keyword
https://read.qxmd.com/read/37563174/nvprdm14d-expressing-neural-progenitor-cells-contribute-to-non-ectodermal-neurogenesis-in-nematostella-vectensis
#21
JOURNAL ARTICLE
Quentin I B Lemaître, Natascha Bartsch, Ian U Kouzel, Henriette Busengdal, Gemma Sian Richards, Patrick R H Steinmetz, Fabian Rentzsch
Neurogenesis has been studied extensively in the ectoderm, from which most animals generate the majority of their neurons. Neurogenesis from non-ectodermal tissue is, in contrast, poorly understood. Here we use the cnidarian Nematostella vectensis as a model to provide new insights into the molecular regulation of non-ectodermal neurogenesis. We show that the transcription factor NvPrdm14d is expressed in a subpopulation of NvSoxB(2)-expressing endodermal progenitor cells and their NvPOU4-expressing progeny...
August 10, 2023: Nature Communications
https://read.qxmd.com/read/37454209/functional-characterization-of-the-transient-receptor-potential-melastatin-2-trpm2-cation-channel-from-nematostella-vectensis-reconstituted-into-lipid-bilayer
#22
JOURNAL ARTICLE
Andras Szollosi, János Almássy
Transient receptor potential melastatin 2 (TRPM2) cation channel activity is required for insulin secretion, immune cell activation and body heat control. Channel activation upon oxidative stress is involved in the pathology of stroke and neurodegenerative disorders. Cytosolic Ca2+ , ADP-ribose (ADPR) and phosphatidylinositol-4,5-bisphosphate (PIP2 ) are the obligate activators of the channel. Several TRPM2 cryo-EM structures have been resolved to date, yet functionality of the purified protein has not been tested...
July 15, 2023: Scientific Reports
https://read.qxmd.com/read/37420095/starvation-decreases-immunity-and-immune-regulatory-factor-nf-%C3%AE%C2%BAb-in-the-starlet-sea-anemone-nematostella-vectensis
#23
JOURNAL ARTICLE
Pablo J Aguirre Carrión, Niharika Desai, Joseph J Brennan, James E Fifer, Trevor Siggers, Sarah W Davies, Thomas D Gilmore
Lack of proper nutrition has important consequences for the physiology of all organisms, and nutritional status can affect immunity, based on many studies in terrestrial animals. Here we show a positive correlation between nutrition and immunity in the sea anemone Nematostella vectensis. Gene expression profiling of adult anemones shows downregulation of genes involved in nutrient metabolism, cellular respiration, and immunity in starved animals. Starved adult anemones also have reduced protein levels and activity of immunity transcription factor NF-κB...
July 7, 2023: Communications Biology
https://read.qxmd.com/read/37325595/environmental-and-molecular-regulation-of-asexual-reproduction-in-the-sea-anemone-nematostella-vectensis
#24
JOURNAL ARTICLE
Layla Al-Shaer, Whitney Leach, Noor Baban, Mia Yagodich, Mathew C Gibson, Michael J Layden
Cnidarians exhibit incredible reproductive diversity, with most capable of sexual and asexual reproduction. Here, we investigate factors that influence asexual reproduction in the burrowing sea anemone Nematostella vectensis, which can propagate asexually by transverse fission of the body column. By altering culture conditions, we demonstrate that the presence of a burrowing substrate strongly promotes transverse fission. In addition, we show that animal size does not affect fission rates, and that the plane of fission is fixed along the oral-aboral axis of the polyp...
June 2023: Royal Society Open Science
https://read.qxmd.com/read/37315559/spatial-transcriptomics-reveals-a-cnidarian-segment-polarity-program-in-nematostella-vectensis
#25
JOURNAL ARTICLE
Shuonan He, Wanqing Shao, Shiyuan Cynthia Chen, Ting Wang, Matthew C Gibson
During early animal evolution, the emergence of axially polarized segments was central to the diversification of complex bilaterian body plans. Nevertheless, precisely how and when segment polarity pathways arose remains obscure. Here, we demonstrate the molecular basis for segment polarization in developing larvae of the sea anemone Nematostella vectensis. Utilizing spatial transcriptomics, we first constructed a 3D gene expression atlas of developing larval segments. Capitalizing on accurate in silico predictions, we identified Lbx and Uncx, conserved homeodomain-containing genes that occupy opposing subsegmental domains under the control of both bone morphogenetic protein (BMP) signaling and the Hox-Gbx cascade...
