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Root cause analysis

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https://www.readbyqxmd.com/read/28238658/role-of-lotr1-in-nutrient-transport-through-organization-of-spatial-distribution-of-root-endodermal-barriers
#1
Baohai Li, Takehiro Kamiya, Lothar Kalmbach, Mutsumi Yamagami, Katsushi Yamaguchi, Shuji Shigenobu, Shinichiro Sawa, John M C Danku, David E Salt, Niko Geldner, Toru Fujiwara
The formation of Casparian strips and suberin lamellae at the endodermis limits the free diffusion of nutrients and harmful substances via the apoplastic space between the soil solution and the stele in roots [1-3]. Casparian strips are ring-like lignin polymers deposited in the middle of anticlinal cell walls between endodermal cells and fill the gap between them [4-6]. Suberin lamellae are glycerolipid polymers covering the endodermal cells and likely function as a barrier to limit transmembrane movement of apoplastic solutes into the endodermal cells [7, 8]...
February 21, 2017: Current Biology: CB
https://www.readbyqxmd.com/read/28235406/network-topology-of-nav1-7-mutations-in-sodium-channel-related-painful-disorders
#2
Dimos Kapetis, Jenny Sassone, Yang Yang, Barbara Galbardi, Markos N Xenakis, Ronald L Westra, Radek Szklarczyk, Patrick Lindsey, Catharina G Faber, Monique Gerrits, Ingemar S J Merkies, Sulayman D Dib-Hajj, Massimo Mantegazza, Stephen G Waxman, Giuseppe Lauria
BACKGROUND: Gain-of-function mutations in SCN9A gene that encodes the voltage-gated sodium channel NaV1.7 have been associated with a wide spectrum of painful syndromes in humans including inherited erythromelalgia, paroxysmal extreme pain disorder and small fibre neuropathy. These mutations change the biophysical properties of NaV1.7 channels leading to hyperexcitability of dorsal root ganglion nociceptors and pain symptoms. There is a need for better understanding of how gain-of-function mutations alter the atomic structure of Nav1...
February 24, 2017: BMC Systems Biology
https://www.readbyqxmd.com/read/28230577/suicide-and-suicide-attempts-on-hospital-grounds-and-clinic-areas
#3
Peter D Mills, Bradley V Watts, Robin R Hemphill
OBJECTIVES: The goal of this study was to describe suicide and suicide attempts that occurred while the patient was on hospital grounds, common spaces, and clinic areas using root cause analysis (RCA) reports of these events in a national health care organization in the United States. METHOD: This is an observational review of all RCA reports of suicide and suicide attempts on hospital grounds, common spaces, and clinic areas in our system between December 1, 1999, and December 31, 2014...
February 22, 2017: Journal of Patient Safety
https://www.readbyqxmd.com/read/28228477/pain-objectivity-and-history-understanding-pain-stigma
#4
Daniel S Goldberg
The primary claim of this paper is that understanding the stigma so commonly endured by chronic pain sufferers today in the USA and the UK is unlikely without proper appreciation of the history of pain. Ameliorating such stigma is an ethical imperative, and yet most approaches eschew even an attempt to trace connections between historical attitudes, practices and beliefs towards pain and the stigmatisation so many pain sufferers currently endure. The manuscript aims to help fill this gap by framing pain in the modern era in context of two crucial intellectual schemes that waxed in the 19th and 20th centuries: mechanical objectivity and somaticism...
February 21, 2017: Medical Humanities
https://www.readbyqxmd.com/read/28228469/root-cause-analysis-swatting-at-mosquitoes-versus-draining-the-swamp
#5
EDITORIAL
Patricia Trbovich, Kaveh G Shojania
No abstract text is available yet for this article.
