keyword
https://read.qxmd.com/read/38617239/a-vibrio-cholerae-type-iv-restriction-system-targets-glucosylated-5-hydroxyl-methyl-cytosine-to-protect-against-phage-infection
#1
Jasper B Gomez, Christopher M Waters
UNLABELLED: A major challenge faced by Vibrio cholerae is constant predation by bacteriophage (phage) in aquatic reservoirs and during infection of human hosts. To overcome phage predation, V. cholerae has evolved a myriad of phage defense systems. Although several novel defense systems have been discovered, we hypothesized more were encoded in V. cholerae given the relative paucity of phage that have been isolated which infect this species. Using a V. cholerae genomic library, we identified a Type IV restriction system consisting of two genes within a 16kB region of the Vibrio pathogenicity island-2 that we name TgvA and TgvB ( T ype I-embedded g mrSD-like system of V PI-2)...
April 5, 2024: bioRxiv
https://read.qxmd.com/read/38614631/safety-and-immunogenicity-of-the-euvichol-s-oral-cholera-vaccine-for-prevention-of-vibrio-cholerae-o1-infection-in-nepal-an-observer-blind-active-controlled-randomised-non-inferiority-phase-3-trial
#2
RANDOMIZED CONTROLLED TRIAL
Katerina Rok Song, Ram Hari Chapagain, Dipesh Tamrakar, Rajeev Shrestha, Piush Kanodia, Shipra Chaudhary, T Anh Wartel, Jae Seung Yang, Deok Ryun Kim, Jinae Lee, Eun Lyeong Park, Haeun Cho, Jiyoung Lee, Patchara Thaisrivichai, Sridhar Vemula, Bo Mi Kim, Birendra Gupta, Tarun Saluja, Ruchir Kumar Pansuriya, Ravi Ganapathy, Yeong Ok Baik, Young Jin Lee, Suhi Jeon, Youngran Park, Howard L Her, Youngshin Park, Julia A Lynch
BACKGROUND: In October, 2017, WHO launched a strategy to eliminate cholera by 2030. A primary challenge in meeting this goal is the limited global supply capacity of oral cholera vaccine and the worsening of cholera outbreaks since 2021. To help address the current shortage of oral cholera vaccine, a WHO prequalified oral cholera vaccine, Euvichol-Plus was reformulated by reducing the number of components and inactivation methods. We aimed to evaluate the immunogenicity and safety of Euvichol-S (EuBiologics, Seoul, South Korea) compared with an active control vaccine, Shanchol (Sanofi Healthcare India, Telangana, India) in participants of various ages in Nepal...
May 2024: Lancet Global Health
https://read.qxmd.com/read/38609487/molecular-identification-of-proteus-mirabilis-vibrio-species-leading-to-crispr-cas9-modification-of-tcpa-and-urec-genes-causing-cholera-and-uti
#3
JOURNAL ARTICLE
Muhammad Naveed, Fatima Tahir, Tariq Aziz, Muhammad Waseem, Syeda Izma Makhdoom, Nouman Ali, Metab Alharbi, Thamer H Albekairi, Abdullah F Alasmari
Heavy metal accumulation increases rapidly in the environment due to anthropogenic activities and industrialization. The leather and surgical industry produces many contaminants containing heavy metals. Cadmium, a prominent contaminant, is linked to severe health risks, notably kidney and liver damage, especially among individuals exposed to contaminated wastewater. This study aims to leverage the natural cadmium resistance mechanisms in bacteria for bioaccumulation purposes. The industrial wastewater samples, characterized by an alarming cadmium concentration of 29...
April 12, 2024: Scientific Reports
https://read.qxmd.com/read/38600130/fuzzy-recognition-by-the-prokaryotic-transcription-factor-higa2-from-vibrio-cholerae
#4
JOURNAL ARTICLE
San Hadži, Zala Živič, Matic Kovačič, Uroš Zavrtanik, Sarah Haeserts, Daniel Charlier, Janez Plavec, Alexander N Volkov, Jurij Lah, Remy Loris
Disordered protein sequences can exhibit different binding modes, ranging from well-ordered folding-upon-binding to highly dynamic fuzzy binding. The primary function of the intrinsically disordered region of the antitoxin HigA2 from Vibrio cholerae is to neutralize HigB2 toxin through ultra-high-affinity folding-upon-binding interaction. Here, we show that the same intrinsically disordered region can also mediate fuzzy interactions with its operator DNA and, through interplay with the folded helix-turn-helix domain, regulates transcription from the higBA2 operon...
