keyword
https://read.qxmd.com/read/38600668/dsnetax-a-deep-learning-species-annotation-method-based-on-a-deep-shallow-parallel-framework
#21
JOURNAL ARTICLE
Hongyuan Zhao, Suyi Zhang, Hui Qin, Xiaogang Liu, Dongna Ma, Xiao Han, Jian Mao, Shuangping Liu
Microbial community analysis is an important field to study the composition and function of microbial communities. Microbial species annotation is crucial to revealing microorganisms' complex ecological functions in environmental, ecological and host interactions. Currently, widely used methods can suffer from issues such as inaccurate species-level annotations and time and memory constraints, and as sequencing technology advances and sequencing costs decline, microbial species annotation methods with higher quality classification effectiveness become critical...
March 27, 2024: Briefings in Bioinformatics
https://read.qxmd.com/read/38600164/a-membrane-associated-tandem-kinase-from-wild-emmer-wheat-confers-broad-spectrum-resistance-to-powdery-mildew
#22
JOURNAL ARTICLE
Miaomiao Li, Huaizhi Zhang, Huixin Xiao, Keyu Zhu, Wenqi Shi, Dong Zhang, Yong Wang, Lijun Yang, Qiuhong Wu, Jingzhong Xie, Yongxing Chen, Dan Qiu, Guanghao Guo, Ping Lu, Beibei Li, Lei Dong, Wenling Li, Xuejia Cui, Lingchuan Li, Xiubin Tian, Chengguo Yuan, Yiwen Li, Dazhao Yu, Eviatar Nevo, Tzion Fahima, Hongjie Li, Lingli Dong, Yusheng Zhao, Zhiyong Liu
Crop wild relatives offer natural variations of disease resistance for crop improvement. Here, we report the isolation of broad-spectrum powdery mildew resistance gene Pm36, originated from wild emmer wheat, that encodes a tandem kinase with a transmembrane domain (WTK7-TM) through the combination of map-based cloning, PacBio SMRT long-read genome sequencing, mutagenesis, and transformation. Mutagenesis assay reveals that the two kinase domains and the transmembrane domain of WTK7-TM are critical for the powdery mildew resistance function...
April 10, 2024: Nature Communications
https://read.qxmd.com/read/38595182/understanding-preferences-for-receiving-health-communications-and-information-about-clinical-trials-a-cross-sectional-study-among-us-adults
#23
JOURNAL ARTICLE
Dalia Majumdar, Diane Webb, Stephanie Parsons, Elizabeth M Selwan-Lewis, Trisha Rettig, Emily Chastain, Winifred Obanor, Rob Birnberg, Amy Kuang
OBJECTIVE: Effective health communication is critical for understanding and acting on health information. This cross-sectional study explored participants' understanding of their health condition, their preferences for receiving health communications, and their interest in receiving clinical trial results across several therapeutic areas. METHODS: The study recruited participants via social media, email newsletters, and advocacy organizations. An online screener captured demographic information (health conditions, age, race/ethnicity, gender, and education)...
April 10, 2024: Current Medical Research and Opinion
https://read.qxmd.com/read/38590046/strategies-for-nursing-care-of-critically-ill-multicultural-patients-a-scoping-review
#24
REVIEW
Loredana Mihu, Rita Margarida Dourado Marques, Patrícia Pontifice Sousa
BACKGROUND: In society, people live in a social reality where multiculturalism is an increasingly relevant and prevalent topic in their contexts. Facing this, caring for multicultural patients in an emergency service or intensive care unit setting requires a high level of cultural competence due to the complexity, vulnerability of the patient, rapid changes in hemodynamic status, involvement of the family, their informational needs. OBJECTIVE: To map the strategies for nursing care of critically ill multicultural patients...
April 8, 2024: Journal of Clinical Nursing
https://read.qxmd.com/read/38589897/the-use-of-positive-deviance-approach-to-improve-health-service-delivery-and-quality-of-care-a-scoping-review
#25
REVIEW
Ayelign Mengesha Kassie, Elizabeth Eakin, Biruk Beletew Abate, Aklilu Endalamaw, Anteneh Zewdie, Eskinder Wolka, Yibeltal Assefa
BACKGROUND: Quality has been a persistent challenge in the healthcare system, particularly in resource-limited settings. As a result, the utilization of innovative approaches is required to help countries in their efforts to enhance the quality of healthcare. The positive deviance (PD) approach is an innovative approach that can be utilized to improve healthcare quality. The approach assumes that solutions to problems are already available within the community and identifying and sharing those solutions can help others to resolve existing issues...