February 21, 2017: BMJ Quality & Safety
https://www.readbyqxmd.com/read/28227309/an-analysis-of-sounds-for-lungs-with-excessive-water
#6
Kah Jun Hong, Wee Ser, David Chee-Guan Foo, Kah Jun Hong, Wee Ser, David Chee-Guan Foo, Wee Ser, Kah Jun Hong, David Chee-Guan Foo
Excessive lung water occurs when too much water accumulates in the lung, causing breathing difficulty. Current diagnosis methods include X-rays and CT-scans. However, because of their bulk and the need for trained professionals to operate, physicians rely on auscultation for preliminary diagnosis. Recent attempts have been made to automate the auscultation process and some degree of success has been reported. Thus, it would be useful to provide more analysis of such lung sounds. This paper attempts to study the characteristics of breathing sounds from lungs with excessive water and compare them with breathing sounds from healthy lungs...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28225364/preoperative-risk-factors-of-c5-nerve-root-palsy-after-laminectomy-and-fusion-in-patients-with-cervical-myelopathy-analysis-of-70-consecutive-patients
#7
Kyung-Soo Suk, Kyung-Chung Kang, Hak-Sun Kim, Seong-Hwan Moon, Hwan-Mo Lee, Jung-Ho Seo, Sung-Min Kim, Sung-Yub Jin, Pierre Mella
STUDY DESIGN: A retrospective study. OBJECTIVE: To identify preoperative risk factors causing cervical fifth nerve root palsy (C5 palsy) after laminectomy and fusion (LF). SUMMARY OF BACKGROUND DATA: It is well known that postoperative C5 palsy is not rare after cervical surgery. Although there remains controversy, C5 palsy is considered to be more common in patients who had LF than in those who had laminoplasty. However, the reason for the higher incidence of C5 palsy in patients with LF has been poorly understood...
February 20, 2017: Clinical Spine Surgery
https://www.readbyqxmd.com/read/28220869/nitric-oxide-is-involved-in-the-oxytetracycline-induced-suppression-of-root-growth-through-inhibiting-hydrogen-peroxide-accumulation-in-the-root-meristem
#8
Qing-Xiang Yu, Golam Jalal Ahammed, Yan-Hong Zhou, Kai Shi, Jie Zhou, Yunlong Yu, Jing-Quan Yu, Xiao-Jian Xia
Use of antibiotic-contaminated manure in crop production poses a severe threat to soil and plant health. However, few studies have studied the mechanism by which plant development is affected by antibiotics. Here, we used microscopy, flow cytometry, gene expression analysis and fluorescent dyes to study the effects of oxytetracycline (OTC), a widely used antibiotic in agriculture, on root meristem activity and the accumulation of hydrogen peroxide (H2O2) and nitric oxide (NO) in the root tips of tomato seedlings...
February 21, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28220136/novel-sources-of-witchweed-striga-resistance-from-wild-sorghum-accessions
#9
Dorothy A Mbuvi, Clet W Masiga, Eric Kuria, Joel Masanga, Mark Wamalwa, Abdallah Mohamed, Damaris A Odeny, Nada Hamza, Michael P Timko, Steven Runo
Sorghum is a major food staple in sub-Saharan Africa (SSA), but its production is constrained by the parasitic plant Striga that attaches to the roots of many cereals crops and causes severe stunting and loss of yield. Away from cultivated farmland, wild sorghum accessions grow as weedy plants and have shown remarkable immunity to Striga. We sought to determine the extent of the resistance to Striga in wild sorghum plants. Our screening strategy involved controlled laboratory assays of rhizotrons, where we artificially infected sorghum with Striga, as well as field experiments at three sites, where we grew sorghum with a natural Striga infestation...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28217134/proteasome-activity-profiling-uncovers-alteration-of-catalytic-%C3%AE-2-and-%C3%AE-5-subunits-of-the-stress-induced-proteasome-during-salinity-stress-in-tomato-roots
#10
Judit Kovács, Péter Poór, Farnusch Kaschani, Balakumaran Chandrasekar, Tram N Hong, Johana C Misas-Villamil, Bo T Xin, Markus Kaiser, Herman S Overkleeft, Irma Tari, Renier A L van der Hoorn
The stress proteasome in the animal kingdom facilitates faster conversion of oxidized proteins during stress conditions by incorporating different catalytic β subunits. Plants deal with similar kind of stresses and also carry multiple paralogous genes encoding for each of the three catalytic β subunits. Here, we investigated the existence of stress proteasomes upon abiotic stress (salt stress) in tomato roots. In contrast to Arabidopsis thaliana, tomato has a simplified proteasome gene set with single genes encoding each β subunit except for two genes encoding β2...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28212098/a-2-5-mw-ch-50-mcps-10-analog-channel-adaptively-biased-read-out-front-end-ic-with-low-intrinsic-timing-resolution-for-single-photon-time-of-flight-pet-applications-with-time-dependent-noise-analysis-in-90-nm-cmos
#11
Hugo Cruz, Hong-Yi Huang, Ching-Hsing Luo, Shuenn-Yuh Lee
This paper presents a 10-channel time-of-flight application-specific integrated circuit (ASIC) for positron emission tomography in a 90 nm standard CMOS process. To overcome variations in channel-to-channel timing resolution caused by mismatch and process variations, adaptive biases and a digital-to-analog converter (DAC) are utilized. The main contributions of this work are as follows. First, multistage architectures reduce the total power consumption, and detection bandwidths of analog preamplifiers and comparators are increased to 1 and 1...