April 10, 2024: Nature Communications
https://read.qxmd.com/read/38598601/genetic-interaction-mapping-reveals-functional-relationships-between-peptidoglycan-endopeptidases-and-carboxypeptidases
#5
JOURNAL ARTICLE
Manuela Alvarado Obando, Diego Rey-Varela, Felipe Cava, Tobias Dörr
Peptidoglycan (PG) is the main component of the bacterial cell wall; it maintains cell shape while protecting the cell from internal osmotic pressure and external environmental challenges. PG synthesis is essential for bacterial growth and survival, and a series of PG modifications are required to allow expansion of the sacculus. Endopeptidases (EPs), for example, cleave the crosslinks between adjacent PG strands to allow the incorporation of newly synthesized PG. EPs are collectively essential for bacterial growth and must likely be carefully regulated to prevent sacculus degradation and cell death...
April 10, 2024: PLoS Genetics
https://read.qxmd.com/read/38593463/transposons-carrying-the-aacc2e-aminoglycoside-and-bla-tem-beta-lactam-resistance-genes-in-acinetobacter
#6
JOURNAL ARTICLE
Liam A Tobin, Amy K Cain, Steven P Djordjevic, Mehrad Hamidian
This study examines the genetic contexts and evolutionary steps responsible for the formation of the widely spread transposon Tn 6925 carrying bla TEM and aacC2e, which confers resistance to beta-lactam and aminoglycoside antibiotics in Gram-negative bacteria. The bla TEM-1 and aacC2e genes were found in several transposons. They were first observed within an IS 26 bounded 3.7 kb transposon (Tn 6925) on several Acinetobacter baumannii plasmids located within a 4.7 kb dif module. Truncated and expanded variations of Tn 6925 were found across other A...
April 8, 2024: Microbial Drug Resistance: MDR: Mechanisms, Epidemiology, and Disease
https://read.qxmd.com/read/38593061/determining-the-young-s-modulus-of-the-bacterial-cell-envelope
#7
JOURNAL ARTICLE
Junsung Lee, Karan Jha, Christine E Harper, Wenyao Zhang, Malissa Ramsukh, Nikolaos Bouklas, Tobias Dörr, Peng Chen, Christopher J Hernandez
Bacteria experience substantial physical forces in their natural environment, including forces caused by osmotic pressure, growth in constrained spaces, and fluid shear. The cell envelope is the primary load-carrying structure of bacteria, but the mechanical properties of the cell envelope are poorly understood; reports of Young's modulus of the cell envelope of Escherichia coli range from 2 to 18 MPa. We developed a microfluidic system to apply mechanical loads to hundreds of bacteria at once and demonstrated the utility of the approach for evaluating whole-cell stiffness...
April 9, 2024: ACS Biomaterials Science & Engineering
https://read.qxmd.com/read/38585829/new-vibrio-cholerae-sequences-from-eastern-and-southern-africa-alter-our-understanding-of-regional-cholera-transmission
#8
Shaoming Xiao, Ahmed Abade, Waqo Boru, Watipaso Kasambara, John Mwaba, Francis Ongole, Mariam Mmanywa, Nídia Sequeira Trovão, Roma Chilengi, Geoffrey Kwenda, Christopher Garimoi Orach, Innocent Chibwe, Godfrey Bwire, O Colin Stine, Aaron M Milstone, Justin Lessler, Andrew S Azman, Wensheng Luo, Kelsey Murt, David A Sack, Amanda K Debes, Shirlee Wohl
Despite ongoing containment and vaccination efforts, cholera remains prevalent in many countries in sub-Saharan Africa. Part of the difficulty in containing cholera comes from our lack of understanding of how it circulates throughout the region. To better characterize regional transmission, we generated and analyzed 118 Vibrio cholerae genomes collected between 2007-2019 from five different countries in Southern and Eastern Africa. We showed that V. cholerae sequencing can be successful from a variety of sample types and filled in spatial and temporal gaps in our understanding of circulating lineages, including providing some of the first sequences from the 2018-2019 outbreaks in Uganda, Kenya, Tanzania, Zambia, and Malawi...
