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https://www.readbyqxmd.com/read/28334204/transcriptomic-and-histological-responses-of-african-rice-oryza-glaberrima-to-meloidogyne-graminicola-provide-new-insights-into-root-knot-nematode-resistance-in-monocots
#1
Anne-Sophie Petitot, Tina Kyndt, Rana Haidar, Alexis Dereeper, Myriam Collin, Janice de Almeida Engler, Godelieve Gheysen, Diana Fernandez
Background and Aims: The root-knot nematode Meloidogyne graminicola is responsible for production losses in rice ( Oryza sativa ) in Asia and Latin America. The accession TOG5681 of African rice, O. glaberrima , presents improved resistance to several biotic and abiotic factors, including nematodes. The aim of this study was to assess the cytological and molecular mechanisms underlying nematode resistance in this accession. Methods: Penetration and development in M...
February 28, 2017: Annals of Botany
https://www.readbyqxmd.com/read/28332623/identification-and-characterization-of-the-abscisic-acid-aba-receptor-gene-family-and-its-expression-in-response-to-hormones-in-the-rubber-tree
#2
Dong Guo, Ying Zhou, Hui-Liang Li, Jia-Hong Zhu, Ying Wang, Xiong-Ting Chen, Shi-Qing Peng
Abscisic acid (ABA) is an essential phytohormone involved in diverse physiological processes. Although genome-wide analyses of the ABA receptor PYR/PYL/RCAR (PYL) protein/gene family have been performed in certain plant species, little is known about the ABA receptor protein/gene family in the rubber tree (Hevea brasiliensis). In this study, we identified 14 ABA receptor PYL proteins/genes (designated HbPYL1 through HbPYL14) in the most recent rubber tree genome. A phylogenetic tree was constructed, which demonstrated that HbPYLs can be divided into three subfamilies that correlate well with the corresponding Arabidopsis subfamilies...
March 23, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28331096/comprehensive-transcriptome-analyses-reveal-that-potato-spindle-tuber-viroid-triggers-genome-wide-changes-in-alternative-splicing-inducible-trans-acting-activity-of-phasirnas-and-immune-responses
#3
Yi Zheng, Ying Wang, Biao Ding, Zhangjun Fei
Many pathogens express non-coding RNAs (ncRNAs) during infection processes. In the most extreme case, pathogenic ncRNAs alone (such as viroids) can infect eukaryotic organisms leading to diseases. While a few of pathogenic ncRNAs have been implicated in regulating gene expression, functions of most pathogenic ncRNAs in host-pathogen interactions remain unclear. Here we employ potato spindle tuber viroid (PSTVd)-infecting tomato as a system to dissect host interactions with pathogenic ncRNAs, using comprehensive transcriptome analyses...
March 22, 2017: Journal of Virology
https://www.readbyqxmd.com/read/28330935/the-role-of-enhanced-responses-to-aba1-era1-in-arabidopsis-stomatal-responses-is-beyond-aba-signaling
#4
Pirko Jalakas, Yi-Chun Huang, Yu-Hung Yeh, Laurent Zimmerli, Ebe Merilo, Hannes Kollist, Mikael Brosche
Proper stomatal responses are essential for plant function in an altered environment. The core signaling pathway for abscisic acid (ABA)-induced stomatal closure involves perception of the hormone that leads to the activation of guard cell anion channels by the protein kinase OPEN STOMATA1 (OST1). Several other regulators are suggested to modulate the ABA signaling pathway, including the protein ENHANCED RESPONSE TO ABA 1 (ERA1), that encodes the farnesyl transferase beta subunit. The era1 mutant is hypersensitive to ABA during seed germination and shows a more closed stomata phenotype...
March 22, 2017: Plant Physiology
https://www.readbyqxmd.com/read/28330565/phytohormone-profiling-in-relation-to-osmotic-adjustment-in-nacl-treated-plants-of-the-halophyte-tomato-wild-relative-species-solanum-chilense-comparatively-to-the-cultivated-glycophyte-solanum-lycopersicum
#5
Emna Gharbi, Juan-Pablo Martínez, Hela Benahmed, Imène Hichri, Petre I Dobrev, Václav Motyka, Muriel Quinet, Stanley Lutts
A holistic approach was used to investigate the hormonal profile in relation with osmotic adjustment under salinity in Solanum lycopersicum and its halophyte wild relative Solanum chilense. Plants were subjected to 125mM NaCl for 7days. Solanum chilense displayed a contrasting behaviour comparatively to S. lycopersicum, not only for mineral nutrition, but also regarding the modalities of osmotic adjustment and phytohormonal profiling. The extent of osmotic adjustment was higher in S. chilense than in S. lycopersicum...