July 10, 2023: Current Biology: CB
https://read.qxmd.com/read/37288606/cytoplasmic-polyadenylation-is-an-ancestral-hallmark-of-early-development-in-animals
#26
JOURNAL ARTICLE
Labib Rouhana, Allison Edgar, Fredrik Hugosson, Valeria Dountcheva, Mark Q Martindale, Joseph F Ryan
Differential regulation of gene expression has produced the astonishing diversity of life on Earth. Understanding the origin and evolution of mechanistic innovations for control of gene expression is therefore integral to evolutionary and developmental biology. Cytoplasmic polyadenylation is the biochemical extension of polyadenosine at the 3'-end of cytoplasmic mRNAs. This process regulates the translation of specific maternal transcripts and is mediated by the Cytoplasmic Polyadenylation Element-Binding Protein family (CPEBs)...
June 1, 2023: Molecular Biology and Evolution
https://read.qxmd.com/read/37244953/the-brain-regulatory-program-predates-central-nervous-system-evolution
#27
JOURNAL ARTICLE
Dylan Faltine-Gonzalez, Jamie Havrilak, Michael J Layden
Understanding how brains evolved is critical to determine the origin(s) of centralized nervous systems. Brains are patterned along their anteroposterior axis by stripes of gene expression that appear to be conserved, suggesting brains are homologous. However, the striped expression is also part of the deeply conserved anteroposterior axial program. An emerging hypothesis is that similarities in brain patterning are convergent, arising through the repeated co-option of axial programs. To resolve whether shared brain neuronal programs likely reflect convergence or homology, we investigated the evolution of axial programs in neurogenesis...
May 27, 2023: Scientific Reports
https://read.qxmd.com/read/37238647/unexpected-distribution-of-chitin-and-chitin-synthase-across-soft-bodied-cnidarians
#28
JOURNAL ARTICLE
Lauren E Vandepas, Michael G Tassia, Kenneth M Halanych, Chris T Amemiya
Cnidarians are commonly recognized as sea jellies, corals, or complex colonies such as the Portuguese man-of-war. While some cnidarians possess rigid internal calcareous skeletons (e.g., corals), many are soft-bodied. Intriguingly, genes coding for the chitin-biosynthetic enzyme, chitin synthase (CHS) , were recently identified in the model anemone Nematostella vectensis, a species lacking hard structures. Here we report the prevalence and diversity of CHS across Cnidaria and show that cnidarian chitin synthase genes display diverse protein domain organizations...
April 29, 2023: Biomolecules
https://read.qxmd.com/read/37121433/the-hydra-stem-cell-system-revisited
#29
REVIEW
Thomas W Holstein
Cnidarians are >600 million years old and are considered the sister group of Bilateria based on numerous molecular phylogenetic studies. Apart from Hydra, the genomes of all major clades of Cnidaria have been uncovered (e.g. Aurelia, Clytia, Nematostella and Acropora) and they reveal a remarkable completeness of the metazoan genomic toolbox. Of particular interest is Hydra, a model system of aging research, regenerative biology, and stem cell biology. With the knowledge gained from scRNA research, it is now possible to characterize the expression profiles of all cell types with great precision...
June 2023: Cells & development
https://read.qxmd.com/read/37022138/sensory-conflict-disrupts-circadian-rhythms-in-the-sea-anemone-nematostella-vectensis
#30
JOURNAL ARTICLE
Cory A Berger, Ann M Tarrant
Circadian clocks infer time of day by integrating information from cyclic environmental factors called zeitgebers, including light and temperature. Single zeitgebers entrain circadian rhythms, but few studies have addressed how multiple, simultaneous zeitgeber cycles interact to affect clock behavior. Misalignment between zeitgebers ('sensory conflict') can disrupt circadian rhythms, or alternatively clocks may privilege information from one zeitgeber over another. Here, we show that temperature cycles modulate circadian locomotor rhythms in Nematostella vectensis, a model system for cnidarian circadian biology...
