keyword
https://read.qxmd.com/read/38634815/association-between-polymorphisms-in-dna-damage-repair-pathway-genes-and-female-breast-cancer-risk
#1
JOURNAL ARTICLE
Ying Wang, Yalan Sun, Mingjuan Tan, Xin Lin, Ping Tai, Xiaoqin Huang, Qing Jin, Dan Yuan, Tao Xu, Bangshun He
Breast cancer risk have been discussed to be associated with polymorphisms in genes as well as abnormal DNA damage repair function. This study aims to assess the relationship between genes single nucleotide polymorphisms (SNPs) related to DNA damage repair and female breast cancer risk in Chinese population. A case-control study containing 400 patients and 400 healthy controls was conducted. Genotype was identified using the sequence MassARRAY method and expression of estrogen receptor (ER), progesterone receptor (PR) and human epidermal growth factor receptor-2 (HER-2) in tumor tissues was analyzed by immunohistochemistry assay...
April 17, 2024: DNA and Cell Biology
https://read.qxmd.com/read/38589496/high-expression-of-ppp1cc-promotes-nhej-mediated-dna-repair-leading-to-radioresistance-and-poor-prognosis-in-nasopharyngeal-carcinoma
#2
JOURNAL ARTICLE
Ping Feng, Ying Wang, Na Liu, Yanming Chen, Yujun Hu, Zilu Huang, Ya Liu, Shuohan Zheng, Tongchao Jiang, Xiang Xiao, Wei Dai, Peng Huang, Yunfei Xia
Protein phosphatase 1 catalytic subunit gamma (PPP1CC) promotes DNA repair and tumor development and progression, however, its underlying mechanisms remain unclear. This study investigated the molecular mechanism of PPP1CC's involvement in DNA repair and the potential clinical implications. High expression of PPP1CC was significantly correlated with radioresistance and poor prognosis in human nasopharyngeal carcinoma (NPC) patients. The mechanistic study revealed that PPP1CC bound to Ku70/Ku80 heterodimers and activated DNA-PKcs by promoting DNA-PK holoenzyme formation, which enhanced nonhomologous end junction (NHEJ) -mediated DNA repair and led to radioresistance...
April 8, 2024: Cell Death and Differentiation
https://read.qxmd.com/read/38583745/circuggt2-facilitates-progression-and-cisplatin-resistance-of-bladder-cancer-through-nonhomologous-end-joining-pathway
#3
JOURNAL ARTICLE
Fang Lyu, Sihuai Huang, Zhecheng Yan, Qingliu He, Chunyu Liu, Lulin Cheng, Yukun Cong, Kang Chen, Yarong Song, Yifei Xing
The development of resistance to cisplatin (CDDP) in bladder cancer presents a notable obstacle, with indications pointing to the substantial role of circular RNAs (circRNAs) in this resistance. Nevertheless, the precise mechanisms through which circRNAs govern resistance are not yet fully understood. Our findings demonstrate that circUGGT2 is significantly upregulated in bladder cancer, facilitating cancer cell migration and invasion. Additionally, our analysis of eighty patient outcomes revealed a negative correlation between circUGGT2 expression levels and prognosis...
April 5, 2024: Cellular Signalling
https://read.qxmd.com/read/38547127/uncoupling-programmed-dna-cleavage-and-repair-scrambles-the-paramecium-somatic-genome
#4
JOURNAL ARTICLE
Julien Bischerour, Olivier Arnaiz, Coralie Zangarelli, Vinciane Régnier, Florence Iehl, Virginie Ropars, Jean-Baptiste Charbonnier, Mireille Bétermier
In the ciliate Paramecium, precise excision of numerous internal eliminated sequences (IESs) from the somatic genome is essential at each sexual cycle. DNA double-strands breaks (DSBs) introduced by the PiggyMac endonuclease are repaired in a highly concerted manner by the non-homologous end joining (NHEJ) pathway, illustrated by complete inhibition of DNA cleavage when Ku70/80 proteins are missing. We show that expression of a DNA-binding-deficient Ku70 mutant (Ku70-6E) permits DNA cleavage but leads to the accumulation of unrepaired DSBs...