May 2017: Plant Science: An International Journal of Experimental Plant Biology
https://www.readbyqxmd.com/read/28330564/proteomic-analysis-of-stipe-explants-reveals-differentially-expressed-proteins-involved-in-early-direct-somatic-embryogenesis-of-the-tree-fern-cyathea-delgadii-sternb
#6
Lucyna Domżalska, Sylwia Kędracka-Krok, Urszula Jankowska, Małgorzata Grzyb, Mirosław Sobczak, Jan J Rybczyński, Anna Mikuła
Using cyto-morphological analysis of somatic embryogenesis (SE) in the tree fern Cyathea delgadii as a guide, we performed a comparative proteomic analysis in stipe explants undergoing direct SE. Plant material was cultured on hormone-free medium supplemented with 2% sucrose. Phenol extracted proteins were separated using two-dimensional gel electrophoresis (2-DE) and mass spectrometry was performed for protein identification. A total number of 114 differentially regulated proteins was identified during early SE, i...
May 2017: Plant Science: An International Journal of Experimental Plant Biology
https://www.readbyqxmd.com/read/28330559/dge-seq-analysis-of-mur3-related-arabidopsis-mutants-provides-insight-into-how-dysfunctional-xyloglucan-affects-cell-elongation
#7
Zongchang Xu, Meng Wang, Dachuan Shi, Gongke Zhou, Tiantian Niu, Michael G Hahn, Malcolm A O'Neill, Yingzhen Kong
Our previous study of the Arabidopsis mur3-3 mutant and mutant plants in which the mur3-3 phenotypes are suppressed (xxt2mur3-3, xxt5mur3-3, xxt1xxt2mur3-3 and 35Spro:XLT2:mur3-3) showed that hypocotyl cell elongation is decreased in plants that synthesize galactose-deficient xyloglucan. To obtain genome-wide insight into the transcriptome changes and regulatory networks that may be involved in this decreased elongation, we performed digital gene expression analyses of the etiolated hypocotyls of wild type (WT), mur3-3 and the four suppressor lines...
May 2017: Plant Science: An International Journal of Experimental Plant Biology
https://www.readbyqxmd.com/read/28330319/roles-of-plant-hormones-and-anti-apoptosis-genes-during-drought-stress-in-rice-oryza-sativa-l
#8
Mohammad Ubaidillah, Fika Ayu Safitri, Jun-Hyeon Jo, Sang-Kyu Lee, Adil Hussain, Bong-Gyu Mun, Il Kyung Chung, Byung-Wook Yun, Kyung-Min Kim
We previously identified the rice (Oryza sativa) senescence-associated gene OsSAP which encodes a highly conserved protein involved in anti-apoptotic activity. This novel Bax suppressor-related gene regulates tolerance to multiple stresses in yeast. Here, we show the effects of drought stress on leaf and root tissues of plants over-expressing OsSAP in relation to the levels of phytohormones, abscisic acid (ABA), jasmonic acid (JA), indole-3-carboxylic acid (ICA), gibberellic acid (GA3), and zeatin. Results showed that rice plants over-expressing SAP were tolerant to drought stress compared to wild type and the plants over-expressing AtBI-1, which is a homolog of the human Bax inhibitor-1 in Arabidopsis...
December 2016: 3 Biotech
https://www.readbyqxmd.com/read/28330158/a-simple-and-efficient-agrobacterium-tumefaciens-mediated-plant-transformation-of-brassica-rapa-ssp-pekinensis
#9
Venkidasamy Baskar, Baniekal H Gangadhar, Se Won Park, Shivraj Hariram Nile
The present study aims to investigate the numerous factors influencing Agrobacterium tumefaciens-mediated genetic transformation of Chinese cabbage (Brassica rapa ssp. pekinensis). Factors affecting transformation efficiency, such as age of explants, Agrobacterium concentration, and effect of acetosyringone, pre-cultivation, infection and co-cultivation time of Agrobacterium were examined. The pre-cultured hypocotyls from young seedlings prior to exposure to Agrobacterium showed higher shoot regeneration. The plant transformation with the modest A...