February 13, 2017: IEEE Transactions on Biomedical Circuits and Systems
https://www.readbyqxmd.com/read/28211737/poynting-robertson-like-drag-at-the-sun-s-surface
#12
Ian Cunnyngham, Marcelo Emilio, Jeff Kuhn, Isabelle Scholl, Rock Bush
The Sun's internal rotation Ω(r,Θ) has previously been measured using helioseismology techniques and found to be a complex function of colatitude θ and radius r. From helioseismology and observations of apparently "rooted" solar magnetic tracers, we know that the surface rotates more slowly than much of the interior. The cause of this slow-down is not understood, but it is important for understanding stellar rotation generally and any plausible theory of the solar interior. A new analysis using 5-min solar p-mode limb oscillations as a rotation "tracer" finds an even larger velocity gradient in a thin region at the top of the photosphere...
February 3, 2017: Physical Review Letters
https://www.readbyqxmd.com/read/28210351/cross-continuum-tool-is-associated-with-reduced-utilization-and-cost-for-frequent-high-need-users
#13
Lauran Hardin, Adam Kilian, Leslie Muller, Kevin Callison, Michael Olgren
INTRODUCTION: High-need, high-cost (HNHC) patients can over-use acute care services, a pattern of behavior associated with many poor outcomes that disproportionately contributes to increased U.S. healthcare cost. Our objective was to reduce healthcare cost and improve outcomes by optimizing the system of care. We targeted HNHC patients and identified root causes of frequent healthcare utilization. We developed a cross-continuum intervention process and a succinct tool called a Complex Care Map (CCM)© that addresses fragmentation in the system and links providers to a comprehensive individualized analysis of the patient story and causes for frequent access to health services...
February 2017: Western Journal of Emergency Medicine
https://www.readbyqxmd.com/read/28204849/effects-of-impacted-maxillary-canines-on-root-resorption-of-lateral-incisors-a-cone-beam-computed-tomography-study
#14
Faruk I Ucar, Ahmet A Celebi, Enes Tan, Tolga Topcuoğlu, Ahmet Ercan Sekerci
OBJECTIVES: The aim of this study was to analyze the amount of root resorption of maxillary lateral incisors by relating the position, location, and angulation of the impacted canine using cone-beam computed tomography (CBCT). MATERIALS AND METHODS: The study sample consisted of panoramic and CBCT radiographs of 46 patients with a unilateral impacted canine (16 males and 30 females; mean age: 19.53 ± 6.66 and 19.44 ± 5.77 years, respectively). Sector location and canine angulation were measured in panoramics...
February 15, 2017: Journal of Orofacial Orthopedics, Fortschritte der Kieferorthopädie
https://www.readbyqxmd.com/read/28203245/small-rnas-derived-from-the-t-dna-of-agrobacterium-rhizogenes-in-hairy-roots-of-phaseolus-vulgaris
#15
Pablo Peláez, Alejandrina Hernández-López, Georgina Estrada-Navarrete, Federico Sanchez
Agrobacterium rhizogenes is a pathogenic bacteria that causes hairy root disease by transferring bacterial DNA into the plant genome. It is an essential tool for industry and research due to its capacity to produce genetically modified roots and whole organisms. Here, we identified and characterized small RNAs generated from the transfer DNA (T-DNA) of A. rhizogenes in hairy roots of common bean (Phaseolus vulgaris). Distinct abundant A. rhizogenes T-DNA-derived small RNAs (ArT-sRNAs) belonging to several oncogenes were detected in hairy roots using high-throughput sequencing...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28193158/transcriptional-and-physiological-analyses-of-fe-deficiency-response-in-maize-reveal-the-presence-of-strategy-i-components-and-fe-p-interactions
#16
Laura Zanin, Silvia Venuti, Anita Zamboni, Zeno Varanini, Nicola Tomasi, Roberto Pinton
BACKGROUND: Under limited iron (Fe) availability maize, a Strategy II plant, improves Fe acquisition through the release of phytosiderophores (PS) into the rhizosphere and the subsequent uptake of Fe-PS complexes into root cells. Occurrence of Strategy-I-like components and interactions with phosphorous (P) nutrition has been hypothesized based on molecular and physiological studies in grasses. RESULTS: In this report transcriptomic analysis (NimbleGen microarray) of Fe deficiency response revealed that maize roots modulated the expression levels of 724 genes (508 up- and 216 down-regulated, respectively)...