March 27, 2024: Cell Reports
https://read.qxmd.com/read/38496986/-re-viewing-role-of-intracellular-glucose-beyond-extracellular-regulation-of-glucose-stimulated-insulin-secretion-by-pancreatic-cells
#5
JOURNAL ARTICLE
Firdos, Tapabrata Pramanik, Prachi Verma, Aditya Mittal
For glucose-stimulated insulin secretion (GSIS) by pancreatic β-cells in animals, it is believed that ATP generated from glucose metabolism is primarily responsible. However, this ignores two well-established aspects in literature: (a) intracellular ATP generation from other sources resulting in an overall pool of ATP, regardless of the original source, and (b) that intracellular glucose transport is 10- to 100-fold higher than intracellular glucose phosphorylation in β-cells. The latter especially provides an earlier unaddressed, but highly appealing, observation pertaining to (at least transient) the presence of intracellular glucose molecules...
March 12, 2024: ACS Omega
https://read.qxmd.com/read/38493352/ku70-and-caf-1-in-arabidopsis-divergent-roles-in-rdna-stability-and-telomere-homeostasis
#6
JOURNAL ARTICLE
Michal Závodník, Veronika Pavlištová, Adéla Machelová, Martin Lyčka, Iva Mozgová, Karolína Caklová, Martina Dvořáčková, Jiří Fajkus
Deficiency in chromatin assembly factor-1 (CAF-1) in plants through dysfunction of its components, FASCIATA1 and 2 (FAS1, FAS2), leads to the specific and progressive loss of rDNA and telomere repeats in plants. This loss is attributed to defective repair mechanisms for the increased DNA breaks encountered during replication, a consequence of impaired replication-dependent chromatin assembly. In this study, we explore the role of KU70 in these processes. Our findings reveal that, although the rDNA copy number is reduced in ku70 mutants when compared with wild-type plants, it is not markedly affected by diverse KU70 status in fas1 mutants...
March 17, 2024: Plant Journal
https://read.qxmd.com/read/38460628/circnop14-increases-the-radiosensitivity-of-hepatocellular-carcinoma-via-inhibition-of-ku70-dependent-dna-damage-repair
#7
JOURNAL ARTICLE
Letao Lin, Pan Hu, Ma Luo, Xi Chen, Meigui Xiao, Zhihui Zhong, Sheng Peng, Guanyu Chen, Guang Yang, Fujun Zhang, Yanling Zhang
Circular RNAs (circRNAs) are profoundly affected in hepatocellular carcinoma (HCC) through various pathways. However, the role of circRNAs in the radiosensitivity of HCC cells is yet to be explored. In this study, we identified a circRNA-hsa_circ_0006737 (circNOP14) involved in the radiosensitivity of HCC. We found that circNOP14 increased the radiosensitivity of HCC cells both in vitro and in vivo. Notably, using a circRNA pulldown assay and RNA-binding protein immunoprecipitation, we identified Ku70 as a novel and robust interacting protein of circNOP14...
March 7, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38423014/a-di-acetyl-decorated-chromatin-signature-couples-liquid-condensation-to-suppress-dna-end-synapsis
#8
JOURNAL ARTICLE
Kaiwen Bao, Yanhui Ma, Yuan Li, Xilin Shen, Jiao Zhao, Shanshan Tian, Chunyong Zhang, Can Liang, Ziyan Zhao, Ying Yang, Kai Zhang, Na Yang, Fei-Long Meng, Jihui Hao, Jie Yang, Tao Liu, Zhi Yao, Ding Ai, Lei Shi
Appropriate DNA end synapsis, regulated by core components of the synaptic complex including KU70-KU80, LIG4, XRCC4, and XLF, is central to non-homologous end joining (NHEJ) repair of chromatinized DNA double-strand breaks (DSBs). However, it remains enigmatic whether chromatin modifications can influence the formation of NHEJ synaptic complex at DNA ends, and if so, how this is achieved. Here, we report that the mitotic deacetylase complex (MiDAC) serves as a key regulator of DNA end synapsis during NHEJ repair in mammalian cells...
