 2024: Genetic Epidemiology
https://read.qxmd.com/read/38244605/the-slave-trade-and-the-origins-of-matrilineal-kinship
#20
JOURNAL ARTICLE
Sara Lowes, Nathan Nunn
Matrilineal kinship systems-where descent is traced through mothers only-are present all over the world but are most concentrated in sub-Saharan Africa. We explore the relationship between exposure to Africa's external slave trades, during which millions of people were shipped from the continent during a 400-year period, and the evolution of matrilineal kinship. Scholars have hypothesized that matrilineal kinship, which is well-suited to incorporating new members, maintaining lineage continuity and insulating children from the removal of parents (particularly fathers), was an adaptive response to the slave trades...
March 11, 2024: Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences
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