February 13, 2017: BMC Genomics
https://www.readbyqxmd.com/read/28188207/use-of-endophytic-and-rhizosphere-bacteria-to-improve-phytoremediation-of-arsenic-contaminated-industrial-soils-by-autochthonous-betula-celtiberica
#17
Victoria Mesa, Alejandro Navazas, Ricardo González-Gil, Aida González, Nele Weyens, Béatrice Lauga, Jose Luis R Gallego, Jesús Sánchez, Ana Isabel Peláez
The aim of the study was to investigate the potential of indigenous arsenic-tolerant bacteria to enhance arsenic phytoremediation by autochthonous pseudometallophyte Betula celtiberica The first goal was to perform an initial analysis of the entire rhizosphere and endophytic bacterial communities of the above-named accumulator plant, including the cultivable bacterial species. B. celtiberica's microbiome was dominated by taxa related to Flavobacteriales, Burkholderiales, and Pseudomonadales, specially the Pseudomonas and Flavobacterium genera...
February 10, 2017: Applied and Environmental Microbiology
https://www.readbyqxmd.com/read/28187376/genome-wide-analysis-of-excretory-secretory-proteins-in-root-knot-nematode-meloidogyne-incognita-provides-potential-targets-for-parasite-control
#18
Shachi Gahoi, Budhayash Gautam
The root-knot nematode, Meloidogyne incognita causes significant damage to various economically important crops. Infection is associated with secretion of effector proteins into host cytoplasm and interference with host innate immunity. To combat this infection, the identification and functional annotations of Excretory/Secretory (ES) proteins serve as a key to produce durable control measures. The identification of ES proteins through experimental methods are expensive and time consuming while bioinformatics approaches are cost-effective by prioritizing the experimental analysis of potential drug targets for parasitic diseases...
February 1, 2017: Computational Biology and Chemistry
https://www.readbyqxmd.com/read/28178930/the-5as-team-patient-study-patient-perspectives-on-the-role-of-primary-care-in-obesity-management
#19
Jacqueline Torti, Thea Luig, Michelle Borowitz, Jeffrey A Johnson, Arya M Sharma, Denise L Campbell-Scherer
BACKGROUND: Over 60% of people have overweight or obesity, but only a third report receiving counselling from primary care providers. We explored patients' perspectives on the role of primary care in obesity management and their experience with existing resources, with a view to develop an improved understanding of this perspective, and more effective management strategies. METHODS: Qualitative study employing semi-structured interviews and thematic analysis, with a sample of 28 patients from a cohort of 255 patients living with obesity and receiving care to support their weight management in a large Primary Care Network of family practices in Alberta...
February 8, 2017: BMC Family Practice
https://www.readbyqxmd.com/read/28178866/a-sociocultural-approach-to-children-s-perceptions-of-death-and-loss
#20
Sungeun Yang, Soyeon Park
By employing the phenomenographic approach, the present study explored children's cognitive understanding of and emotional responses to death and bereavement. Participants included 52 Korean, 16 Chinese, and 16 Chinese American children ages 5-6. Thematic analysis of children's drawings and open-ended interviews revealed that most children associated death with negative emotions such as fear, anxiety, and sadness. The majority of children used realistic expressions to narrate death. The core themes from their drawings included causes for death, attempts to stop the dying, and situations after death...
January 1, 2017: Omega
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