April 8, 2024: BMC Health Services Research
https://read.qxmd.com/read/38588719/twelve-tips-for-developing-and-implementing-an-effective-critical-care-simulation-programme
#26
JOURNAL ARTICLE
Aidan T O'Dowd, Natalie L McEvoy, Christopher Read, Dara O'Keeffe, Gerard F Curley
Simulation training in healthcare settings has become a valuable training tool. It provides an ideal formative assessment for interdisciplinary teaching. It provides a high fidelity and highly immersive environment where healthcare staff and students can practice developing their skills in a safe and controlled manner. Simulation training allows staff to practice skills that better prepare them for clinical emergencies, therefore possibly optimising clinical care. While the benefits of simulation education are well understood, establishing a programme for use by critical care staff is complex...
April 8, 2024: Medical Teacher
https://read.qxmd.com/read/38583880/parent-perceptions-of-school-meals-influence-student-participation-in-school-meal-programs
#27
JOURNAL ARTICLE
Monica D Zuercher, Juliana F W Cohen, Christina A Hecht, Kenneth Hecht, Dania Orta-Aleman, Anisha Patel, Deborah A Olarte, Leah E Chapman, Margaret Read, Marlene B Schwartz, Lorrene D Ritchie, Wendi Gosliner
OBJECTIVE: To evaluate if parent perceptions of school meals influence student participation. DESIGN: In May 2022, an online survey was used to evaluate parents' perceptions of school meals and their children's participation. PARTICIPANTS: A total of 1,110 California parents of kindergarten through 12th-grade students. MAIN OUTCOME MEASURES: Student participation in school lunch and breakfast. ANALYSIS: Principal component analysis and Poisson regression models...
April 2024: Journal of Nutrition Education and Behavior
https://read.qxmd.com/read/38582598/tyrosine-hydroxylase-plays-crucial-roles-in-larval-cuticle-formation-and-larval-pupal-tanning-in-the-rice-stem-borer-chilo-suppressalis
#28
JOURNAL ARTICLE
Qing-Yu Xu, Zhi-Ling Zhang, Ru Zhang, Ary A Hoffman, Ji-Chao Fang, Guang-Hua Luo
The striped stem borer, Chilo suppressalis (Walker), a notorious pest infesting rice, has evolved a high level of resistance to many commonly used insecticides. In this study, we investigate whether tyrosine hydroxylase (TH), which is required for larval development and cuticle tanning in many insects, could be a potential target for the control of C. suppressalis. We identified and characterized the full-length cDNA (CsTH) of C. suppressalis. The complete open reading frame of CsTH (MW690914) was 1683 bp in length, encoding a protein of 560 amino acids...
March 2024: Pesticide Biochemistry and Physiology
https://read.qxmd.com/read/38581842/efficacy-and-safety-of-sitagliptin-with-basal-plus-insulin-regimen-versus-insulin-alone-in-non-critically-ill-hospitalized-patients-with-type-2-diabetes-sita-plus-hospital-trial
#29
JOURNAL ARTICLE
Abraham Edgar Gracia-Ramos, María Del Pilar Cruz-Dominguez, Eduardo Osiris Madrigal-Santillán, Raúl Rojas-Martínez, José Antonio Morales-González, Ángel Morales-González, Mónica Hernández-Espinoza, Joaquín Vargas-Peñafiel, María de Los Ángeles Tapia-González
AIMS: To compare the efficacy and safety of basal-plus (BP) insulin regimen with or without sitagliptin in non-critically ill patients with type 2 diabetes (T2D). METHODS: This open-label, randomized clinical trial included inpatients with a previous diagnosis of T2D and blood glucose (BG) between 180 and 400 mg/dL. Participants received basal and correctional insulin doses (BP regimen) either with or without sitagliptin. The primary outcome was the difference in the mean daily BG among the groups...
April 3, 2024: Journal of Diabetes and its Complications
https://read.qxmd.com/read/38581685/spatial-architecture-of-myeloid-and-t-cells-orchestrates-immune-evasion-and-clinical-outcome-in-lung-cancer
#30
JOURNAL ARTICLE
Katey S S Enfield, Emma Colliver, Claudia S Y Lee, Alastair Magness, David A Moore, Monica Sivakumar, Kristiana Grigoriadis, Oriol Pich, Takahiro Karasaki, Philip S Hobson, Dina Levi, Selvaraju Veeriah, Clare Puttick, Emma L Nye, Mary Green, Krijn K Dijkstra, Masako Shimato, Ayse U Akarca, Teresa Marafioti, Roberto Salgado, Allan Hackshaw, TRACERx Consortium, Mariam Jamal-Hanjani, Febe van Maldegem, Nicholas McGranahan, Benjamin Glass, Hanna Pulaski, Eric Walk, James L Reading, Sergio A Quezada, Crispin T Hiley, Julian Downward, Erik Sahai, Charles Swanton, Mihaela Angelova
Understanding the role of the tumour microenvironment (TME) in lung cancer is critical to improving patient outcome. We identified four histology-independent archetype TMEs in treatment-naive early-stage lung cancer using imaging mass cytometry in the TRACERx study (n=81 patients/198 samples/2.3million cells). In immune-hot adenocarcinomas, spatial niches of T cells and macrophages increased with clonal neoantigen burden, whereas such an increase was observed for niches of plasma and B cells in immune-excluded squamous cell carcinomas (LUSC)...