March 30, 2024: medRxiv
https://read.qxmd.com/read/38579715/small-rnas-direct-attack-and-defense-mechanisms-in-a-quorum-sensing-phage-and-its-host
#9
JOURNAL ARTICLE
Marcel Sprenger, Malte Siemers, Sebastian Krautwurst, Kai Papenfort
Many, if not all, bacteria use quorum sensing (QS) to control collective behaviors, and more recently, QS has also been discovered in bacteriophages (phages). Phages can produce communication molecules of their own, or "listen in" on the host's communication processes, to switch between lytic and lysogenic modes of infection. Here, we study the interaction of Vibrio cholerae with the lysogenic phage VP882, which is activated by the QS molecule DPO. We discover that induction of VP882 results in the binding of phage transcripts to the major RNA chaperone Hfq, which in turn outcompetes and downregulates host-encoded small RNAs (sRNAs)...
April 2, 2024: Cell Host & Microbe
https://read.qxmd.com/read/38579327/genomic-characteristics-of-clinical-non-toxigenic-vibrio-cholerae-isolates-in-switzerland-a-cross-sectional-study
#10
JOURNAL ARTICLE
Natalie Meyer, Roger Stephan, Nicole Cernela, Jule Anna Horlbog, Michael Biggel
STUDY AIMS: Although non-toxigenic Vibrio cholerae lack the ctxAB genes encoding cholera toxin, they can cause diarrhoeal disease and outbreaks in humans. In Switzerland, V. cholerae is a notifiable pathogen and all clinical isolates are analysed at the National Reference Laboratory for Enteropathogenic Bacteria and Listeria. Up to 20 infections are reported annually. In this study, we investigated the population structure and genetic characteristics of non-toxigenic V...
April 2, 2024: Swiss Medical Weekly
https://read.qxmd.com/read/38578806/belt-and-braces-two-escape-ways-to-maintain-the-cassette-reservoir-of-large-chromosomal-integrons
#11
JOURNAL ARTICLE
Egill Richard, Baptiste Darracq, Eloi Littner, Gael A Millot, Valentin Conte, Thomas Cokelaer, Jan Engelstädter, Eduardo P C Rocha, Didier Mazel, Céline Loot
Integrons are adaptive devices that capture, stockpile, shuffle and express gene cassettes thereby sampling combinatorial phenotypic diversity. Some integrons called sedentary chromosomal integrons (SCIs) can be massive structures containing hundreds of cassettes. Since most of these cassettes are non-expressed, it is not clear how they remain stable over long evolutionary timescales. Recently, it was found that the experimental inversion of the SCI of Vibrio cholerae led to a dramatic increase of the cassette excision rate associated with a fitness defect...
April 5, 2024: PLoS Genetics
https://read.qxmd.com/read/38570545/comparison-of-analysis-methods-to-classify-cholera-hotspots-in-ethiopia-from-2015-to-2021
#12
JOURNAL ARTICLE
Yeshambel Worku Demlie, Sandra Moore, Jessica Dunoyer, Dereje Muluneh, Mukemil Hussen, Mesfin Wossen, Moti Edosa, Bertrand Sudre
Cholera continues to represent a major public health concern in Ethiopia. The country has developed a Multi-sectoral National Cholera Elimination Plan in 2022, which targets prevention and control interventions in cholera hotspots. Multiple methods to classify cholera hotspots have been used in several countries. Since 2014, a classification method developed by United Nations Children's Fund has been applied to guide water, sanitation and hygiene interventions throughout Sub-Saharan Africa based on three outbreak parameters: frequency, duration and standardized attack rate...