April 6, 2023: ELife
https://read.qxmd.com/read/36990990/muscle-cell-type-diversification-is-driven-by-bhlh-transcription-factor-expansion-and-extensive-effector-gene-duplications
#31
JOURNAL ARTICLE
Alison G Cole, Stefan M Jahnel, Sabrina Kaul, Julia Steger, Julia Hagauer, Andreas Denner, Patricio Ferrer Murguia, Elisabeth Taudes, Bob Zimmermann, Robert Reischl, Patrick R H Steinmetz, Ulrich Technau
Animals are typically composed of hundreds of different cell types, yet mechanisms underlying the emergence of new cell types remain unclear. Here we address the origin and diversification of muscle cells in the non-bilaterian, diploblastic sea anemone Nematostella vectensis. We discern two fast and two slow-contracting muscle cell populations, which differ by extensive sets of paralogous structural protein genes. We find that the regulatory gene set of the slow cnidarian muscles is remarkably similar to the bilaterian cardiac muscle, while the two fast muscles differ substantially from each other in terms of transcription factor profiles, though driving the same set of structural protein genes and having similar physiological characteristics...
March 29, 2023: Nature Communications
https://read.qxmd.com/read/36967200/wnt-signaling-in-whole-body-regeneration
#32
JOURNAL ARTICLE
Christian P Petersen
Regeneration abilities are widespread among animals and select species can restore any body parts removed by wounds that sever the major body axes. This capability of whole-body regeneration as exemplified in flatworm planarians, Acoels, and Cnidarians involves initial responses to injury, the assessment of wound site polarization, determination of missing tissue and programming of blastema fate, and patterned outgrowth to restore axis content and proportionality. Wnt signaling drives many shared and conserved aspects of the biology of whole-body regeneration in the planarian species Schmidtea mediterranea and Dugesia japonica, in the Acoel Hofstenia miamia, and in Cnidarians Hydra and Nematostella...
2023: Current Topics in Developmental Biology
https://read.qxmd.com/read/36940325/associative-learning-in-the-cnidarian-nematostella-vectensis
#33
JOURNAL ARTICLE
Gaelle Botton-Amiot, Pedro Martinez, Simon G Sprecher
The ability to learn and form memories allows animals to adapt their behavior based on previous experiences. Associative learning, the process through which organisms learn about the relationship between two distinct events, has been extensively studied in various animal taxa. However, the existence of associative learning, prior to the emergence of centralized nervous systems in bilaterian animals, remains unclear. Cnidarians such as sea anemones or jellyfish possess a nerve net, which lacks centralization...
March 28, 2023: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/36797294/single-cell-atavism-reveals-an-ancient-mechanism-of-cell-type-diversification-in-a-sea-anemone
#34
JOURNAL ARTICLE
Leslie S Babonis, Camille Enjolras, Abigail J Reft, Brent M Foster, Fredrik Hugosson, Joseph F Ryan, Marymegan Daly, Mark Q Martindale
Cnidocytes are the explosive stinging cells unique to cnidarians (corals, jellyfish, etc). Specialized for prey capture and defense, cnidocytes comprise a group of over 30 morphologically and functionally distinct cell types. These unusual cells are iconic examples of biological novelty but the developmental mechanisms driving diversity of the stinging apparatus are poorly characterized, making it challenging to understand the evolutionary history of stinging cells. Using CRISPR/Cas9-mediated genome editing in the sea anemone Nematostella vectensis, we show that a single transcription factor (NvSox2) acts as a binary switch between two alternative stinging cell fates...
February 16, 2023: Nature Communications
https://read.qxmd.com/read/36785246/oblique-plane-microscope-for-mesoscopic-imaging-of-freely-moving-organisms-with-cellular-resolution
#35
JOURNAL ARTICLE
Rajwinder Singh, Kaushikaram Subramanian, Rory M Power, Alexandre Paix, Alejandro Gil, Aissam Ikmi, Robert Prevedel
Several important questions in biology require non-invasive and three-dimensional imaging techniques with an appropriate spatiotemporal resolution that permits live organisms to move in an unconstrained fashion over an extended field-of-view. While selective-plane illumination microscopy (SPIM) has emerged as a powerful method to observe live biological specimens at high spatio-temporal resolution, typical implementations often necessitate constraining sample mounting or lack the required volumetric speed. Here, we report on an open-top, dual-objective oblique plane microscope (OPM) capable of observing millimeter-sized, freely moving animals at cellular resolution...