February 21, 2024: Molecular Cell
https://read.qxmd.com/read/38412274/dna-pkcs-suppresses-illegitimate-chromosome-rearrangements
#9
JOURNAL ARTICLE
Jinglong Wang, Cheyenne A Sadeghi, Richard L Frock
Two DNA repair pathways, non-homologous end joining (NHEJ) and alternative end joining (A-EJ), are involved in V(D)J recombination and chromosome translocation. Previous studies reported distinct repair mechanisms for chromosome translocation, with NHEJ involved in humans and A-EJ in mice predominantly. NHEJ depends on DNA-PKcs, a critical partner in synapsis formation and downstream component activation. While DNA-PKcs inhibition promotes chromosome translocations harboring microhomologies in mice, its synonymous effect in humans is not known...
February 27, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38407308/dna-pk-controls-apollo-s-access-to-leading-end-telomeres
#10
JOURNAL ARTICLE
Ceylan Sonmez, Beatrice Toia, Patrik Eickhoff, Andreea Medeea Matei, Michael El Beyrouthy, Björn Wallner, Max E Douglas, Titia de Lange, Francisca Lottersberger
The complex formed by Ku70/80 and DNA-PKcs (DNA-PK) promotes the synapsis and the joining of double strand breaks (DSBs) during canonical non-homologous end joining (c-NHEJ). In c-NHEJ during V(D)J recombination, DNA-PK promotes the processing of the ends and the opening of the DNA hairpins by recruiting and/or activating the nuclease Artemis/DCLRE1C/SNM1C. Paradoxically, DNA-PK is also required to prevent the fusions of newly replicated leading-end telomeres. Here, we describe the role for DNA-PK in controlling Apollo/DCLRE1B/SNM1B, the nuclease that resects leading-end telomeres...
February 26, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38374229/fsp1-inhibition-enhances-olaparib-sensitivity-in-brca-proficient-ovarian-cancer-patients-via-a-nonferroptosis-mechanism
#11
JOURNAL ARTICLE
Huixian Miao, Huangyang Meng, Yashuang Zhang, Tian Chen, Lin Zhang, Wenjun Cheng
Poly ADP-ribose polymerase inhibitors (PARPis) exhibit promising efficacy in patients with BRCA mutations or homologous repair deficiency (HRD) in ovarian cancer (OC). However, less than 40% of patients have HRD, it is vital to expand the indications for PARPis in BRCA-proficient patients. Ferroptosis suppressor protein 1 (FSP1) is a key protein in a newly identified ferroptosis-protective mechanism that occurs in parallel with the GPX4-mediated pathway and is associated with chemoresistance in several cancers...
February 19, 2024: Cell Death and Differentiation
https://read.qxmd.com/read/38367174/boric-acid-affects-the-expression-of-dna-double-strand-break-repair-factors-in-a549-cells-and-a549-cancer-stem-cells-an-in-vitro-study
#12
JOURNAL ARTICLE
Tuğba Semerci Sevimli, Aynaz Ghorbani, Bahar Demir Cevizlidere, Burcugül Altuğ, Murat Sevimli
DNA double-strand break (DSB) repair genes interact with tumor stemness- and resistance-associated processes in cancer stem cells (CSCs). Therefore, targeting DNA DSB genes in cancer treatment is important for the CSC phenotype. Although the anti-cancer effect of boric acid (BA) has been studied, its effect on DNA DSB is unclear. Moreover, no studies investigate BA's effects on DNA DSB of lung cancer stem cells (LC-SCs). To fill the gap, we aimed to assess the effects of BA on A549 cancer stem cells. CSCs were isolated from human non-small cell lung cancer cells (A549) and characterized by flow cytometry...