June 2016: 3 Biotech
https://www.readbyqxmd.com/read/28329733/comparison-of-transcriptional-expression-patterns-of-carotenoid-metabolism-in-cabernet-sauvignon-grapes-from-two-regions-with-distinct-climate
#10
Wei-Kai Chen, Ke-Ji Yu, Bin Liu, Yi-Bin Lan, Run-Ze Sun, Qiang Li, Fei He, Qiu-Hong Pan, Chang-Qing Duan, Jun Wang
The downstream flux of carotenoid metabolism in grape berries includes the biosynthesis of norisoprenoids, a group of important aroma compounds, and the production of ABA, a well-known plant hormone. This study focused on the transcriptional profiling comparison of genes participating in the biosynthesis of carotenoids, norisoprenoids, and ABA in Vitis vinifera 'Cabernet Sauvignon' grapes at pea size, veraison, and ripening stages. The grapes were obtained from Changli (CL, eastern China) and Gaotai (GT, western China) regions and analyzed using RNA-sequencing technology...
March 9, 2017: Journal of Plant Physiology
https://www.readbyqxmd.com/read/28326089/dynamic-regulation-of-auxin-response-during-rice-development-revealed-by-newly-established-hormone-biosensor-markers
#11
Jing Yang, Zheng Yuan, Qingcai Meng, Guoqiang Huang, Christophe Périn, Charlotte Bureau, Anne-Cécile Meunier, Mathieu Ingouff, Malcolm J Bennett, Wanqi Liang, Dabing Zhang
The hormone auxin is critical for many plant developmental processes. Unlike the model eudicot plant Arabidopsis (Arabidopsis thaliana), auxin distribution and signaling in rice tissues has not been systematically investigated due to the absence of suitable auxin response reporters. In this study we observed the conservation of auxin signaling components between Arabidopsis and model monocot crop rice (Oryza sativa), and generated complementary types of auxin biosensor constructs, one derived from the Aux/IAA-based biosensor DII-VENUS but constitutively driven by maize ubiquitin-1 promoter, and the other termed DR5-VENUS in which a synthetic auxin-responsive promoter (DR5rev ) was used to drive expression of the yellow fluorescent protein (YFP)...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28323529/altered-expression-of-a-chloroplast-protein-affects-the-outcome-of-virus-and-nematode-infection
#12
Elena Ganusova, J Hollis Rice, Timothy Scott Carlew, Akshita Patel, Emmanuel Perrodin-Njoku, Tarek Hewezi, Tessa M Burch-Smith
The chloroplast-resident RNA helicase ISE2 (INCREASED SIZE EXCLUSION LIMIT 2) can modulate the formation and distribution of plasmodesmata and intercellular trafficking. We have determined that ISE2 expression is induced by viral infection. Therefore the responses of Nicotiana benthamiana plants with varying levels of ISE2 expression to infection by Tobacco mosaic virus (TMV) and Turnip mosaic virus (TuMV) were examined. Surprisingly, increased or decreased ISE2 expression led to faster viral systemic spread and is some cases enhanced systemic necrosis...
March 21, 2017: Molecular Plant-microbe Interactions: MPMI
https://www.readbyqxmd.com/read/28323054/cbfs-at-the-crossroads-of-plant-hormone-signaling-in-cold-stress-response
#13
Javier Barrero-Gil, Julio Salinas
No abstract text is available yet for this article.
March 16, 2017: Molecular Plant
https://www.readbyqxmd.com/read/28323049/sutherlandia-frutescens-modulates-adrenal-hormone-biosynthesis-displays-anti-mineralocorticoid-and-serga-properties-acting-as-a-dissociated-glucocorticoid
#14
C A Sergeant, D Africander, P Swart, A C Swart
ETHNOPHARMACOLOGICAL RELEVANCE: Sutherlandia frutescens is a traditional African medicinal plant used in the treatment of stress and anxiety, while also exhibiting anti-inflammatory properties. AIM OF STUDY: The study aimed at linking anti-stress and anti-inflammatory properties of S. frutescens to its influence on glucocorticoid biosynthesis and the inflammatory response via steroid receptor interaction. MATERIALS AND METHODS: The influence of S...
March 18, 2017: Journal of Ethnopharmacology
https://www.readbyqxmd.com/read/28321368/plant-growth-promoting-endophytic-bacteria-versus-pathogenic-infections-an-example-of-bacillus-amyloliquefaciens-rwl-1-and-fusarium-oxysporum-f-sp-lycopersici-in-tomato
#15
Raheem Shahzad, Abdul Latif Khan, Saqib Bilal, Sajjad Asaf, In-Jung Lee
Fungal pathogenic attacks are one of the major threats to the growth and productivity of crop plants. Currently, instead of synthetic fungicides, the use of plant growth-promoting bacterial endophytes has been considered intriguingly eco-friendly in nature. Here, we aimed to investigate the in vitro and in vivo antagonistic approach by using seed-borne endophytic Bacillus amyloliquefaciens RWL-1 against pathogenic Fusarium oxysporum f. sp. lycopersici. The results revealed significant suppression of pathogenic fungal growth by Bacillus amyloliquefaciens in vitro...