January 16, 2023: Optics Express
https://read.qxmd.com/read/36747872/environmental-and-molecular-regulation-of-asexual-reproduction-in-the-sea-anemone-nematostella-vectensis
#36
Layla Al-Shaer, Whitney Leach, Noor Baban, Mia Yagodich, Mathew C Gibson, Michael J Layden
Cnidarians exhibit incredible reproductive diversity, with most capable of sexual and asexual reproduction. Here we investigate factors that influence asexual reproduction in the burrowing sea anemone Nematostella vectensis , which can propagate asexually by transverse fission of the body column. By altering culture conditions, we demonstrate that the presence of a burrowing substrate strongly promotes transverse fission. In addition, we show that animal size does not affect fission rates, and that the plane of fission is fixed along the oral-aboral axis of the polyp...
January 27, 2023: bioRxiv
https://read.qxmd.com/read/36716103/parental-exposure-to-ocean-acidification-impacts-gamete-production-and-physiology-but-not-offspring-performance-in-nematostella-vectensis
#37
JOURNAL ARTICLE
Benjamin H Glass, Angela H Schmitt, Kristen T Brown, Kelsey F Speer, Katie L Barott
Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. Here, we examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. Females exhibited reproductive plasticity under acidic conditions, releasing significantly fewer but larger eggs compared to ambient females after four weeks of exposure, and larger eggs in two of the four following spawning cycles despite recovering fecundity, indicating long-term acclimatization and greater investment in eggs...
January 30, 2023: Biology Open
https://read.qxmd.com/read/36711919/spatial-transcriptomics-reveals-a-conserved-segment-polarity-program-that-governs-muscle-patterning-in-nematostella-vectensis
#38
Shuonan He, Wanqing Shao, Shiyuan Cynthia Chen, Ting Wang, Matthew C Gibson
UNLABELLED: During early animal evolution, the emergence of axially-polarized segments was central to the diversification of complex bilaterian body plans. Nevertheless, precisely how and when segment polarity pathways arose remains obscure. Here we demonstrate the molecular basis for segment polarization in developing larvae of the pre-bilaterian sea anemone Nematostella vectensis . Utilizing spatial transcriptomics, we first constructed a 3-D gene expression atlas of developing larval segments...
January 10, 2023: bioRxiv
https://read.qxmd.com/read/36689558/genotype-environment-interactions-determine-microbiota-plasticity-in-the-sea-anemone-nematostella-vectensis
#39
JOURNAL ARTICLE
Laura Baldassarre, Adam M Reitzel, Sebastian Fraune
Most multicellular organisms harbor microbial colonizers that provide various benefits to their hosts. Although these microbial communities may be host species- or even genotype-specific, the associated bacterial communities can respond plastically to environmental changes. In this study, we estimated the relative contribution of environment and host genotype to bacterial community composition in Nematostella vectensis, an estuarine cnidarian. We sampled N. vectensis polyps from 5 different populations along a north-south gradient on the Atlantic coast of the United States and Canada...
January 23, 2023: PLoS Biology
https://read.qxmd.com/read/36669828/genome-scale-analysis-reveals-extensive-diversification-of-voltage-gated-k-channels-in-stem-cnidarians
#40
JOURNAL ARTICLE
Adolfo Lara, Benjamin T Simonson, Joseph F Ryan, Timothy Jegla
Ion channels are highly diverse in the cnidarian model organism Nematostella vectensis (Anthozoa), but little is known about the evolutionary origins of this channel diversity and its conservation across Cnidaria. Here we examined the evolution of voltage-gated K+ channels in Cnidaria by comparing genomes and transcriptomes of diverse cnidarian species from Anthozoa and Medusozoa. We found an average of over 40 voltage-gated K+ channel genes per species, and phylogenetic reconstruction of the Kv, KCNQ and EAG gene families identified 28 voltage-gated K+ channels present in the last common ancestor of Anthozoa and Medusozoa (23 Kv, 1 KCNQ and 4 EAG)...
January 21, 2023: Genome Biology and Evolution
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