April 6, 2024: Cancer Discovery
https://read.qxmd.com/read/38580355/alpha-2-agonists-for-sedation-to-produce-better-outcomes-from-critical-illness-a2b-trial-protocol-for-a-mixed-methods-process-evaluation-of-a-randomised-controlled-trial
#31
JOURNAL ARTICLE
Leanne M Aitken, Lydia M Emerson, Kalliopi Kydonaki, Bronagh Blackwood, Benedict Creagh-Brown, Nazir I Lone, Cathrine A McKenzie, Michael C Reade, Christopher J Weir, Matt P Wise, Timothy S Walsh
INTRODUCTION: An association between deep sedation and adverse short-term outcomes has been demonstrated although this evidence has been inconsistent. The A2B (alpha-2 agonists for sedation in critical care) sedation trial is designed to determine whether the alpha-2 agonists clonidine and dexmedetomidine, compared with usual care, are clinically and cost-effective. The A2B intervention is a complex intervention conducted in 39 intensive care units (ICUs) in the UK. Multicentre organisational factors, variable cultures, perceptions and practices and the involvement of multiple members of the healthcare team add to the complexity of the A2B trial...
April 5, 2024: BMJ Open
https://read.qxmd.com/read/38580100/harnessing-children-s-picture-books-to-socialize-children-about-pain-and-injury-a-qualitative-study
#32
JOURNAL ARTICLE
Sarah B Wallwork, Sue Nichols, Abbie Jordan, Melanie Noel, Victoria J Madden, G Lorimer Moseley
Pain experiences are common during childhood (e.g., 'everyday' pain, vaccine injections) and are powerful opportunities for children to learn about pain and injury. These experiences likely inform fundamental and life-long beliefs about pain. There is scant research investigating the sociocultural contexts in which children learn about pain and injury. One unexplored context is shared reading of picture books (e.g., between parents/caregivers and children). In this study, we investigated whether shared reading of picture books that included depictions of pain and/or injury prompted parent/caregiver-child interactions...
April 3, 2024: Journal of Pain
https://read.qxmd.com/read/38579977/a-novel-exoskeletal-derived-c-type-lectin-facilitates-phagocytosis-of-hemocytes-in-the-oriental-river-prawn-macrobrachium-nipponense
#33
JOURNAL ARTICLE
Juan Du, Yuanyuan Tang, Jiaye Chu, Quanli Yang, Xiaohan Qian, Yan Wan, Yuming Lu, Limin Zhang, Wenfeng Wang
C-type lectins (CTLs) execute critical functions in multiple immune responses of crustaceans as a member of pattern recognition receptors (PRRs) family. In this study, a novel CTL was identified from the exoskeleton of the oriental river prawn Macrobrachium nipponense (MnLec3). The full-length cDNA of MnLec3 was 1150 bp with an open reading frame of 723 bp, encoding 240 amino acids. MnLec3 protein contained a signal peptide and one single carbohydrate-recognition domain (CRD). MnLec3 transcripts were widely distributed at the exoskeleton all over the body...
April 3, 2024: Fish & Shellfish Immunology
https://read.qxmd.com/read/38578941/taking-a-reading-on-nhs-patient-safety-views-from-the-ombudsman
#34
JOURNAL ARTICLE
John Tingle
John Tingle , Lecturer in Law, Birmingham Law School, University of Birmingham, discusses several reports where the Parliamentary and Health Service Ombudsman addresses some critical NHS patient safety issues.