2017: PeerJ
https://www.readbyqxmd.com/read/28320784/mechanisms-to-mitigate-the-tradeoff-between-growth-and-defense
#16
Talia Karasov, Eunyoung Chae, Jacob Herman, Joy Bergelson
Plants have evolved an array of defenses against pathogens. However, mounting a defense response frequently comes with the cost of a reduction in growth and reproduction, carrying critical implications for natural and agricultural populations. How costs are generated, and whether and how they can be mitigated is the focus of this review. Most well-characterized growth-defense tradeoffs stem from antagonistic crosstalk among hormones rather than an identified metabolic expenditure. A primary way plants mitigate such costs is through restricted expression of resistance; this can be achieved through inducible expression of defense genes or by the concentration of defense to particular times or tissues...
March 20, 2017: Plant Cell
https://www.readbyqxmd.com/read/28320293/regulatory-peptides-in-plants
#17
REVIEW
B F Vanyushin, V V Ashapkin, N I Aleksandrushkina
Many different peptides regulating cell differentiation, growth, and development are found in plants. Peptides participate in regulation of plant ontogenesis starting from pollination, pollen tube growth, and the very early stages of embryogenesis, including formation of embryo and endosperm. They direct differentiation of meristematic stem cells, formation of tissues and individual organs, take part in regulation of aging, fruit maturation, and abscission of plant parts associated with apoptosis. Biological activity of peptides is observed at very low concentrations, and it has mainly signal nature and hormonal character...
February 2017: Biochemistry. Biokhimii︠a︡
https://www.readbyqxmd.com/read/28319056/shoot-to-root-mobile-polypeptides-involved-in-systemic-regulation-of-nitrogen-acquisition
#18
Yuri Ohkubo, Mina Tanaka, Ryo Tabata, Mari Ogawa-Ohnishi, Yoshikatsu Matsubayashi
Plants uptake nitrogen (N) from the soil mainly in the form of nitrate. However, nitrate is often distributed heterogeneously in natural soil. Plants, therefore, have a systemic long-distance signalling mechanism by which N starvation on one side of the root leads to a compensatory N uptake on the other N-rich side(1,2). This systemic N acquisition response is triggered by a root-to-shoot mobile peptide hormone, C-TERMINALLY ENCODED PEPTIDE (CEP), originating from the N-starved roots(3,4), but the molecular nature of the descending shoot-to-root signal remains elusive...
March 20, 2017: Nature Plants
https://www.readbyqxmd.com/read/28318568/multiresidue-analysis-of-24-water-framework-directive-priority-substances-by-on-line-solid-phase-extraction-liquid-chromatography-tandem-mass-spectrometry-in-environmental-waters
#19
Adrià Rubirola, Mª Rosa Boleda, Mª Teresa Galceran
This paper reports the development of a fully multiresidue and automated on-line solid phase extraction (SPE) - liquid chromatography tandem mass spectrometry (LC-MS/MS) method for the determination of 24 priority substances (PS) belonging to different classes (pesticides, hormones or pharmaceuticals) included in the Directive 2013/39/UE and the recent Watch List (Decision 2015/495) in water samples (drinking water, surface water, and effluent wastewaters). LC-MS/MS conditions and on-line SPE parameters such as sorbent type, sample and wash volumes were optimized...
March 6, 2017: Journal of Chromatography. A
https://www.readbyqxmd.com/read/28314173/histopathology-combined-with-transcriptome-analyses-reveals-the-mechanism-of-resistance-to-meloidogyne-incognita-in-cucumis-metuliferus
#20
De-You Ye, Yong-Hong Qi, Su-Fang Cao, Bing-Qiang Wei, Hua-Sheng Zhang
Root-knot nematodes (Meloidogyne spp.) cause serious threat to cucumber production. Cucumis metuliferus, a relative of cucumber, is reported to be resistant to Meloidogyne incognita, yet the underlying resistance mechanism remains unclear. In this study, the response of resistant C. metuliferus accession PI482443 following nematode infection was studied in comparison with susceptible C. sativus cv. Jinlv No.3. Roots of selected Cucumis seedings were analysed using histological and biochemical techniques. Transcriptome changes of the resistance reaction were investigated by RNA-seq...
February 20, 2017: Journal of Plant Physiology
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