April 3, 2024: Scientific Reports
https://read.qxmd.com/read/38564611/distribution-of-bacteria-and-antimicrobial-resistance-in-retail-nile-tilapia-oreochromis-spp-as-potential-sources-of-foodborne-illness
#13
JOURNAL ARTICLE
Jarukorn Sripradite, Varangkana Thaotumpitak, Edward R Atwill, Woranich Hinthong, Saharuetai Jeamsripong
This study aimed to investigate AMR profiles of Aeromonas hydrophila, Salmonella spp., and Vibrio cholerae isolated from Nile tilapia (Oreochromis spp.) (n = 276) purchased from fresh markets and supermarkets in Bangkok, Thailand. A sample of tilapia was divided into three parts: fish intestine (n = 276), fish meat (n = 276), and liver and kidney (n = 276). The occurrence of A. hydrophila, Salmonella, and V. cholerae was 3.1%, 7.4%, and 8.5%, respectively. A high prevalence of these pathogenic bacteria was observed in fresh market tilapia compared to those from supermarkets (p < 0...
2024: PloS One
https://read.qxmd.com/read/38559768/mucorice-ctb-line-19a-a-new-marker-free-transgenic-rice-based-cholera-vaccine-produced-in-an-led-based-hydroponic-system
#14
JOURNAL ARTICLE
Yoshikazu Yuki, Shiho Kurokawa, Kotomi Sugiura, Koji Kashima, Shinichi Maruyama, Tomoyuki Yamanoue, Ayaka Honma, Mio Mejima, Natsumi Takeyama, Masaharu Kuroda, Hiroko Kozuka-Hata, Masaaki Oyama, Takehiro Masumura, Rika Nakahashi-Ouchida, Kohtaro Fujihashi, Takashi Hiraizumi, Eiji Goto, Hiroshi Kiyono
We previously established the selection-marker-free rice-based oral cholera vaccine (MucoRice-CTB) line 51A for human use by Agrobacterium -mediated co-transformation and conducted a double-blind, randomized, placebo-controlled phase I trial in Japan and the United States. Although MucoRice-CTB 51A was acceptably safe and well tolerated by healthy Japanese and U.S. subjects and induced CTB-specific antibodies neutralizing cholera toxin secreted by Vibrio cholerae , we were limited to a 6-g cohort in the U.S...
2024: Frontiers in Plant Science
https://read.qxmd.com/read/38549076/spatiotemporal-dynamics-of-cholera-hotspots-in-the-democratic-republic-of-the-congo-from-1973-to-2022
#15
JOURNAL ARTICLE
Nadège Taty, Didier Bompangue, Sandra Moore, J J Muyembe, Nancy Meschinet de Richemond
BACKGROUND: Since the early 1970s, cholera outbreaks have been a major public health burden in the Democratic Republic of Congo (DRC). Cholera cases have been reported in a quasi-continuous manner in certain lakeside areas in the Great Lakes Region. As these cholera-endemic health zones constitute a starting point for outbreaks and diffusion towards other at-risk areas, they play a major role in cholera dynamics in the country. Monitoring the spatiotemporal dynamics of cholera hotspots and adjusting interventions accordingly thus reduces the disease burden in an efficient and cost-effective manner...
March 28, 2024: BMC Infectious Diseases
https://read.qxmd.com/read/38543665/combined-tcbs-and-chromagar-analyses-allow-for-basic-identification-of-vibrio-vulnificus-within-a-48-h-incubation-period-in-the-coastal-baltic-sea
#16
JOURNAL ARTICLE
Conor Christopher Glackin, Susann Dupke, Thota Sharath Chandra, David Riedinger, Matthias Labrenz
With rising infection rates in recent years, Vibrio vulnificus poses an increasing threat to public safety in the coastal brackish Baltic Sea. It is therefore important to monitor this organism and assess the V. vulnificus infection risk on a more regular basis. However, as the coastline of the Baltic Sea is 8000 km long and shared by nine nations, a convenient, fast, inexpensive, yet efficient V. vulnificus identification method is essential. We evaluated the effectiveness of a two-step agar-based approach consisting of successive Vibrio isolation and cultivation on thiosulphate-citrate-bile salt sucrose (TCBS) agar and CHROMagar™ Vibrio for V...