April 4, 2024: British Journal of Nursing: BJN
https://read.qxmd.com/read/38578589/transcriptomic-analysis-of-cyclamen-persicum-to-identify-invovled-genes-in-triterpene-secondary-metabolites-pathway
#35
JOURNAL ARTICLE
Zahra Hekmati, Mahmood Solouki, Abbasali Emamjomeh, Javad Zahiri, Asghar Mirzaie-Asl
Saponins are considered as a diverse group of natural active compounds, which are widely found in crops. Mevalonate pathway (MVA) is regarded as the main pathway for synthesis of saponins in crops. This study aims to compare transcriptome of the leaf with tuber of crop including tubers and roots. First, more than 166 million reads were generated. The existence of 36,678 unigenes in the two samples out of 48,936 assembled ones showed a significant difference in expression. Finally, 310 and 290 highly up-regulated genes in leaf and tuber were selected for the next analysis...
April 5, 2024: Biochemical Genetics
https://read.qxmd.com/read/38578000/formaldehyde-exposure-of-aquaculture-workers-in-korea
#36
JOURNAL ARTICLE
Woo Je Lee, Ki Youn Kim
OBJECTIVES: Korea's aquaculture sector primarily cultivates aquatic life, with fish seed production as a focus. Formalin, a parasiticide, consists of 37% formaldehyde mixed with yellow No. 4 dye. Formaldehyde vaporization poses cancer risks, classified as a carcinogen. Korea regulates formaldehyde as a hazardous substance, requiring workplace environment measurements. Few aquaculture farms have conducted these checks in recent years. In this study, we investigated actual formaldehyde exposure levels among Korean aquaculture workers, highlighting a critical safety concern...
April 5, 2024: Journal of Agromedicine
https://read.qxmd.com/read/38577700/analysis-of-the-most-popular-online-ankle-fracture-related-patient-education-materials
#37
JOURNAL ARTICLE
Haad A Arif, Gavin LeBrun, Simon T Moore, David A Friscia
BACKGROUND: Given the increasing accessibility of Internet access, it is critical to ensure that the informational material available online for patient education is both accurate and readable to promote a greater degree of health literacy. This study sought to investigate the quality and readability of the most popular online resources for ankle fractures. METHODS: After conducting a Google search using 6 terms related to ankle fractures, we collected the first 20 nonsponsored results for each term...
April 2024: Foot & ankle orthopaedics
https://read.qxmd.com/read/38576207/co-production-processes-for-translation-and-validation-of-psychosocial-assessments-for-older-adults-in-aged-care
#38
JOURNAL ARTICLE
Joyce Siette, Amy D Nguyen, Laura Dodds, Lindsey Brett, Andrew Georgiou
OBJECTIVE: Given the diverse ethnic backgrounds of aged care clients, there is a critical requirement to translate psychosocial assessment tools into various languages to effectively evaluate social engagement and quality of life in older adults receiving aged care services. This study aimed to translate psychosocial tools into Turkish, Korean and Mandarin, the primary languages spoken by clients of an Australian community aged care provider. METHODS: A co-development approach encompassing forward and backward translations of the Australian Community Participation Questionnaire and ICEpop CAPability measure for Older people tools, along with focus group discussions involving bilingual staff (n = 7) and clients (n = 16), was employed to ensure precision and cultural relevance...
April 4, 2024: Australasian Journal on Ageing
https://read.qxmd.com/read/38573721/direction-specific-reading-experience-shapes-perceptual-span
#39
JOURNAL ARTICLE
Ming Yan, Reinhold Kliegl, Jinger Pan
Perceptual span in reading, the spatial extent for effective information extraction during a single fixation, provides a critical foundation to all studies for sentence reading. However, it is not understood fully how the perceptual span is influenced by direction-specific reading experience. Traditional Chinese sentences can be written horizontally from left to right or vertically downward, offering the best opportunity to explore readers' perceptual span in different text directions, free of possible confounding with language proficiency and cross-participant differences...
April 4, 2024: Journal of Experimental Psychology. Learning, Memory, and Cognition
https://read.qxmd.com/read/38572080/effect-of-level-of-sedation-on-outcomes-in-critically-ill-adult-patients-a-systematic-review-of-clinical-trials-with-meta-analysis-and-trial-sequential-analysis
#40
JOURNAL ARTICLE
Ameldina Ceric, Johan Holgersson, Teresa L May, Markus B Skrifvars, Johanna Hästbacka, Manoj Saxena, Anders Aneman, Anthony Delaney, Michael C Reade, Candice Delcourt, Janus Christian Jakobsen, Niklas Nielsen
BACKGROUND: Sedation is routinely administered to critically ill patients to alleviate anxiety, discomfort, and patient-ventilator asynchrony. However, it must be balanced against risks such as delirium and prolonged intensive care stays. This study aimed to investigate the effects of different levels of sedation in critically ill adults. METHODS: Systematic review with meta-analysis and trial sequential analysis (TSA) of randomised clinical trials including critically ill adults admitted to the intensive care unit...
May 2024: EClinicalMedicine
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