February 17, 2024: Biological Trace Element Research
https://read.qxmd.com/read/38353495/deposition-of-onco-histone-h3-3-g34w-leads-to-dna-repair-deficiency-and-activates-cgas-sting-mediated-immune-responses
#13
JOURNAL ARTICLE
Daniela Mancarella, Henrik Ellinghaus, Gianluca Sigismondo, Olivera Veselinov, Alexander Kühn, Ashish Goyal, Mark Hartmann, Jörg Fellenberg, Jeroen Krijgsveld, Christoph Plass, Odilia Popanda, Peter Schmezer, Ali Bakr
Mutations in histone H3.3-encoding genes causing mutant histone tails are associated with specific cancers such as pediatric glioblastomas (H3.3-G34R/V) and giant cell tumor of the bone (H3.3-G34W). The mechanisms by which these mutations promote malignancy are not completely understood. Here we show that cells expressing H3.3-G34W exhibit DNA double-strand breaks (DSBs) repair defects and increased cellular sensitivity to ionizing radiation (IR). Mechanistically, H3.3-G34W can be deposited to damaged chromatin, but in contrast to wild-type H3...
February 14, 2024: International Journal of Cancer. Journal International du Cancer
https://read.qxmd.com/read/38324086/crispr-cas9-based-toolkit-for-rapid-marker-recycling-and-combinatorial-libraries-in-komagataella-phaffii
#14
JOURNAL ARTICLE
Wei Zhou, Yuanyi Li, Guosong Liu, Weichuang Qin, Dongzhi Wei, Fengqing Wang, Bei Gao
Komagataella phaffii, a nonconventional yeast, is increasingly attractive to researchers owing to its posttranslational modification ability, strict methanol regulatory mechanism, and lack of Crabtree effect. Although CRISPR-based gene editing systems have been established in K. phaffii, there are still some inadequacies compared to the model organism Saccharomyces cerevisiae. In this study, a redesigned gRNA plasmid carrying red and green fluorescent proteins facilitated plasmid construction and marker recycling, respectively, making marker recycling more convenient and reliable...
February 7, 2024: Applied Microbiology and Biotechnology
https://read.qxmd.com/read/38311177/loss-of-dna2-fidelity-results-in-decreased-exo1-mediated-resection-at-dna-double-strand-breaks
#15
JOURNAL ARTICLE
Aditya Mojumdar, Courtney Granger, Martine Lunke, Jennifer A Cobb
A DNA double strand break (DSB) is one of the most dangerous types of DNA damage that is repaired largely by homologous recombination (HR) or non-homologous end-joining (NHEJ). The interplay of repair factors at the break directs which pathway is used, and a subset of these factors also function in more mutagenic alternative (alt) repair pathways. Resection is a key event in repair pathway choice and extensive resection, which is a hallmark of HR, is mediated by two nucleases, Exo1 and Dna2. We observed differences in resection and repair outcomes in cells harbouring nuclease dead dna2-1 compared to dna2Δ pif1-m2 that could be attributed to the level of Exo1 recovered at DSBs...
February 2, 2024: Journal of Biological Chemistry
https://read.qxmd.com/read/38277448/ku70-senses-cytosolic-dna-and-assembles-a-tumor-suppressive-signalosome
#16
JOURNAL ARTICLE
Abhimanu Pandey, Cheng Shen, Shouya Feng, Daniel Enosi Tuipulotu, Chinh Ngo, Cheng Liu, Melan Kurera, Anukriti Mathur, Shweta Venkataraman, Jing Zhang, Dipti Talaulikar, Renhua Song, Justin J-L Wong, Narci Teoh, Nadeem O Kaakoush, Si Ming Man
The innate immune response contributes to the development or attenuation of acute and chronic diseases, including cancer. Microbial DNA and mislocalized DNA from damaged host cells can activate different host responses that shape disease outcomes. Here, we show that mice and humans lacking a single allele of the DNA repair protein Ku70 had increased susceptibility to the development of intestinal cancer. Mechanistically, Ku70 translocates from the nucleus into the cytoplasm where it binds to cytosolic DNA and interacts with the GTPase Ras and the kinase Raf, forming a tripartite protein complex and docking at Rab5+ Rab7+ early-late endosomes...