March 19, 2024: Microorganisms
https://read.qxmd.com/read/38543543/l-ascorbic-acid-restricts-vibrio-cholerae-survival-in-various-growth-conditions
#17
JOURNAL ARTICLE
Himanshu Sen, Manpreet Kaur, Saumya Ray Chaudhuri
Cholera, a deadly diarrheal disease, continues to ravage various parts of the world. It is caused by Vibrio cholerae , an important member of the gamma-proteobacteria. Based on certain genetic and phenotypic tests, the organism is classified into two major biotypes, namely classical and El Tor. The El Tor and its variants are majorly responsible for the ongoing seventh pandemic across the globe. Previously, we have shown that cross-feeding of glucose metabolic acidic by-products of gut commensals can severely affect the viability of the biotypes...
February 29, 2024: Microorganisms
https://read.qxmd.com/read/38529069/isolation-and-characterization-of-cholera-toxin-gene-positive-vibrio-cholerae-non-o1-non-o139-isolated-from-urinary-tract-infection-a-case-report
#18
Reem Aljindan, Reema Allahham, Rana Alghamdi, Ibrahim Alhabib, Samia AlNassri, Wala Alkhalifa, Asim Diab, Amer Alomar, Lamya Yamani, Nasreldin Elhadi
BACKGROUND: Urinary tract infection (UTI) caused by V. cholerae is rare and less common. V. cholerae is a Gram-negative bacterium motile using single polar flagellum and, originally, is a waterborne microbe found in aquatic and estuarine environments. Toxigenic V. cholerae is well-known as a causative agent of acute and excessive watery diarrhea after ingesting food and water contaminated with this bacterium. CASE PRESENTATION: A 27-year-old male patient presented to the emergency department on 17th July 2021 with burning micturition, normal vital signs, and no fever, vomiting, or diarrhea...
2024: Infection and Drug Resistance
https://read.qxmd.com/read/38518953/german-coasts-harbor-non-o1-non-o139-vibrio-cholerae-with-clinical-virulence-gene-profiles
#19
JOURNAL ARTICLE
Quantao Zhang, Thomas Alter, Eckhard Strauch, Inga Eichhorn, Maria Borowiak, Carlus Deneke, Susanne Fleischmann
Non-O1/non-O139 Vibrio cholerae (NOVC) are ubiquitous in aquatic ecosystems. In rare cases, they can cause intestinal and extra-intestinal infections in human. This ability is associated with various virulence factors. The presence of NOVC in German North Sea and Baltic Sea was observed in previous studies. However, data on virulence characteristics are still scarce. Therefore, this work aimed to investigating the virulence potential of NOVC isolated in these two regions. In total, 31 NOVC strains were collected and subjected to whole genome sequencing...
March 20, 2024: Infection, Genetics and Evolution
https://read.qxmd.com/read/38515294/stopover-habitat-selection-drives-variation-in-the-gut-microbiome-composition-and-pathogen-acquisition-by-migrating-shorebirds
#20
JOURNAL ARTICLE
Radosław Włodarczyk, Joanna Drzewińska-Chańko, Maciej Kamiński, Włodzimierz Meissner, Jan Rapczyński, Katarzyna Janik-Superson, Dawid Krawczyk, Dominik Strapagiel, Agnieszka Ożarowska, Katarzyna Stępniewska, Piotr Minias
Long-distance host movements play a major regulatory role in shaping microbial communities of their digestive tract. Here, we studied gut microbiota composition during seasonal migration in five shorebird species (Charadriiformes) that use different migratory (stopover) habitats. Our analyses revealed significant interspecific variation in both composition and diversity of gut microbiome, but the effect of host identity was weak. A strong variation in gut microbiota was observed between coastal and inland (dam reservoir and river valley) stopover habitats within species...
March 21, 2024: FEMS Microbiology Ecology
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