January 26, 2024: Science Advances
https://read.qxmd.com/read/38272357/simulated-microgravity-induces-dna-damage-concurrent-with-impairment-of-dna-repair-and-activation-of-cell-type-specific-dna-damage-response-in-microglial-and-glioblastoma-cells
#17
JOURNAL ARTICLE
Ragini Singh, Aishwarya Jaiswal, Rana P Singh
Long-term spaceflights affect the structural changes in brain, alter motor or cognitive function and associated development of neuro-optic syndrome in astronauts. Studies addressing the impact of microgravity on brain cells are very limited. Herein, we employed microglial (CHME3) and glioblastoma (U87MG and A172) cells to study their molecular and functional adaptations under simulated microgravity (SMG) exposure. A reduction in cell viability and proliferation with decreased levels of PCNA were observed in these cells...
January 23, 2024: Biochimica et Biophysica Acta. Molecular Cell Research
https://read.qxmd.com/read/38254409/resveratrol-promotes-proliferation-antioxidant-properties-and-progesterone-production-in-yak-bos-grunniens-granulosa-cells
#18
JOURNAL ARTICLE
Xudong Jiang, Yao Ma, Sanni Gong, Xiangdong Zi, Dawei Zhang
Resveratrol (RES) is a class of natural polyphenolic compounds known for its strong anti-apoptotic and antioxidant properties. Granulosa cells (GCs) are one of the important components of ovarian follicles and play crucial roles in follicular development of follicles in the ovary. Here, we explored the effects of RES on the proliferation and functions of yak GCs. Firstly, we evaluated the effect of RES dose and time in culture on the viability of GCs, and then the optimum treatment protocol (10 μM RES, 36 h) was selected to analyze the effects of RES on the proliferation, cell cycle, apoptosis, malondialdehyde (MDA), glutathione (GSH), reactive oxygen species (ROS) accumulation, lipid droplet content, ATP production, and steroidogenesis of GCs, as well as the expression of related genes...
January 12, 2024: Animals: An Open Access Journal From MDPI
https://read.qxmd.com/read/38216643/molecular-cloning-subcellular-localization-and-rapid-recruitment-to-dna-damage-sites-of-chicken-ku70
#19
JOURNAL ARTICLE
Manabu Koike, Hideji Yamashita, Yasutomo Yutoku, Aki Koike
Ku70 is a multifunctional protein with pivotal roles in DNA repair via non-homologous end-joining, V(D)J recombination, telomere maintenance, and neuronal apoptosis control. Nonetheless, its regulatory mechanisms remain elusive. Chicken Ku70 (GdKu70) cDNA has been previously cloned, and DT40 cells expressing it have significantly contributed to critical biological discoveries. GdKu70 features an additional 18 amino acids at its N-terminus compared to mammalian Ku70, the biological significance of which remains uncertain...
January 12, 2024: Scientific Reports
https://read.qxmd.com/read/38179887/deficiency-of-both-classical-and-alternative-end-joining-pathways-leads-to-a-synergistic-defect-in-double-strand-break-repair-but-not-to-an-increase-in-homology-dependent-gene-targeting-in-arabidopsis
#20
JOURNAL ARTICLE
Laura Merker, Laura Feller, Annika Dorn, Holger Puchta
In eukaryotes, double-strand breaks (DSBs) are either repaired by homologous recombination (HR) or non-homologous end-joining (NHEJ). In somatic plant cells, HR is very inefficient. Therefore, the vast majority of DSBs are repaired by two different pathways of NHEJ. The classical (cNHEJ) pathway depends on the heterodimer KU70/KU80, while polymerase theta (POLQ) is central to the alternative (aNHEJ) pathway. Surprisingly, Arabidopsis plants are viable, even when both pathways are impaired. However, they exhibit severe growth retardation and reduced fertility...
January 5, 2024: Plant Journal
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